EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000031890 (Gene tree)
Gene ID: 396371
Gene Symbol: YBX3
Alias: CSDA
Full Name: Gallus gallus Y-box binding protein 3 (YBX3)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 24520 bases
Position: chr1:79075430-79099949
Accession: NM_205406
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000044719	CSD	PF00313.22	3.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000072603	-	1479	-	ENSGALP00000044719	291 (aa)	-	A0A1D5NWH9

Gene Model

Click here to download ENSGALG00000031890's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000031890's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000031890	YBX3	70	97.849	ENSG00000060138	YBX3	89	97.561	Homo_sapiens
ENSGALG00000031890	YBX3	93	56.980	ENSAMEG00000009393	YBX3	82	62.021	Ailuropoda_melanoleuca
ENSGALG00000031890	YBX3	74	64.437	ENSAPLG00000003147	YBX3	80	93.043	Anas_platyrhynchos
ENSGALG00000031890	YBX3	70	97.849	ENSANAG00000024492	-	91	73.818	Aotus_nancymaae
ENSGALG00000031890	YBX3	76	58.515	ENSANAG00000033366	-	76	56.621	Aotus_nancymaae
ENSGALG00000031890	YBX3	94	56.091	ENSBTAG00000009663	YBX3	83	69.369	Bos_taurus
ENSGALG00000031890	YBX3	70	97.849	ENSCJAG00000021660	-	73	83.636	Callithrix_jacchus
ENSGALG00000031890	YBX3	74	79.263	ENSCAFG00000013401	YBX3	100	83.410	Canis_familiaris
ENSGALG00000031890	YBX3	76	78.378	ENSCAFG00020006412	YBX3	100	53.476	Canis_lupus_dingo
ENSGALG00000031890	YBX3	94	57.465	ENSCHIG00000010863	YBX3	94	56.509	Capra_hircus
ENSGALG00000031890	YBX3	69	98.864	ENSTSYG00000004204	-	85	82.110	Carlito_syrichta
ENSGALG00000031890	YBX3	76	72.197	ENSTSYG00000035821	-	73	71.364	Carlito_syrichta
ENSGALG00000031890	YBX3	74	59.441	ENSCAPG00000015039	YBX3	93	59.091	Cavia_aperea
ENSGALG00000031890	YBX3	76	82.432	ENSCPOG00000011329	YBX3	81	83.105	Cavia_porcellus
ENSGALG00000031890	YBX3	70	97.849	ENSCCAG00000016469	YBX3	91	73.455	Cebus_capucinus
ENSGALG00000031890	YBX3	70	97.849	ENSCATG00000034411	YBX3	100	69.381	Cercocebus_atys
ENSGALG00000031890	YBX3	74	59.441	ENSCLAG00000016030	YBX3	94	60.140	Chinchilla_lanigera
ENSGALG00000031890	YBX3	70	97.849	ENSCSAG00000008744	YBX3	100	53.581	Chlorocebus_sabaeus
ENSGALG00000031890	YBX3	68	100.000	ENSCHOG00000011988	YBX3	53	100.000	Choloepus_hoffmanni
ENSGALG00000031890	YBX3	89	80.695	ENSCPBG00000014147	YBX3	89	81.538	Chrysemys_picta_bellii
ENSGALG00000031890	YBX3	70	97.849	ENSCANG00000036801	YBX3	89	83.182	Colobus_angolensis_palliatus
ENSGALG00000031890	YBX3	78	86.087	ENSCGRG00001016148	Ybx3	91	72.593	Cricetulus_griseus_chok1gshd
ENSGALG00000031890	YBX3	74	52.365	ENSCGRG00000004563	Ybx3	98	59.862	Cricetulus_griseus_crigri
ENSGALG00000031890	YBX3	68	100.000	ENSDORG00000009103	Ybx3	81	61.324	Dipodomys_ordii
ENSGALG00000031890	YBX3	68	100.000	ENSETEG00000002557	YBX3	90	80.000	Echinops_telfairi
ENSGALG00000031890	YBX3	76	76.018	ENSEASG00005014726	YBX3	71	73.303	Equus_asinus_asinus
ENSGALG00000031890	YBX3	76	78.378	ENSECAG00000013777	YBX3	72	79.452	Equus_caballus
ENSGALG00000031890	YBX3	73	54.035	ENSEEUG00000010415	YBX3	100	59.507	Erinaceus_europaeus
ENSGALG00000031890	YBX3	76	75.336	ENSFCAG00000027748	YBX3	100	69.608	Felis_catus
ENSGALG00000031890	YBX3	74	68.000	ENSFALG00000003661	YBX3	100	68.000	Ficedula_albicollis
ENSGALG00000031890	YBX3	68	100.000	ENSFDAG00000021192	YBX3	92	58.419	Fukomys_damarensis
ENSGALG00000031890	YBX3	89	81.081	ENSGAGG00000017780	YBX3	89	80.385	Gopherus_agassizii
ENSGALG00000031890	YBX3	70	97.849	ENSGGOG00000001352	YBX3	90	73.455	Gorilla_gorilla
ENSGALG00000031890	YBX3	78	62.191	ENSHGLG00000014798	-	85	63.736	Heterocephalus_glaber_female
ENSGALG00000031890	YBX3	69	72.549	ENSHGLG00000015495	-	86	74.894	Heterocephalus_glaber_female
ENSGALG00000031890	YBX3	74	83.105	ENSHGLG00100003589	YBX3	87	83.105	Heterocephalus_glaber_male
ENSGALG00000031890	YBX3	90	57.055	ENSSTOG00000032577	-	95	54.491	Ictidomys_tridecemlineatus
ENSGALG00000031890	YBX3	54	98.864	ENSSTOG00000002108	-	88	64.000	Ictidomys_tridecemlineatus
ENSGALG00000031890	YBX3	76	60.538	ENSJJAG00000014239	Ybx3	93	55.505	Jaculus_jaculus
ENSGALG00000031890	YBX3	70	97.849	ENSLAFG00000017247	YBX3	93	57.602	Loxodonta_africana
ENSGALG00000031890	YBX3	70	97.849	ENSMFAG00000039369	YBX3	91	72.727	Macaca_fascicularis
ENSGALG00000031890	YBX3	70	97.849	ENSMMUG00000022469	YBX3	89	59.655	Macaca_mulatta
ENSGALG00000031890	YBX3	70	97.849	ENSMNEG00000045109	YBX3	91	72.727	Macaca_nemestrina
ENSGALG00000031890	YBX3	69	98.864	ENSMLEG00000033618	YBX3	76	82.028	Mandrillus_leucophaeus
ENSGALG00000031890	YBX3	74	98.605	ENSMGAG00000014224	YBX3	100	98.605	Meleagris_gallopavo
ENSGALG00000031890	YBX3	78	86.087	ENSMAUG00000012185	Ybx3	87	83.562	Mesocricetus_auratus
ENSGALG00000031890	YBX3	70	97.849	ENSMICG00000038002	-	100	54.933	Microcebus_murinus
ENSGALG00000031890	YBX3	100	63.699	ENSMICG00000031459	-	77	74.312	Microcebus_murinus
ENSGALG00000031890	YBX3	76	88.889	ENSMOCG00000016291	Ybx3	92	83.562	Microtus_ochrogaster
ENSGALG00000031890	YBX3	74	57.746	ENSMODG00000018248	YBX3	83	79.592	Monodelphis_domestica
ENSGALG00000031890	YBX3	78	86.087	MGP_CAROLIEiJ_G0028947	Ybx3	91	71.852	Mus_caroli
ENSGALG00000031890	YBX3	78	86.087	ENSMUSG00000030189	Ybx3	91	71.481	Mus_musculus
ENSGALG00000031890	YBX3	78	86.087	MGP_PahariEiJ_G0022709	Ybx3	91	71.852	Mus_pahari
ENSGALG00000031890	YBX3	78	86.087	MGP_SPRETEiJ_G0029994	Ybx3	91	71.852	Mus_spretus
ENSGALG00000031890	YBX3	76	59.259	ENSMPUG00000011810	YBX3	100	44.764	Mustela_putorius_furo
ENSGALG00000031890	YBX3	67	55.185	ENSMLUG00000007476	YBX3	91	77.165	Myotis_lucifugus
ENSGALG00000031890	YBX3	73	78.605	ENSNGAG00000000710	Ybx3	88	78.605	Nannospalax_galili
ENSGALG00000031890	YBX3	70	86.022	ENSNLEG00000034844	YBX3	77	77.273	Nomascus_leucogenys
ENSGALG00000031890	YBX3	78	54.362	ENSODEG00000017957	YBX3	85	55.556	Octodon_degus
ENSGALG00000031890	YBX3	76	70.536	ENSOCUG00000001889	YBX3	83	56.250	Oryctolagus_cuniculus
ENSGALG00000031890	YBX3	82	88.281	ENSOGAG00000013245	YBX3	100	53.927	Otolemur_garnettii
ENSGALG00000031890	YBX3	72	93.878	ENSOARG00000020919	YBX3	97	59.582	Ovis_aries
ENSGALG00000031890	YBX3	70	97.849	ENSPPAG00000039068	YBX3	76	82.727	Pan_paniscus
ENSGALG00000031890	YBX3	76	75.336	ENSPPRG00000005859	YBX3	100	69.608	Panthera_pardus
ENSGALG00000031890	YBX3	74	59.011	ENSPTIG00000005322	YBX3	81	61.754	Panthera_tigris_altaica
ENSGALG00000031890	YBX3	70	97.849	ENSPTRG00000004681	YBX3	100	68.404	Pan_troglodytes
ENSGALG00000031890	YBX3	70	97.849	ENSPANG00000010280	YBX3	91	72.727	Papio_anubis
ENSGALG00000031890	YBX3	74	88.785	ENSPSIG00000009247	YBX3	100	88.785	Pelodiscus_sinensis
ENSGALG00000031890	YBX3	87	76.378	ENSPEMG00000010391	-	95	74.803	Peromyscus_maniculatus_bairdii
ENSGALG00000031890	YBX3	79	84.746	ENSPEMG00000012132	-	88	83.105	Peromyscus_maniculatus_bairdii
ENSGALG00000031890	YBX3	65	54.724	ENSPCIG00000029949	YBX3	100	54.086	Phascolarctos_cinereus
ENSGALG00000031890	YBX3	70	97.849	ENSPPYG00000004279	YBX3	93	56.522	Pongo_abelii
ENSGALG00000031890	YBX3	78	86.087	ENSRNOG00000005480	Ybx3	75	83.105	Rattus_norvegicus
ENSGALG00000031890	YBX3	70	97.849	ENSRBIG00000039208	YBX3	100	69.055	Rhinopithecus_bieti
ENSGALG00000031890	YBX3	70	97.849	ENSRROG00000029638	YBX3	100	69.055	Rhinopithecus_roxellana
ENSGALG00000031890	YBX3	69	98.864	ENSSBOG00000030573	YBX3	73	82.192	Saimiri_boliviensis_boliviensis
ENSGALG00000031890	YBX3	66	98.837	ENSSHAG00000003262	YBX3	71	98.077	Sarcophilus_harrisii
ENSGALG00000031890	YBX3	75	76.471	ENSSSCG00000000633	YBX3	100	70.192	Sus_scrofa
ENSGALG00000031890	YBX3	74	100.000	ENSTGUG00000012047	YBX3	75	100.000	Taeniopygia_guttata
ENSGALG00000031890	YBX3	76	85.321	ENSTBEG00000012570	YBX3	72	79.333	Tupaia_belangeri
ENSGALG00000031890	YBX3	66	66.429	ENSTTRG00000008045	YBX3	92	72.727	Tursiops_truncatus
ENSGALG00000031890	YBX3	71	55.036	ENSUAMG00000016662	YBX3	100	57.246	Ursus_americanus
ENSGALG00000031890	YBX3	74	59.298	ENSUMAG00000016118	YBX3	94	61.404	Ursus_maritimus
ENSGALG00000031890	YBX3	60	100.000	ENSVPAG00000000876	YBX3	62	100.000	Vicugna_pacos
ENSGALG00000031890	YBX3	71	54.317	ENSVVUG00000004956	YBX3	100	57.246	Vulpes_vulpes
ENSGALG00000031890	YBX3	75	75.909	ENSXETG00000016239	ybx3	88	72.273	Xenopus_tropicalis