EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000031813 (Gene tree)
Gene ID: 426135
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 9955 bases
Position: chr27:7181846-7191800
Accession: 17040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000053962	Btz	PF09405.10	2.2e-23	1	1
ENSGALP00000050232	Btz	PF09405.10	2.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000053826	CASC3-202	3065	-	ENSGALP00000050232	655 (aa)	-	A0A1D5PBV0
ENSGALT00000056951	CASC3-201	3031	-	ENSGALP00000053962	657 (aa)	-	A0A1D5PM89

Gene Model

Click here to download ENSGALG00000031813's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03013	RNA transport	KEGG
gga03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000031813's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000031813	CASC3	99	69.744	ENSG00000108349	CASC3	87	81.122	Homo_sapiens
ENSGALG00000031813	CASC3	79	52.885	ENSAPOG00000008467	casc3	69	52.479	Acanthochromis_polyacanthus
ENSGALG00000031813	CASC3	99	72.159	ENSAMEG00000007764	CASC3	90	77.516	Ailuropoda_melanoleuca
ENSGALG00000031813	CASC3	83	50.270	ENSACIG00000000720	casc3	83	48.741	Amphilophus_citrinellus
ENSGALG00000031813	CASC3	79	54.808	ENSAOCG00000016676	casc3	69	53.361	Amphiprion_ocellaris
ENSGALG00000031813	CASC3	79	54.808	ENSAPEG00000006787	casc3	69	53.419	Amphiprion_percula
ENSGALG00000031813	CASC3	86	52.282	ENSATEG00000017196	casc3	69	51.452	Anabas_testudineus
ENSGALG00000031813	CASC3	95	76.378	ENSACAG00000002674	CASC3	87	77.044	Anolis_carolinensis
ENSGALG00000031813	CASC3	62	85.437	ENSANAG00000031954	-	85	85.635	Aotus_nancymaae
ENSGALG00000031813	CASC3	97	68.289	ENSANAG00000034820	-	90	69.697	Aotus_nancymaae
ENSGALG00000031813	CASC3	82	52.997	ENSACLG00000016198	casc3	86	46.914	Astatotilapia_calliptera
ENSGALG00000031813	CASC3	95	48.824	ENSAMXG00000032452	casc3	91	47.573	Astyanax_mexicanus
ENSGALG00000031813	CASC3	99	71.449	ENSBTAG00000006250	CASC3	90	76.730	Bos_taurus
ENSGALG00000031813	CASC3	99	69.318	ENSCJAG00000016032	CASC3	90	74.371	Callithrix_jacchus
ENSGALG00000031813	CASC3	99	71.591	ENSCAFG00000016141	CASC3	90	77.044	Canis_familiaris
ENSGALG00000031813	CASC3	99	70.638	ENSCAFG00020018882	CASC3	99	70.365	Canis_lupus_dingo
ENSGALG00000031813	CASC3	99	70.170	ENSCHIG00000006338	CASC3	90	75.314	Capra_hircus
ENSGALG00000031813	CASC3	95	76.236	ENSTSYG00000002975	CASC3	89	77.033	Carlito_syrichta
ENSGALG00000031813	CASC3	93	73.744	ENSCAPG00000010514	CASC3	99	75.325	Cavia_aperea
ENSGALG00000031813	CASC3	99	69.528	ENSCPOG00000015139	CASC3	91	75.156	Cavia_porcellus
ENSGALG00000031813	CASC3	99	69.929	ENSCCAG00000033620	CASC3	90	75.039	Cebus_capucinus
ENSGALG00000031813	CASC3	99	70.170	ENSCATG00000033593	CASC3	90	76.258	Cercocebus_atys
ENSGALG00000031813	CASC3	99	68.848	ENSCLAG00000013730	CASC3	90	74.686	Chinchilla_lanigera
ENSGALG00000031813	CASC3	99	70.170	ENSCSAG00000002777	CASC3	90	76.258	Chlorocebus_sabaeus
ENSGALG00000031813	CASC3	100	77.887	ENSCPBG00000004750	CASC3	97	81.690	Chrysemys_picta_bellii
ENSGALG00000031813	CASC3	99	70.170	ENSCANG00000008814	CASC3	90	76.258	Colobus_angolensis_palliatus
ENSGALG00000031813	CASC3	99	70.270	ENSCGRG00001014706	Casc3	90	75.314	Cricetulus_griseus_chok1gshd
ENSGALG00000031813	CASC3	99	74.351	ENSCGRG00000001952	Casc3	99	74.769	Cricetulus_griseus_crigri
ENSGALG00000031813	CASC3	78	52.063	ENSCSEG00000010047	casc3	69	50.988	Cynoglossus_semilaevis
ENSGALG00000031813	CASC3	78	56.151	ENSCVAG00000014935	casc3	93	46.910	Cyprinodon_variegatus
ENSGALG00000031813	CASC3	99	71.165	ENSDNOG00000017249	CASC3	86	76.862	Dasypus_novemcinctus
ENSGALG00000031813	CASC3	99	66.952	ENSETEG00000013720	CASC3	90	72.425	Echinops_telfairi
ENSGALG00000031813	CASC3	100	36.611	ENSEBUG00000010654	casc3	100	36.352	Eptatretus_burgeri
ENSGALG00000031813	CASC3	99	70.538	ENSEASG00005002909	CASC3	90	75.705	Equus_asinus_asinus
ENSGALG00000031813	CASC3	99	71.591	ENSECAG00000019947	CASC3	79	76.887	Equus_caballus
ENSGALG00000031813	CASC3	70	64.591	ENSEEUG00000014253	CASC3	86	71.236	Erinaceus_europaeus
ENSGALG00000031813	CASC3	95	47.425	ENSELUG00000015093	casc3	92	46.248	Esox_lucius
ENSGALG00000031813	CASC3	99	71.733	ENSFCAG00000014998	CASC3	90	77.044	Felis_catus
ENSGALG00000031813	CASC3	96	86.022	ENSFALG00000000412	CASC3	100	85.868	Ficedula_albicollis
ENSGALG00000031813	CASC3	97	72.188	ENSFDAG00000020696	CASC3	96	73.217	Fukomys_damarensis
ENSGALG00000031813	CASC3	78	55.947	ENSFHEG00000015793	casc3	93	44.307	Fundulus_heteroclitus
ENSGALG00000031813	CASC3	81	50.162	ENSGAFG00000017148	casc3	65	47.405	Gambusia_affinis
ENSGALG00000031813	CASC3	95	81.587	ENSGAGG00000008432	CASC3	95	84.118	Gopherus_agassizii
ENSGALG00000031813	CASC3	99	69.886	ENSGGOG00000005067	CASC3	90	75.943	Gorilla_gorilla
ENSGALG00000031813	CASC3	82	52.997	ENSHBUG00000013155	casc3	86	46.914	Haplochromis_burtoni
ENSGALG00000031813	CASC3	99	69.405	ENSHGLG00000012117	CASC3	90	74.922	Heterocephalus_glaber_female
ENSGALG00000031813	CASC3	95	74.404	ENSHGLG00100002268	CASC3	99	75.321	Heterocephalus_glaber_male
ENSGALG00000031813	CASC3	97	47.098	ENSIPUG00000002679	casc3	91	48.179	Ictalurus_punctatus
ENSGALG00000031813	CASC3	99	71.307	ENSSTOG00000006374	CASC3	90	76.572	Ictidomys_tridecemlineatus
ENSGALG00000031813	CASC3	99	69.929	ENSJJAG00000023525	Casc3	90	75.157	Jaculus_jaculus
ENSGALG00000031813	CASC3	69	58.750	ENSKMAG00000019507	casc3	99	50.000	Kryptolebias_marmoratus
ENSGALG00000031813	CASC3	79	52.632	ENSLBEG00000005435	casc3	56	63.694	Labrus_bergylta
ENSGALG00000031813	CASC3	93	62.124	ENSLACG00000013200	CASC3	88	61.215	Latimeria_chalumnae
ENSGALG00000031813	CASC3	68	72.851	ENSLOCG00000013518	casc3	62	71.635	Lepisosteus_oculatus
ENSGALG00000031813	CASC3	99	70.170	ENSLAFG00000000606	CASC3	90	76.101	Loxodonta_africana
ENSGALG00000031813	CASC3	99	70.170	ENSMFAG00000041496	CASC3	99	70.952	Macaca_fascicularis
ENSGALG00000031813	CASC3	99	70.170	ENSMMUG00000045187	CASC3	90	76.258	Macaca_mulatta
ENSGALG00000031813	CASC3	95	75.279	ENSMLEG00000029049	CASC3	99	76.236	Mandrillus_leucophaeus
ENSGALG00000031813	CASC3	78	52.917	ENSMAMG00000005235	casc3	75	50.473	Mastacembelus_armatus
ENSGALG00000031813	CASC3	82	52.997	ENSMZEG00005003815	casc3	86	46.914	Maylandia_zebra
ENSGALG00000031813	CASC3	93	96.880	ENSMGAG00000013247	CASC3	99	97.039	Meleagris_gallopavo
ENSGALG00000031813	CASC3	76	73.054	ENSMAUG00000006023	Casc3	95	64.322	Mesocricetus_auratus
ENSGALG00000031813	CASC3	99	69.602	ENSMICG00000003321	CASC3	90	76.415	Microcebus_murinus
ENSGALG00000031813	CASC3	99	70.270	ENSMOCG00000013644	Casc3	90	74.528	Microtus_ochrogaster
ENSGALG00000031813	CASC3	99	68.534	ENSMODG00000013044	CASC3	83	73.701	Monodelphis_domestica
ENSGALG00000031813	CASC3	99	69.373	MGP_CAROLIEiJ_G0017099	Casc3	90	74.173	Mus_caroli
ENSGALG00000031813	CASC3	99	68.946	ENSMUSG00000078676	Casc3	90	73.701	Mus_musculus
ENSGALG00000031813	CASC3	99	69.385	MGP_SPRETEiJ_G0017943	Casc3	90	74.209	Mus_spretus
ENSGALG00000031813	CASC3	99	71.307	ENSMPUG00000014903	CASC3	90	76.572	Mustela_putorius_furo
ENSGALG00000031813	CASC3	99	71.348	ENSMLUG00000010520	CASC3	90	76.609	Myotis_lucifugus
ENSGALG00000031813	CASC3	99	69.373	ENSNGAG00000023121	Casc3	99	66.381	Nannospalax_galili
ENSGALG00000031813	CASC3	99	68.608	ENSNLEG00000001598	CASC3	90	75.314	Nomascus_leucogenys
ENSGALG00000031813	CASC3	70	64.258	ENSOPRG00000007240	-	65	69.731	Ochotona_princeps
ENSGALG00000031813	CASC3	99	68.175	ENSODEG00000017858	CASC3	90	74.057	Octodon_degus
ENSGALG00000031813	CASC3	80	53.469	ENSONIG00000009337	casc3	92	47.612	Oreochromis_niloticus
ENSGALG00000031813	CASC3	88	53.333	ENSOANG00000003499	-	99	53.833	Ornithorhynchus_anatinus
ENSGALG00000031813	CASC3	99	70.881	ENSOCUG00000002954	CASC3	90	75.786	Oryctolagus_cuniculus
ENSGALG00000031813	CASC3	100	69.930	ENSOGAG00000034486	CASC3	90	75.270	Otolemur_garnettii
ENSGALG00000031813	CASC3	99	71.449	ENSOARG00000013239	CASC3	90	76.730	Ovis_aries
ENSGALG00000031813	CASC3	99	69.744	ENSPPAG00000035069	CASC3	90	76.101	Pan_paniscus
ENSGALG00000031813	CASC3	99	71.591	ENSPPRG00000023670	CASC3	90	76.887	Panthera_pardus
ENSGALG00000031813	CASC3	96	76.730	ENSPTIG00000010891	CASC3	90	76.730	Panthera_tigris_altaica
ENSGALG00000031813	CASC3	99	70.312	ENSPANG00000021708	CASC3	90	76.415	Papio_anubis
ENSGALG00000031813	CASC3	95	48.974	ENSPKIG00000023186	casc3	93	48.452	Paramormyrops_kingsleyae
ENSGALG00000031813	CASC3	99	70.839	ENSPEMG00000009774	Casc3	90	75.629	Peromyscus_maniculatus_bairdii
ENSGALG00000031813	CASC3	99	70.959	ENSPCIG00000025678	CASC3	91	76.063	Phascolarctos_cinereus
ENSGALG00000031813	CASC3	97	47.504	ENSPFOG00000017632	casc3	92	49.150	Poecilia_formosa
ENSGALG00000031813	CASC3	82	53.185	ENSPLAG00000005268	casc3	93	43.658	Poecilia_latipinna
ENSGALG00000031813	CASC3	67	45.475	ENSPMEG00000010299	casc3	73	47.826	Poecilia_mexicana
ENSGALG00000031813	CASC3	67	66.667	ENSPREG00000011856	casc3	82	47.561	Poecilia_reticulata
ENSGALG00000031813	CASC3	99	69.658	ENSPPYG00000008467	CASC3	90	76.025	Pongo_abelii
ENSGALG00000031813	CASC3	99	69.602	ENSPCOG00000008183	CASC3	90	76.609	Propithecus_coquereli
ENSGALG00000031813	CASC3	99	71.023	ENSPVAG00000008556	CASC3	90	76.415	Pteropus_vampyrus
ENSGALG00000031813	CASC3	82	52.997	ENSPNYG00000011962	casc3	86	46.914	Pundamilia_nyererei
ENSGALG00000031813	CASC3	95	49.229	ENSPNAG00000015928	casc3	92	47.983	Pygocentrus_nattereri
ENSGALG00000031813	CASC3	50	74.699	ENSRNOG00000009716	Casc3	99	74.699	Rattus_norvegicus
ENSGALG00000031813	CASC3	99	70.312	ENSRBIG00000033289	CASC3	90	75.000	Rhinopithecus_bieti
ENSGALG00000031813	CASC3	99	70.312	ENSRROG00000022337	CASC3	90	76.415	Rhinopithecus_roxellana
ENSGALG00000031813	CASC3	93	73.948	ENSSBOG00000031406	CASC3	97	75.041	Saimiri_boliviensis_boliviensis
ENSGALG00000031813	CASC3	95	76.236	ENSSHAG00000013338	CASC3	99	76.849	Sarcophilus_harrisii
ENSGALG00000031813	CASC3	69	66.438	ENSSMAG00000016096	casc3	60	57.609	Scophthalmus_maximus
ENSGALG00000031813	CASC3	85	50.456	ENSSDUG00000016893	casc3	88	43.425	Seriola_dumerili
ENSGALG00000031813	CASC3	90	65.210	ENSSARG00000010378	CASC3	98	65.320	Sorex_araneus
ENSGALG00000031813	CASC3	95	76.874	ENSSSCG00000017477	CASC3	99	77.193	Sus_scrofa
ENSGALG00000031813	CASC3	79	87.931	ENSTGUG00000002300	CASC3	99	88.269	Taeniopygia_guttata
ENSGALG00000031813	CASC3	96	47.130	ENSTNIG00000003208	casc3	92	47.872	Tetraodon_nigroviridis
ENSGALG00000031813	CASC3	62	85.437	ENSTBEG00000017459	CASC3	56	83.981	Tupaia_belangeri
ENSGALG00000031813	CASC3	91	66.116	ENSTTRG00000016896	CASC3	98	66.667	Tursiops_truncatus
ENSGALG00000031813	CASC3	99	70.922	ENSUAMG00000015116	CASC3	90	76.138	Ursus_americanus
ENSGALG00000031813	CASC3	95	76.555	ENSUMAG00000017697	CASC3	99	76.555	Ursus_maritimus
ENSGALG00000031813	CASC3	64	89.381	ENSVPAG00000000799	CASC3	60	89.381	Vicugna_pacos
ENSGALG00000031813	CASC3	99	71.591	ENSVVUG00000000997	CASC3	90	77.044	Vulpes_vulpes
ENSGALG00000031813	CASC3	96	62.364	ENSXETG00000024395	casc3	92	61.994	Xenopus_tropicalis
ENSGALG00000031813	CASC3	71	63.415	ENSXMAG00000013937	casc3	69	53.138	Xiphophorus_maculatus