EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000031327 (Gene tree)
Gene ID: 374195
Gene Symbol: -
Alias: -
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 77028 bases
Position: chrW:4991077-5068104
Accession: 374195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000045452	ResIII	PF04851.15	7.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000077485	-	5130	XM_015300461	ENSGALP00000050950	1709 (aa)	XP_015155947	A0A1D5PDV4
ENSGALT00000080763	-	4887	-	ENSGALP00000045452	1628 (aa)	-	A0A1D5NYJ4
ENSGALT00000060221	-	5151	XM_015300461	ENSGALP00000057923	1716 (aa)	XP_015155947	A0A1D5PY74

Gene Model

Click here to download ENSGALG00000031327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000031327's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000031327	-	96	90.121	ENSG00000153922	CHD1	91	89.994	Homo_sapiens
ENSGALG00000031327	-	70	81.889	ENSAPOG00000005764	chd1	98	81.889	Acanthochromis_polyacanthus
ENSGALG00000031327	-	92	75.752	ENSAOCG00000023105	chd1	97	74.399	Amphiprion_ocellaris
ENSGALG00000031327	-	92	76.878	ENSAPEG00000013544	chd1	97	75.490	Amphiprion_percula
ENSGALG00000031327	-	94	75.831	ENSATEG00000010676	chd1	93	75.174	Anabas_testudineus
ENSGALG00000031327	-	74	82.299	ENSAMXG00000010843	chd1	98	79.001	Astyanax_mexicanus
ENSGALG00000031327	-	96	89.802	ENSCATG00000032035	CHD1	92	89.611	Cercocebus_atys
ENSGALG00000031327	-	96	89.739	ENSCSAG00000015339	CHD1	91	89.547	Chlorocebus_sabaeus
ENSGALG00000031327	-	57	88.565	ENSCPBG00000015831	CHD1	93	87.394	Chrysemys_picta_bellii
ENSGALG00000031327	-	96	87.699	ENSCANG00000036916	CHD1	92	87.317	Colobus_angolensis_palliatus
ENSGALG00000031327	-	96	89.286	ENSCGRG00001023943	Chd1	92	89.094	Cricetulus_griseus_chok1gshd
ENSGALG00000031327	-	96	89.286	ENSCGRG00000008652	Chd1	92	89.094	Cricetulus_griseus_crigri
ENSGALG00000031327	-	91	75.465	ENSCSEG00000009553	chd1	98	73.026	Cynoglossus_semilaevis
ENSGALG00000031327	-	78	90.000	ENSEASG00005016110	CHD1	99	83.988	Equus_asinus_asinus
ENSGALG00000031327	-	93	77.369	ENSELUG00000017677	chd1	91	78.808	Esox_lucius
ENSGALG00000031327	-	75	80.000	ENSFHEG00000021164	chd1	87	81.528	Fundulus_heteroclitus
ENSGALG00000031327	-	93	81.145	ENSGMOG00000001537	chd1	92	67.966	Gadus_morhua
ENSGALG00000031327	-	80	82.407	ENSGAFG00000019880	chd1	86	82.407	Gambusia_affinis
ENSGALG00000031327	-	96	86.260	ENSGGOG00000011463	CHD1	92	86.132	Gorilla_gorilla
ENSGALG00000031327	-	92	77.623	ENSHCOG00000014222	chd1	99	72.877	Hippocampus_comes
ENSGALG00000031327	-	91	80.000	ENSIPUG00000001369	chd1	97	77.735	Ictalurus_punctatus
ENSGALG00000031327	-	57	90.548	ENSLAFG00000023183	CHD1	86	90.548	Loxodonta_africana
ENSGALG00000031327	-	96	89.739	ENSMFAG00000031226	CHD1	92	89.547	Macaca_fascicularis
ENSGALG00000031327	-	78	89.796	ENSMMUG00000014090	CHD1	89	89.717	Macaca_mulatta
ENSGALG00000031327	-	96	89.739	ENSMNEG00000045073	CHD1	92	89.547	Macaca_nemestrina
ENSGALG00000031327	-	96	85.596	ENSMLEG00000041096	CHD1	92	85.468	Mandrillus_leucophaeus
ENSGALG00000031327	-	73	81.918	ENSMZEG00005010957	chd1	95	79.150	Maylandia_zebra
ENSGALG00000031327	-	96	86.862	ENSMOCG00000019121	Chd1	91	86.671	Microtus_ochrogaster
ENSGALG00000031327	-	76	80.702	ENSMALG00000013317	chd1	89	79.670	Monopterus_albus
ENSGALG00000031327	-	96	88.337	MGP_CAROLIEiJ_G0021099	Chd1	92	88.273	Mus_caroli
ENSGALG00000031327	-	96	88.591	ENSMUSG00000023852	Chd1	92	88.464	Mus_musculus
ENSGALG00000031327	-	96	87.819	MGP_PahariEiJ_G0023414	Chd1	91	87.819	Mus_pahari
ENSGALG00000031327	-	91	76.404	ENSNBRG00000006860	chd1	97	74.183	Neolamprologus_brichardi
ENSGALG00000031327	-	96	87.460	ENSNLEG00000014493	CHD1	92	87.334	Nomascus_leucogenys
ENSGALG00000031327	-	96	90.724	ENSOANG00000004891	CHD1	100	91.667	Ornithorhynchus_anatinus
ENSGALG00000031327	-	56	79.473	ENSORLG00015016725	chd1	87	78.602	Oryzias_latipes_hsok
ENSGALG00000031327	-	96	88.325	ENSPPAG00000043367	CHD1	93	88.388	Pan_paniscus
ENSGALG00000031327	-	96	89.930	ENSPTRG00000017103	CHD1	92	89.739	Pan_troglodytes
ENSGALG00000031327	-	96	89.739	ENSPANG00000006387	CHD1	92	89.547	Papio_anubis
ENSGALG00000031327	-	93	75.526	ENSPKIG00000024719	chd1	92	77.697	Paramormyrops_kingsleyae
ENSGALG00000031327	-	76	80.482	ENSPMGG00000005785	chd1	94	79.338	Periophthalmus_magnuspinnatus
ENSGALG00000031327	-	96	89.031	ENSPEMG00000015939	Chd1	91	88.839	Peromyscus_maniculatus_bairdii
ENSGALG00000031327	-	94	75.016	ENSPREG00000004209	chd1	93	74.318	Poecilia_reticulata
ENSGALG00000031327	-	78	89.465	ENSRNOG00000014434	Chd1	89	89.308	Rattus_norvegicus
ENSGALG00000031327	-	96	88.329	ENSRBIG00000044325	CHD1	92	88.138	Rhinopithecus_bieti
ENSGALG00000031327	-	96	89.923	ENSRROG00000001726	CHD1	92	89.732	Rhinopithecus_roxellana
ENSGALG00000031327	-	75	80.769	ENSSFOG00015007161	chd1	95	78.538	Scleropages_formosus
ENSGALG00000031327	-	76	80.431	ENSSDUG00000018314	chd1	88	79.701	Seriola_dumerili
ENSGALG00000031327	-	53	83.086	ENSSLDG00000017244	chd1	84	84.752	Seriola_lalandi_dorsalis
ENSGALG00000031327	-	76	80.624	ENSSPAG00000007024	chd1	89	79.764	Stegastes_partitus
ENSGALG00000031327	-	81	91.291	ENSSSCG00000014177	CHD1	90	90.991	Sus_scrofa
ENSGALG00000031327	-	94	74.758	ENSTRUG00000010282	chd1	92	74.302	Takifugu_rubripes
ENSGALG00000031327	-	69	80.446	ENSTNIG00000007101	chd1	89	80.351	Tetraodon_nigroviridis
ENSGALG00000031327	-	95	71.474	ENSXCOG00000017184	chd1	95	71.222	Xiphophorus_couchianus
ENSGALG00000031327	-	74	79.622	ENSXMAG00000014538	chd1	91	78.732	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000775	chromosome, centromeric region	-	IEA	Component
GO:0003677	DNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component