EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000031238 (Gene tree)
Gene ID: 772054
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 3028 bases
Position: chr5:39564609-39567636
Accession: 772054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000048469	RRM_1	PF00076.22	1.7e-14	1	1
ENSGALP00000045556	RRM_1	PF00076.22	1.8e-14	1	1
ENSGALP00000061256	RRM_1	PF00076.22	3.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000087710	SLIRP-201	380	-	ENSGALP00000061256	95 (aa)	-	A0A1L1RR29
ENSGALT00000061833	SLIRP-203	493	-	ENSGALP00000048469	99 (aa)	-	A0A1D5P6Y8
ENSGALT00000055042	SLIRP-202	830	-	ENSGALP00000045556	104 (aa)	XP_001235249	A0A1D5P6Y8

Gene Model

Click here to download ENSGALG00000031238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000031238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000031238	SLIRP	73	56.522	ENSG00000119705	SLIRP	88	55.224	Homo_sapiens
ENSGALG00000031238	SLIRP	86	52.809	ENSAPOG00000001298	slirp	89	52.809	Acanthochromis_polyacanthus
ENSGALG00000031238	SLIRP	87	51.765	ENSAMEG00000003975	SLIRP	89	50.617	Ailuropoda_melanoleuca
ENSGALG00000031238	SLIRP	97	54.167	ENSACIG00000023083	slirp	94	54.167	Amphilophus_citrinellus
ENSGALG00000031238	SLIRP	95	51.064	ENSAOCG00000006342	slirp	93	51.064	Amphiprion_ocellaris
ENSGALG00000031238	SLIRP	95	51.064	ENSAPEG00000015719	-	94	51.064	Amphiprion_percula
ENSGALG00000031238	SLIRP	95	51.064	ENSAPEG00000015917	slirp	93	51.064	Amphiprion_percula
ENSGALG00000031238	SLIRP	92	57.143	ENSATEG00000013525	slirp	90	57.143	Anabas_testudineus
ENSGALG00000031238	SLIRP	87	48.837	ENSAMXG00000018693	slirp	84	48.837	Astyanax_mexicanus
ENSGALG00000031238	SLIRP	89	49.412	ENSCJAG00000016946	SLIRP	84	50.000	Callithrix_jacchus
ENSGALG00000031238	SLIRP	88	48.936	ENSCAFG00020015876	-	67	52.632	Canis_lupus_dingo
ENSGALG00000031238	SLIRP	89	47.059	ENSCCAG00000030130	SLIRP	78	46.429	Cebus_capucinus
ENSGALG00000031238	SLIRP	100	46.296	ENSCATG00000036327	SLIRP	79	52.809	Cercocebus_atys
ENSGALG00000031238	SLIRP	71	58.209	ENSCSAG00000011736	SLIRP	78	50.588	Chlorocebus_sabaeus
ENSGALG00000031238	SLIRP	88	58.333	ENSCPBG00000026327	SLIRP	86	60.465	Chrysemys_picta_bellii
ENSGALG00000031238	SLIRP	71	56.716	ENSCANG00000032892	SLIRP	80	52.564	Colobus_angolensis_palliatus
ENSGALG00000031238	SLIRP	71	50.746	ENSCGRG00001024068	Slirp	65	47.222	Cricetulus_griseus_chok1gshd
ENSGALG00000031238	SLIRP	71	50.746	ENSCGRG00000017440	Slirp	65	47.222	Cricetulus_griseus_crigri
ENSGALG00000031238	SLIRP	92	47.253	ENSCSEG00000015766	slirp	93	47.253	Cynoglossus_semilaevis
ENSGALG00000031238	SLIRP	78	60.811	ENSCVAG00000012504	slirp	77	58.974	Cyprinodon_variegatus
ENSGALG00000031238	SLIRP	90	58.427	ENSDARG00000097753	slirp	89	57.447	Danio_rerio
ENSGALG00000031238	SLIRP	71	53.731	ENSDNOG00000007721	SLIRP	75	49.398	Dasypus_novemcinctus
ENSGALG00000031238	SLIRP	74	50.685	ENSDORG00000012379	Slirp	67	50.000	Dipodomys_ordii
ENSGALG00000031238	SLIRP	74	57.534	ENSETEG00000010345	SLIRP	79	54.118	Echinops_telfairi
ENSGALG00000031238	SLIRP	74	54.795	ENSEASG00005020193	SLIRP	67	54.054	Equus_asinus_asinus
ENSGALG00000031238	SLIRP	85	51.190	ENSEEUG00000007257	SLIRP	83	51.190	Erinaceus_europaeus
ENSGALG00000031238	SLIRP	95	54.255	ENSELUG00000016800	slirp	91	54.255	Esox_lucius
ENSGALG00000031238	SLIRP	84	49.398	ENSFCAG00000036326	SLIRP	85	49.398	Felis_catus
ENSGALG00000031238	SLIRP	78	89.189	ENSFALG00000012583	SLIRP	92	78.788	Ficedula_albicollis
ENSGALG00000031238	SLIRP	77	48.684	ENSFDAG00000008347	SLIRP	67	48.684	Fukomys_damarensis
ENSGALG00000031238	SLIRP	67	58.571	ENSFHEG00000004709	slirp	76	58.571	Fundulus_heteroclitus
ENSGALG00000031238	SLIRP	99	43.878	ENSGMOG00000016948	slirp	92	43.878	Gadus_morhua
ENSGALG00000031238	SLIRP	85	56.818	ENSGAFG00000010998	slirp	88	56.818	Gambusia_affinis
ENSGALG00000031238	SLIRP	85	53.086	ENSGACG00000020137	slirp	90	55.844	Gasterosteus_aculeatus
ENSGALG00000031238	SLIRP	100	55.000	ENSGAGG00000009953	SLIRP	69	55.000	Gopherus_agassizii
ENSGALG00000031238	SLIRP	73	56.522	ENSGGOG00000011059	-	85	53.165	Gorilla_gorilla
ENSGALG00000031238	SLIRP	82	48.148	ENSHGLG00000018491	SLIRP	71	48.148	Heterocephalus_glaber_female
ENSGALG00000031238	SLIRP	82	48.148	ENSHGLG00100014153	SLIRP	71	48.148	Heterocephalus_glaber_male
ENSGALG00000031238	SLIRP	93	55.208	ENSHCOG00000006795	slirp	96	55.208	Hippocampus_comes
ENSGALG00000031238	SLIRP	85	57.955	ENSIPUG00000010214	SLIRP	88	57.955	Ictalurus_punctatus
ENSGALG00000031238	SLIRP	71	55.224	ENSSTOG00000034316	SLIRP	67	51.351	Ictidomys_tridecemlineatus
ENSGALG00000031238	SLIRP	78	59.459	ENSKMAG00000002038	slirp	75	57.692	Kryptolebias_marmoratus
ENSGALG00000031238	SLIRP	96	49.474	ENSLBEG00000007564	slirp	93	49.474	Labrus_bergylta
ENSGALG00000031238	SLIRP	95	54.255	ENSLACG00000013434	SLIRP	88	54.255	Latimeria_chalumnae
ENSGALG00000031238	SLIRP	78	57.692	ENSMFAG00000042960	SLIRP	79	53.933	Macaca_fascicularis
ENSGALG00000031238	SLIRP	74	57.143	ENSMMUG00000029256	SLIRP	72	58.209	Macaca_mulatta
ENSGALG00000031238	SLIRP	78	57.692	ENSMNEG00000028921	SLIRP	79	53.933	Macaca_nemestrina
ENSGALG00000031238	SLIRP	89	55.056	ENSMLEG00000043644	SLIRP	79	52.809	Mandrillus_leucophaeus
ENSGALG00000031238	SLIRP	85	59.091	ENSMZEG00005004617	slirp	89	59.091	Maylandia_zebra
ENSGALG00000031238	SLIRP	87	46.429	ENSMAUG00000003857	Slirp	68	46.053	Mesocricetus_auratus
ENSGALG00000031238	SLIRP	89	51.724	ENSMICG00000012080	SLIRP	76	49.383	Microcebus_murinus
ENSGALG00000031238	SLIRP	80	47.368	ENSMOCG00000016019	Slirp	75	47.368	Microtus_ochrogaster
ENSGALG00000031238	SLIRP	95	52.128	ENSMMOG00000018268	slirp	92	52.128	Mola_mola
ENSGALG00000031238	SLIRP	72	52.941	ENSMODG00000005207	-	97	52.174	Monodelphis_domestica
ENSGALG00000031238	SLIRP	78	63.514	ENSMALG00000012581	slirp	80	61.538	Monopterus_albus
ENSGALG00000031238	SLIRP	100	42.424	MGP_CAROLIEiJ_G0017995	Slirp	92	42.424	Mus_caroli
ENSGALG00000031238	SLIRP	83	50.000	ENSMUSG00000021040	Slirp	83	50.000	Mus_musculus
ENSGALG00000031238	SLIRP	88	44.828	MGP_SPRETEiJ_G0018840	Slirp	78	44.828	Mus_spretus
ENSGALG00000031238	SLIRP	77	52.632	ENSMLUG00000029544	-	68	52.632	Myotis_lucifugus
ENSGALG00000031238	SLIRP	78	50.649	ENSMLUG00000024998	-	69	50.649	Myotis_lucifugus
ENSGALG00000031238	SLIRP	85	46.988	ENSNGAG00000016363	Slirp	84	45.977	Nannospalax_galili
ENSGALG00000031238	SLIRP	86	51.765	ENSNLEG00000027238	-	92	53.750	Nomascus_leucogenys
ENSGALG00000031238	SLIRP	89	54.023	ENSNLEG00000032459	-	85	53.165	Nomascus_leucogenys
ENSGALG00000031238	SLIRP	91	47.674	ENSODEG00000012580	SLIRP	76	51.429	Octodon_degus
ENSGALG00000031238	SLIRP	95	54.255	ENSONIG00000011692	slirp	93	54.255	Oreochromis_niloticus
ENSGALG00000031238	SLIRP	83	54.878	ENSOANG00000022366	SLIRP	74	54.878	Ornithorhynchus_anatinus
ENSGALG00000031238	SLIRP	95	51.064	ENSORLG00000010761	slirp	71	51.064	Oryzias_latipes
ENSGALG00000031238	SLIRP	95	50.000	ENSORLG00020022188	slirp	92	50.000	Oryzias_latipes_hni
ENSGALG00000031238	SLIRP	89	53.261	ENSORLG00015020171	slirp	91	53.261	Oryzias_latipes_hsok
ENSGALG00000031238	SLIRP	95	51.064	ENSOMEG00000019321	slirp	92	51.064	Oryzias_melastigma
ENSGALG00000031238	SLIRP	73	56.522	ENSPPAG00000040710	-	85	53.165	Pan_paniscus
ENSGALG00000031238	SLIRP	84	49.398	ENSPPRG00000014350	SLIRP	85	49.398	Panthera_pardus
ENSGALG00000031238	SLIRP	84	49.398	ENSPTIG00000014196	SLIRP	85	49.398	Panthera_tigris_altaica
ENSGALG00000031238	SLIRP	73	56.522	ENSPTRG00000030691	SLIRP	85	53.165	Pan_troglodytes
ENSGALG00000031238	SLIRP	91	55.556	ENSPANG00000026323	SLIRP	90	43.878	Papio_anubis
ENSGALG00000031238	SLIRP	60	61.404	ENSPKIG00000008831	slirp	59	60.000	Paramormyrops_kingsleyae
ENSGALG00000031238	SLIRP	78	60.811	ENSPMGG00000010541	slirp	86	60.000	Periophthalmus_magnuspinnatus
ENSGALG00000031238	SLIRP	78	47.297	ENSPEMG00000013234	Slirp	73	47.297	Peromyscus_maniculatus_bairdii
ENSGALG00000031238	SLIRP	83	45.122	ENSPMAG00000009355	slirp	93	46.429	Petromyzon_marinus
ENSGALG00000031238	SLIRP	86	51.190	ENSPCIG00000026842	-	80	52.703	Phascolarctos_cinereus
ENSGALG00000031238	SLIRP	85	57.955	ENSPFOG00000006758	slirp	88	57.955	Poecilia_formosa
ENSGALG00000031238	SLIRP	85	57.955	ENSPLAG00000011140	slirp	88	57.955	Poecilia_latipinna
ENSGALG00000031238	SLIRP	85	57.955	ENSPMEG00000019535	slirp	88	57.955	Poecilia_mexicana
ENSGALG00000031238	SLIRP	86	57.303	ENSPREG00000011673	slirp	89	57.303	Poecilia_reticulata
ENSGALG00000031238	SLIRP	71	59.701	ENSPPYG00000006030	SLIRP	78	51.765	Pongo_abelii
ENSGALG00000031238	SLIRP	84	47.674	ENSPCOG00000015159	SLIRP	71	47.674	Propithecus_coquereli
ENSGALG00000031238	SLIRP	95	56.383	ENSPNAG00000008633	slirp	93	56.383	Pygocentrus_nattereri
ENSGALG00000031238	SLIRP	68	58.462	ENSRBIG00000031396	-	65	58.462	Rhinopithecus_bieti
ENSGALG00000031238	SLIRP	72	55.882	ENSRBIG00000032998	-	72	52.564	Rhinopithecus_bieti
ENSGALG00000031238	SLIRP	71	52.239	ENSRBIG00000035817	-	78	45.238	Rhinopithecus_bieti
ENSGALG00000031238	SLIRP	78	57.692	ENSRBIG00000032222	-	84	53.846	Rhinopithecus_bieti
ENSGALG00000031238	SLIRP	78	57.692	ENSRROG00000036656	-	72	58.209	Rhinopithecus_roxellana
ENSGALG00000031238	SLIRP	71	58.209	ENSRROG00000017133	-	71	57.353	Rhinopithecus_roxellana
ENSGALG00000031238	SLIRP	80	53.947	ENSRROG00000041312	-	82	51.807	Rhinopithecus_roxellana
ENSGALG00000031238	SLIRP	68	56.923	ENSRROG00000035604	-	65	56.923	Rhinopithecus_roxellana
ENSGALG00000031238	SLIRP	89	51.765	ENSSBOG00000020014	SLIRP	89	50.575	Saimiri_boliviensis_boliviensis
ENSGALG00000031238	SLIRP	87	54.217	ENSSFOG00015011165	slirp	78	57.143	Scleropages_formosus
ENSGALG00000031238	SLIRP	92	42.391	ENSSMAG00000012930	slirp	90	42.391	Scophthalmus_maximus
ENSGALG00000031238	SLIRP	87	52.326	ENSSDUG00000021883	slirp	55	52.326	Seriola_dumerili
ENSGALG00000031238	SLIRP	87	52.326	ENSSLDG00000023136	slirp	76	52.326	Seriola_lalandi_dorsalis
ENSGALG00000031238	SLIRP	95	57.895	ENSSPUG00000009346	SLIRP	97	57.895	Sphenodon_punctatus
ENSGALG00000031238	SLIRP	85	48.864	ENSSPAG00000013477	slirp	88	48.864	Stegastes_partitus
ENSGALG00000031238	SLIRP	75	51.351	ENSSSCG00000028167	SLIRP	67	51.351	Sus_scrofa
ENSGALG00000031238	SLIRP	78	89.189	ENSTGUG00000012337	SLIRP	92	77.778	Taeniopygia_guttata
ENSGALG00000031238	SLIRP	94	46.809	ENSTRUG00000020127	slirp	91	46.809	Takifugu_rubripes
ENSGALG00000031238	SLIRP	87	56.471	ENSUAMG00000022445	SLIRP	74	56.098	Ursus_americanus
ENSGALG00000031238	SLIRP	87	56.471	ENSUMAG00000007166	SLIRP	74	56.098	Ursus_maritimus
ENSGALG00000031238	SLIRP	79	47.436	ENSVPAG00000001781	SLIRP	72	47.436	Vicugna_pacos
ENSGALG00000031238	SLIRP	71	52.239	ENSVVUG00000004436	SLIRP	67	48.649	Vulpes_vulpes
ENSGALG00000031238	SLIRP	78	62.162	ENSXETG00000030343	SLIRP	84	61.333	Xenopus_tropicalis
ENSGALG00000031238	SLIRP	85	54.545	ENSXCOG00000009422	slirp	88	54.545	Xiphophorus_couchianus
ENSGALG00000031238	SLIRP	85	55.682	ENSXMAG00000015655	slirp	88	55.682	Xiphophorus_maculatus