EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

Orthologs

Description

Ensembl ID: ENSGALG00000030824 (Gene tree)
Gene ID: 769794
Gene Symbol: SF3B5
Alias: -
Full Name: Gallus gallus splicing factor 3b subunit 5 (SF3B5)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 905 bases
Position: chr3:45974680-45975584
Accession: NM_001302090
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000048790	SF3b10	PF07189.11	2.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download ENSGALG00000030824's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000030824	SF3B5	100	97.674	ENSG00000169976	SF3B5	100	97.674	Homo_sapiens
ENSGALG00000030824	SF3B5	100	91.860	ENSAPOG00000001721	sf3b5	100	91.860	Acanthochromis_polyacanthus
ENSGALG00000030824	SF3B5	100	94.186	ENSACIG00000008106	sf3b5	100	94.186	Amphilophus_citrinellus
ENSGALG00000030824	SF3B5	100	91.860	ENSAOCG00000023367	sf3b5	100	91.860	Amphiprion_ocellaris
ENSGALG00000030824	SF3B5	100	91.860	ENSAPEG00000004605	sf3b5	100	91.860	Amphiprion_percula
ENSGALG00000030824	SF3B5	100	93.023	ENSATEG00000009720	sf3b5	100	93.023	Anabas_testudineus
ENSGALG00000030824	SF3B5	100	98.837	ENSACAG00000007948	SF3B5	100	98.837	Anolis_carolinensis
ENSGALG00000030824	SF3B5	100	97.674	ENSANAG00000019999	SF3B5	100	97.674	Aotus_nancymaae
ENSGALG00000030824	SF3B5	100	94.186	ENSACLG00000022410	sf3b5	100	94.186	Astatotilapia_calliptera
ENSGALG00000030824	SF3B5	100	97.674	ENSBTAG00000009795	SF3B5	100	97.674	Bos_taurus
ENSGALG00000030824	SF3B5	100	97.674	ENSCJAG00000046566	SF3B5	100	97.674	Callithrix_jacchus
ENSGALG00000030824	SF3B5	100	97.674	ENSCAFG00000032495	SF3B5	100	97.674	Canis_familiaris
ENSGALG00000030824	SF3B5	100	97.674	ENSCAFG00020000873	SF3B5	100	97.674	Canis_lupus_dingo
ENSGALG00000030824	SF3B5	100	97.674	ENSCHIG00000007987	SF3B5	100	97.674	Capra_hircus
ENSGALG00000030824	SF3B5	100	97.674	ENSTSYG00000012236	SF3B5	100	97.674	Carlito_syrichta
ENSGALG00000030824	SF3B5	100	97.674	ENSCPOG00000012435	SF3B5	100	97.674	Cavia_porcellus
ENSGALG00000030824	SF3B5	100	97.674	ENSCCAG00000006528	SF3B5	100	97.674	Cebus_capucinus
ENSGALG00000030824	SF3B5	100	97.674	ENSCATG00000010192	SF3B5	100	97.674	Cercocebus_atys
ENSGALG00000030824	SF3B5	100	97.674	ENSCLAG00000017802	SF3B5	100	97.674	Chinchilla_lanigera
ENSGALG00000030824	SF3B5	100	97.674	ENSCSAG00000000187	SF3B5	100	97.674	Chlorocebus_sabaeus
ENSGALG00000030824	SF3B5	100	98.837	ENSCPBG00000017148	SF3B5	100	98.837	Chrysemys_picta_bellii
ENSGALG00000030824	SF3B5	98	75.000	ENSCING00000021953	-	98	75.000	Ciona_intestinalis
ENSGALG00000030824	SF3B5	100	97.674	ENSCANG00000002639	SF3B5	100	97.674	Colobus_angolensis_palliatus
ENSGALG00000030824	SF3B5	100	96.512	ENSCGRG00001007249	Sf3b5	100	96.512	Cricetulus_griseus_chok1gshd
ENSGALG00000030824	SF3B5	100	96.512	ENSCGRG00000019185	Sf3b5	100	96.512	Cricetulus_griseus_crigri
ENSGALG00000030824	SF3B5	100	94.186	ENSCSEG00000003216	sf3b5	100	94.186	Cynoglossus_semilaevis
ENSGALG00000030824	SF3B5	100	93.023	ENSCVAG00000005040	sf3b5	100	93.023	Cyprinodon_variegatus
ENSGALG00000030824	SF3B5	100	93.023	ENSDARG00000016855	sf3b5	100	93.023	Danio_rerio
ENSGALG00000030824	SF3B5	100	97.674	ENSDNOG00000048829	SF3B5	82	97.674	Dasypus_novemcinctus
ENSGALG00000030824	SF3B5	100	97.674	ENSDORG00000005838	Sf3b5	100	97.674	Dipodomys_ordii
ENSGALG00000030824	SF3B5	95	85.366	FBgn0040534	Sf3b5	96	85.366	Drosophila_melanogaster
ENSGALG00000030824	SF3B5	100	97.674	ENSETEG00000004047	SF3B5	100	97.674	Echinops_telfairi
ENSGALG00000030824	SF3B5	99	83.529	ENSEBUG00000002311	sf3b5	100	83.529	Eptatretus_burgeri
ENSGALG00000030824	SF3B5	100	97.674	ENSEASG00005009522	SF3B5	100	97.674	Equus_asinus_asinus
ENSGALG00000030824	SF3B5	100	97.674	ENSECAG00000005457	SF3B5	100	97.674	Equus_caballus
ENSGALG00000030824	SF3B5	100	91.860	ENSELUG00000014290	SF3B5	100	91.860	Esox_lucius
ENSGALG00000030824	SF3B5	100	97.674	ENSFCAG00000000936	SF3B5	100	97.674	Felis_catus
ENSGALG00000030824	SF3B5	100	97.674	ENSFALG00000015012	SF3B5	100	97.674	Ficedula_albicollis
ENSGALG00000030824	SF3B5	100	97.674	ENSFDAG00000003664	SF3B5	100	97.674	Fukomys_damarensis
ENSGALG00000030824	SF3B5	100	93.023	ENSFHEG00000020301	sf3b5	100	93.023	Fundulus_heteroclitus
ENSGALG00000030824	SF3B5	100	93.023	ENSGMOG00000019972	sf3b5	100	93.023	Gadus_morhua
ENSGALG00000030824	SF3B5	100	93.023	ENSGAFG00000000271	sf3b5	100	93.023	Gambusia_affinis
ENSGALG00000030824	SF3B5	100	93.023	ENSGACG00000010363	sf3b5	100	93.023	Gasterosteus_aculeatus
ENSGALG00000030824	SF3B5	100	98.837	ENSGAGG00000011434	SF3B5	100	98.837	Gopherus_agassizii
ENSGALG00000030824	SF3B5	100	93.023	ENSGAGG00000000646	-	100	93.023	Gopherus_agassizii
ENSGALG00000030824	SF3B5	100	97.674	ENSGGOG00000001537	SF3B5	100	97.674	Gorilla_gorilla
ENSGALG00000030824	SF3B5	100	94.186	ENSHBUG00000008925	sf3b5	100	94.186	Haplochromis_burtoni
ENSGALG00000030824	SF3B5	100	97.674	ENSHGLG00000021406	SF3B5	100	97.674	Heterocephalus_glaber_female
ENSGALG00000030824	SF3B5	100	97.674	ENSHGLG00100020370	SF3B5	100	97.674	Heterocephalus_glaber_male
ENSGALG00000030824	SF3B5	100	91.860	ENSHCOG00000016806	sf3b5	100	91.860	Hippocampus_comes
ENSGALG00000030824	SF3B5	100	91.860	ENSHCOG00000016802	sf3b5	100	91.860	Hippocampus_comes
ENSGALG00000030824	SF3B5	100	91.860	ENSHCOG00000009115	-	100	91.860	Hippocampus_comes
ENSGALG00000030824	SF3B5	100	93.023	ENSIPUG00000015166	sf3b5	100	93.023	Ictalurus_punctatus
ENSGALG00000030824	SF3B5	100	97.674	ENSSTOG00000003347	SF3B5	100	97.674	Ictidomys_tridecemlineatus
ENSGALG00000030824	SF3B5	100	97.674	ENSJJAG00000001857	Sf3b5	100	97.674	Jaculus_jaculus
ENSGALG00000030824	SF3B5	100	93.023	ENSKMAG00000002249	sf3b5	100	93.023	Kryptolebias_marmoratus
ENSGALG00000030824	SF3B5	100	93.023	ENSLBEG00000019847	sf3b5	100	93.023	Labrus_bergylta
ENSGALG00000030824	SF3B5	100	95.349	ENSLACG00000000946	SF3B5	100	95.349	Latimeria_chalumnae
ENSGALG00000030824	SF3B5	100	94.186	ENSLOCG00000017352	sf3b5	100	94.186	Lepisosteus_oculatus
ENSGALG00000030824	SF3B5	100	97.674	ENSLAFG00000032489	SF3B5	100	97.674	Loxodonta_africana
ENSGALG00000030824	SF3B5	100	97.674	ENSMFAG00000029753	SF3B5	100	97.674	Macaca_fascicularis
ENSGALG00000030824	SF3B5	100	97.674	ENSMMUG00000047691	SF3B5	100	97.674	Macaca_mulatta
ENSGALG00000030824	SF3B5	100	97.674	ENSMNEG00000028236	SF3B5	100	97.674	Macaca_nemestrina
ENSGALG00000030824	SF3B5	100	97.674	ENSMLEG00000007622	SF3B5	100	97.674	Mandrillus_leucophaeus
ENSGALG00000030824	SF3B5	100	94.186	ENSMAMG00000021639	sf3b5	100	94.186	Mastacembelus_armatus
ENSGALG00000030824	SF3B5	100	94.186	ENSMZEG00005027408	sf3b5	100	94.186	Maylandia_zebra
ENSGALG00000030824	SF3B5	100	82.558	ENSMZEG00005027407	sf3b5	100	82.558	Maylandia_zebra
ENSGALG00000030824	SF3B5	100	94.186	ENSMZEG00005028115	SF3B5	100	94.186	Maylandia_zebra
ENSGALG00000030824	SF3B5	100	100.000	ENSMGAG00000015849	SF3B5	100	100.000	Meleagris_gallopavo
ENSGALG00000030824	SF3B5	100	96.512	ENSMAUG00000008283	Sf3b5	100	96.512	Mesocricetus_auratus
ENSGALG00000030824	SF3B5	100	97.674	ENSMICG00000014922	SF3B5	100	97.674	Microcebus_murinus
ENSGALG00000030824	SF3B5	100	96.512	ENSMOCG00000001713	Sf3b5	100	96.512	Microtus_ochrogaster
ENSGALG00000030824	SF3B5	100	94.186	ENSMMOG00000007956	sf3b5	100	94.186	Mola_mola
ENSGALG00000030824	SF3B5	100	97.674	ENSMODG00000023291	SF3B5	83	97.674	Monodelphis_domestica
ENSGALG00000030824	SF3B5	91	91.358	ENSMALG00000020357	sf3b5	99	91.358	Monopterus_albus
ENSGALG00000030824	SF3B5	100	96.512	MGP_CAROLIEiJ_G0015120	Sf3b5	100	96.512	Mus_caroli
ENSGALG00000030824	SF3B5	100	96.512	ENSMUSG00000078348	Sf3b5	100	96.512	Mus_musculus
ENSGALG00000030824	SF3B5	100	96.512	MGP_PahariEiJ_G0023739	Sf3b5	100	96.512	Mus_pahari
ENSGALG00000030824	SF3B5	100	96.512	MGP_SPRETEiJ_G0015928	Sf3b5	100	96.512	Mus_spretus
ENSGALG00000030824	SF3B5	100	97.674	ENSMPUG00000018379	SF3B5	100	97.674	Mustela_putorius_furo
ENSGALG00000030824	SF3B5	93	95.000	ENSMLUG00000025546	-	93	95.000	Myotis_lucifugus
ENSGALG00000030824	SF3B5	100	97.674	ENSMLUG00000028504	-	100	97.674	Myotis_lucifugus
ENSGALG00000030824	SF3B5	100	93.023	ENSMLUG00000010802	-	100	93.023	Myotis_lucifugus
ENSGALG00000030824	SF3B5	100	97.674	ENSNGAG00000010732	Sf3b5	100	97.674	Nannospalax_galili
ENSGALG00000030824	SF3B5	100	94.186	ENSNBRG00000014383	sf3b5	100	94.186	Neolamprologus_brichardi
ENSGALG00000030824	SF3B5	100	97.674	ENSNLEG00000019307	SF3B5	100	97.674	Nomascus_leucogenys
ENSGALG00000030824	SF3B5	100	97.674	ENSMEUG00000005445	-	100	97.674	Notamacropus_eugenii
ENSGALG00000030824	SF3B5	100	97.674	ENSMEUG00000005440	-	100	97.674	Notamacropus_eugenii
ENSGALG00000030824	SF3B5	100	98.837	ENSOPRG00000015107	SF3B5	100	98.837	Ochotona_princeps
ENSGALG00000030824	SF3B5	100	97.674	ENSODEG00000019507	SF3B5	100	97.674	Octodon_degus
ENSGALG00000030824	SF3B5	100	94.186	ENSONIG00000020725	sf3b5	100	94.186	Oreochromis_niloticus
ENSGALG00000030824	SF3B5	69	96.610	ENSOANG00000015301	SF3B5	97	96.610	Ornithorhynchus_anatinus
ENSGALG00000030824	SF3B5	100	97.674	ENSOCUG00000008752	SF3B5	100	97.674	Oryctolagus_cuniculus
ENSGALG00000030824	SF3B5	100	95.349	ENSORLG00000004925	sf3b5	100	95.349	Oryzias_latipes
ENSGALG00000030824	SF3B5	100	95.349	ENSORLG00020011625	sf3b5	100	95.349	Oryzias_latipes_hni
ENSGALG00000030824	SF3B5	100	95.349	ENSORLG00015017061	sf3b5	100	95.349	Oryzias_latipes_hsok
ENSGALG00000030824	SF3B5	100	95.349	ENSOMEG00000010620	sf3b5	100	95.349	Oryzias_melastigma
ENSGALG00000030824	SF3B5	100	97.674	ENSOGAG00000012152	SF3B5	100	97.674	Otolemur_garnettii
ENSGALG00000030824	SF3B5	92	98.734	ENSOARG00000019486	-	95	98.734	Ovis_aries
ENSGALG00000030824	SF3B5	100	94.186	ENSOARG00000002617	SF3B5	100	94.186	Ovis_aries
ENSGALG00000030824	SF3B5	100	97.674	ENSPPAG00000012940	SF3B5	100	97.674	Pan_paniscus
ENSGALG00000030824	SF3B5	100	97.674	ENSPPRG00000021262	SF3B5	100	97.674	Panthera_pardus
ENSGALG00000030824	SF3B5	100	97.674	ENSPTIG00000001952	SF3B5	100	97.674	Panthera_tigris_altaica
ENSGALG00000030824	SF3B5	100	97.674	ENSPTRG00000018676	SF3B5	100	97.674	Pan_troglodytes
ENSGALG00000030824	SF3B5	100	97.674	ENSPANG00000034242	SF3B5	100	97.674	Papio_anubis
ENSGALG00000030824	SF3B5	100	94.186	ENSPKIG00000006057	sf3b5	100	94.186	Paramormyrops_kingsleyae
ENSGALG00000030824	SF3B5	100	98.837	ENSPSIG00000001262	SF3B5	100	98.837	Pelodiscus_sinensis
ENSGALG00000030824	SF3B5	100	91.860	ENSPMGG00000014804	sf3b5	100	91.860	Periophthalmus_magnuspinnatus
ENSGALG00000030824	SF3B5	100	96.512	ENSPEMG00000012931	Sf3b5	100	96.512	Peromyscus_maniculatus_bairdii
ENSGALG00000030824	SF3B5	100	88.372	ENSPMAG00000010296	sf3b5	100	88.372	Petromyzon_marinus
ENSGALG00000030824	SF3B5	100	76.744	ENSPCIG00000025007	-	100	76.744	Phascolarctos_cinereus
ENSGALG00000030824	SF3B5	93	100.000	ENSPCIG00000011344	-	78	100.000	Phascolarctos_cinereus
ENSGALG00000030824	SF3B5	100	93.023	ENSPFOG00000019994	sf3b5	100	93.023	Poecilia_formosa
ENSGALG00000030824	SF3B5	100	93.023	ENSPLAG00000008412	sf3b5	100	93.023	Poecilia_latipinna
ENSGALG00000030824	SF3B5	100	93.023	ENSPMEG00000020050	sf3b5	100	93.023	Poecilia_mexicana
ENSGALG00000030824	SF3B5	100	93.023	ENSPREG00000009242	sf3b5	100	93.023	Poecilia_reticulata
ENSGALG00000030824	SF3B5	100	97.674	ENSPPYG00000017068	SF3B5	100	97.674	Pongo_abelii
ENSGALG00000030824	SF3B5	100	97.674	ENSPCAG00000009332	SF3B5	100	97.674	Procavia_capensis
ENSGALG00000030824	SF3B5	100	97.674	ENSPCOG00000013754	SF3B5	100	97.674	Propithecus_coquereli
ENSGALG00000030824	SF3B5	56	100.000	ENSPVAG00000002820	SF3B5	100	100.000	Pteropus_vampyrus
ENSGALG00000030824	SF3B5	100	94.186	ENSPNYG00000002075	sf3b5	100	94.186	Pundamilia_nyererei
ENSGALG00000030824	SF3B5	100	94.186	ENSPNAG00000004942	sf3b5	100	94.186	Pygocentrus_nattereri
ENSGALG00000030824	SF3B5	100	96.512	ENSRNOG00000014908	Sf3b5	100	96.512	Rattus_norvegicus
ENSGALG00000030824	SF3B5	100	97.674	ENSRBIG00000006301	SF3B5	100	97.674	Rhinopithecus_bieti
ENSGALG00000030824	SF3B5	100	97.674	ENSRROG00000037067	SF3B5	100	97.674	Rhinopithecus_roxellana
ENSGALG00000030824	SF3B5	100	97.674	ENSSBOG00000006122	SF3B5	100	97.674	Saimiri_boliviensis_boliviensis
ENSGALG00000030824	SF3B5	100	96.512	ENSSHAG00000015670	SF3B5	100	96.512	Sarcophilus_harrisii
ENSGALG00000030824	SF3B5	100	95.349	ENSSFOG00015015767	sf3b5	100	95.349	Scleropages_formosus
ENSGALG00000030824	SF3B5	100	91.860	ENSSMAG00000018852	sf3b5	100	91.860	Scophthalmus_maximus
ENSGALG00000030824	SF3B5	100	93.023	ENSSDUG00000018161	sf3b5	100	93.023	Seriola_dumerili
ENSGALG00000030824	SF3B5	100	93.023	ENSSLDG00000014547	sf3b5	100	93.023	Seriola_lalandi_dorsalis
ENSGALG00000030824	SF3B5	100	97.674	ENSSARG00000007820	SF3B5	100	97.674	Sorex_araneus
ENSGALG00000030824	SF3B5	100	91.860	ENSSPAG00000009244	sf3b5	100	91.860	Stegastes_partitus
ENSGALG00000030824	SF3B5	100	91.860	ENSSPAG00000017371	-	100	91.860	Stegastes_partitus
ENSGALG00000030824	SF3B5	100	97.674	ENSSSCG00000035578	SF3B5	100	97.674	Sus_scrofa
ENSGALG00000030824	SF3B5	100	100.000	ENSTGUG00000010810	SF3B5	100	100.000	Taeniopygia_guttata
ENSGALG00000030824	SF3B5	100	93.023	ENSTRUG00000005577	sf3b5	100	93.023	Takifugu_rubripes
ENSGALG00000030824	SF3B5	100	93.023	ENSTNIG00000001265	sf3b5	100	93.023	Tetraodon_nigroviridis
ENSGALG00000030824	SF3B5	100	96.512	ENSTBEG00000003072	SF3B5	100	96.512	Tupaia_belangeri
ENSGALG00000030824	SF3B5	100	97.674	ENSTTRG00000008817	SF3B5	100	97.674	Tursiops_truncatus
ENSGALG00000030824	SF3B5	100	97.674	ENSUAMG00000027296	SF3B5	100	97.674	Ursus_americanus
ENSGALG00000030824	SF3B5	100	97.674	ENSUMAG00000005448	SF3B5	100	97.674	Ursus_maritimus
ENSGALG00000030824	SF3B5	100	97.674	ENSVPAG00000003826	SF3B5	100	97.674	Vicugna_pacos
ENSGALG00000030824	SF3B5	100	97.674	ENSVVUG00000004703	SF3B5	100	97.674	Vulpes_vulpes
ENSGALG00000030824	SF3B5	100	97.674	ENSXETG00000021409	sf3b5	100	97.674	Xenopus_tropicalis
ENSGALG00000030824	SF3B5	100	93.023	ENSXMAG00000019971	sf3b5	100	93.023	Xiphophorus_maculatus