EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000031922 (Gene tree)
Gene ID: 425909
Gene Symbol: TRMU
Alias: -
Full Name: Gallus gallus tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase (TRMU)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 11625 bases
Position: chr1:15848575-15860199
Accession: NM_001031351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000053750	tRNA_Me_trans	PF03054.16	2e-136	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000053602	-	2884	-	ENSGALP00000053750	424 (aa)	-	Q5ZKW0

Gene Model

Click here to download ENSGALG00000031922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000031922's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000031922	TRMU	96	78.870	ENSG00000100416	TRMU	100	86.667	Homo_sapiens
ENSGALG00000031922	TRMU	95	72.953	ENSAPOG00000014458	trmu	95	72.953	Acanthochromis_polyacanthus
ENSGALG00000031922	TRMU	99	76.905	ENSAMEG00000003319	TRMU	99	76.905	Ailuropoda_melanoleuca
ENSGALG00000031922	TRMU	95	71.712	ENSACIG00000002101	trmu	95	71.712	Amphilophus_citrinellus
ENSGALG00000031922	TRMU	95	73.201	ENSAOCG00000013155	trmu	95	73.201	Amphiprion_ocellaris
ENSGALG00000031922	TRMU	95	72.953	ENSAPEG00000013350	trmu	95	72.953	Amphiprion_percula
ENSGALG00000031922	TRMU	95	73.201	ENSATEG00000007814	trmu	96	73.201	Anabas_testudineus
ENSGALG00000031922	TRMU	93	91.162	ENSAPLG00000016380	TRMU	99	91.162	Anas_platyrhynchos
ENSGALG00000031922	TRMU	100	78.638	ENSACAG00000007720	TRMU	100	78.638	Anolis_carolinensis
ENSGALG00000031922	TRMU	96	77.887	ENSANAG00000038053	TRMU	95	77.887	Aotus_nancymaae
ENSGALG00000031922	TRMU	96	72.727	ENSACLG00000005395	trmu	98	72.149	Astatotilapia_calliptera
ENSGALG00000031922	TRMU	98	70.120	ENSAMXG00000005282	trmu	98	70.120	Astyanax_mexicanus
ENSGALG00000031922	TRMU	98	77.295	ENSBTAG00000005595	TRMU	97	77.295	Bos_taurus
ENSGALG00000031922	TRMU	92	39.798	WBGene00007114	mttu-1	98	39.798	Caenorhabditis_elegans
ENSGALG00000031922	TRMU	98	75.604	ENSCJAG00000000198	TRMU	96	75.604	Callithrix_jacchus
ENSGALG00000031922	TRMU	96	78.186	ENSCAFG00000000779	TRMU	94	78.186	Canis_familiaris
ENSGALG00000031922	TRMU	96	78.186	ENSCAFG00020009184	TRMU	94	78.186	Canis_lupus_dingo
ENSGALG00000031922	TRMU	96	78.519	ENSCHIG00000017074	TRMU	95	78.519	Capra_hircus
ENSGALG00000031922	TRMU	97	77.670	ENSTSYG00000003853	TRMU	96	77.670	Carlito_syrichta
ENSGALG00000031922	TRMU	95	72.922	ENSCAPG00000013034	TRMU	97	72.922	Cavia_aperea
ENSGALG00000031922	TRMU	99	77.033	ENSCPOG00000020780	TRMU	97	77.033	Cavia_porcellus
ENSGALG00000031922	TRMU	99	75.714	ENSCCAG00000021641	TRMU	98	75.714	Cebus_capucinus
ENSGALG00000031922	TRMU	96	78.133	ENSCATG00000032800	TRMU	95	78.133	Cercocebus_atys
ENSGALG00000031922	TRMU	98	77.938	ENSCLAG00000017269	TRMU	97	77.938	Chinchilla_lanigera
ENSGALG00000031922	TRMU	96	78.378	ENSCSAG00000005279	TRMU	95	78.378	Chlorocebus_sabaeus
ENSGALG00000031922	TRMU	93	80.702	ENSCPBG00000011621	TRMU	98	80.702	Chrysemys_picta_bellii
ENSGALG00000031922	TRMU	94	45.658	ENSCING00000019371	-	97	45.658	Ciona_intestinalis
ENSGALG00000031922	TRMU	96	77.887	ENSCANG00000041645	TRMU	95	77.887	Colobus_angolensis_palliatus
ENSGALG00000031922	TRMU	96	77.887	ENSCGRG00001001739	Trmu	95	77.887	Cricetulus_griseus_chok1gshd
ENSGALG00000031922	TRMU	96	72.973	ENSCGRG00000002781	Trmu	95	72.973	Cricetulus_griseus_crigri
ENSGALG00000031922	TRMU	98	69.157	ENSCSEG00000012382	trmu	98	69.157	Cynoglossus_semilaevis
ENSGALG00000031922	TRMU	99	70.952	ENSCVAG00000001366	trmu	99	70.952	Cyprinodon_variegatus
ENSGALG00000031922	TRMU	97	69.024	ENSDARG00000043734	trmu	97	69.024	Danio_rerio
ENSGALG00000031922	TRMU	55	70.386	ENSDNOG00000047245	-	89	64.528	Dasypus_novemcinctus
ENSGALG00000031922	TRMU	96	78.624	ENSDORG00000007455	Trmu	97	78.624	Dipodomys_ordii
ENSGALG00000031922	TRMU	90	43.045	FBgn0040337	CG3021	95	43.622	Drosophila_melanogaster
ENSGALG00000031922	TRMU	96	54.390	ENSEBUG00000007454	trmu	99	54.390	Eptatretus_burgeri
ENSGALG00000031922	TRMU	98	76.978	ENSEASG00005021725	TRMU	97	76.978	Equus_asinus_asinus
ENSGALG00000031922	TRMU	98	76.978	ENSECAG00000000467	TRMU	97	76.978	Equus_caballus
ENSGALG00000031922	TRMU	55	87.500	ENSEEUG00000000074	-	55	87.500	Erinaceus_europaeus
ENSGALG00000031922	TRMU	99	68.571	ENSELUG00000009464	trmu	99	69.681	Esox_lucius
ENSGALG00000031922	TRMU	96	78.133	ENSFCAG00000006533	TRMU	95	78.133	Felis_catus
ENSGALG00000031922	TRMU	93	92.677	ENSFALG00000010035	TRMU	100	92.677	Ficedula_albicollis
ENSGALG00000031922	TRMU	92	76.350	ENSFDAG00000017472	TRMU	97	76.350	Fukomys_damarensis
ENSGALG00000031922	TRMU	99	72.619	ENSFHEG00000003162	trmu	97	74.933	Fundulus_heteroclitus
ENSGALG00000031922	TRMU	95	63.391	ENSGMOG00000001323	trmu	98	63.391	Gadus_morhua
ENSGALG00000031922	TRMU	95	75.434	ENSGAFG00000013331	trmu	95	75.434	Gambusia_affinis
ENSGALG00000031922	TRMU	99	68.150	ENSGACG00000019024	trmu	99	68.150	Gasterosteus_aculeatus
ENSGALG00000031922	TRMU	96	78.624	ENSGGOG00000000203	TRMU	95	78.624	Gorilla_gorilla
ENSGALG00000031922	TRMU	96	72.236	ENSHBUG00000023421	trmu	98	71.618	Haplochromis_burtoni
ENSGALG00000031922	TRMU	98	75.779	ENSHGLG00000009278	TRMU	97	75.779	Heterocephalus_glaber_female
ENSGALG00000031922	TRMU	98	75.779	ENSHGLG00100018863	TRMU	97	75.779	Heterocephalus_glaber_male
ENSGALG00000031922	TRMU	99	71.770	ENSHCOG00000013459	trmu	99	71.770	Hippocampus_comes
ENSGALG00000031922	TRMU	95	70.297	ENSIPUG00000009785	trmu	98	70.297	Ictalurus_punctatus
ENSGALG00000031922	TRMU	96	79.412	ENSSTOG00000010993	TRMU	95	79.412	Ictidomys_tridecemlineatus
ENSGALG00000031922	TRMU	98	76.499	ENSJJAG00000000667	Trmu	98	76.499	Jaculus_jaculus
ENSGALG00000031922	TRMU	99	69.762	ENSKMAG00000008516	trmu	99	69.762	Kryptolebias_marmoratus
ENSGALG00000031922	TRMU	99	69.048	ENSLBEG00000018831	trmu	99	69.048	Labrus_bergylta
ENSGALG00000031922	TRMU	99	74.408	ENSLACG00000013713	TRMU	99	74.408	Latimeria_chalumnae
ENSGALG00000031922	TRMU	97	74.576	ENSLOCG00000016066	trmu	97	74.576	Lepisosteus_oculatus
ENSGALG00000031922	TRMU	96	69.268	ENSLAFG00000005129	TRMU	96	69.268	Loxodonta_africana
ENSGALG00000031922	TRMU	96	78.378	ENSMFAG00000039767	TRMU	95	78.378	Macaca_fascicularis
ENSGALG00000031922	TRMU	96	78.378	ENSMMUG00000000807	TRMU	95	78.378	Macaca_mulatta
ENSGALG00000031922	TRMU	96	78.378	ENSMNEG00000028164	TRMU	95	78.378	Macaca_nemestrina
ENSGALG00000031922	TRMU	96	78.133	ENSMLEG00000033884	TRMU	95	78.133	Mandrillus_leucophaeus
ENSGALG00000031922	TRMU	96	73.956	ENSMAMG00000004717	trmu	95	73.956	Mastacembelus_armatus
ENSGALG00000031922	TRMU	96	72.727	ENSMZEG00005015797	trmu	96	72.727	Maylandia_zebra
ENSGALG00000031922	TRMU	81	97.661	ENSMGAG00000007550	TRMU	100	97.661	Meleagris_gallopavo
ENSGALG00000031922	TRMU	98	76.259	ENSMAUG00000022282	Trmu	98	76.259	Mesocricetus_auratus
ENSGALG00000031922	TRMU	96	78.676	ENSMICG00000029046	TRMU	97	78.676	Microcebus_murinus
ENSGALG00000031922	TRMU	96	77.262	ENSMOCG00000014641	Trmu	96	77.262	Microtus_ochrogaster
ENSGALG00000031922	TRMU	95	72.208	ENSMMOG00000007229	trmu	95	72.208	Mola_mola
ENSGALG00000031922	TRMU	95	75.556	ENSMODG00000007433	TRMU	93	75.556	Monodelphis_domestica
ENSGALG00000031922	TRMU	99	69.286	ENSMALG00000007721	trmu	99	69.286	Monopterus_albus
ENSGALG00000031922	TRMU	96	77.641	MGP_CAROLIEiJ_G0020134	Trmu	88	86.000	Mus_caroli
ENSGALG00000031922	TRMU	96	77.887	ENSMUSG00000022386	Trmu	96	77.887	Mus_musculus
ENSGALG00000031922	TRMU	96	77.641	MGP_PahariEiJ_G0020139	Trmu	88	86.000	Mus_pahari
ENSGALG00000031922	TRMU	96	77.887	MGP_SPRETEiJ_G0021031	Trmu	88	86.000	Mus_spretus
ENSGALG00000031922	TRMU	96	77.696	ENSMPUG00000002523	TRMU	95	77.696	Mustela_putorius_furo
ENSGALG00000031922	TRMU	99	75.059	ENSNGAG00000005132	Trmu	99	75.059	Nannospalax_galili
ENSGALG00000031922	TRMU	96	72.727	ENSNBRG00000022690	trmu	98	72.660	Neolamprologus_brichardi
ENSGALG00000031922	TRMU	96	78.378	ENSNLEG00000015773	TRMU	95	78.378	Nomascus_leucogenys
ENSGALG00000031922	TRMU	79	65.179	ENSMEUG00000000216	TRMU	99	65.179	Notamacropus_eugenii
ENSGALG00000031922	TRMU	99	76.359	ENSODEG00000014745	TRMU	99	76.359	Octodon_degus
ENSGALG00000031922	TRMU	96	72.973	ENSONIG00000009821	trmu	96	72.973	Oreochromis_niloticus
ENSGALG00000031922	TRMU	92	73.077	ENSOANG00000001891	TRMU	97	73.077	Ornithorhynchus_anatinus
ENSGALG00000031922	TRMU	90	79.211	ENSOCUG00000003664	TRMU	93	78.141	Oryctolagus_cuniculus
ENSGALG00000031922	TRMU	97	70.000	ENSORLG00000019015	trmu	97	70.000	Oryzias_latipes
ENSGALG00000031922	TRMU	97	69.756	ENSORLG00020006830	trmu	97	69.756	Oryzias_latipes_hni
ENSGALG00000031922	TRMU	97	69.756	ENSORLG00015003907	trmu	97	69.756	Oryzias_latipes_hsok
ENSGALG00000031922	TRMU	55	70.940	ENSOMEG00000015541	trmu	82	70.940	Oryzias_melastigma
ENSGALG00000031922	TRMU	96	77.206	ENSOGAG00000008096	TRMU	96	77.206	Otolemur_garnettii
ENSGALG00000031922	TRMU	92	74.227	ENSOARG00000019475	TRMU	93	74.227	Ovis_aries
ENSGALG00000031922	TRMU	96	78.624	ENSPPAG00000033944	TRMU	95	78.624	Pan_paniscus
ENSGALG00000031922	TRMU	96	78.186	ENSPPRG00000004197	TRMU	95	78.186	Panthera_pardus
ENSGALG00000031922	TRMU	65	75.812	ENSPTIG00000014122	TRMU	97	76.103	Panthera_tigris_altaica
ENSGALG00000031922	TRMU	96	78.624	ENSPTRG00000014510	TRMU	95	78.624	Pan_troglodytes
ENSGALG00000031922	TRMU	95	78.412	ENSPANG00000023074	TRMU	91	78.412	Papio_anubis
ENSGALG00000031922	TRMU	99	70.644	ENSPKIG00000002849	trmu	99	70.644	Paramormyrops_kingsleyae
ENSGALG00000031922	TRMU	92	80.563	ENSPSIG00000013020	TRMU	100	80.563	Pelodiscus_sinensis
ENSGALG00000031922	TRMU	95	72.953	ENSPMGG00000004083	trmu	95	72.953	Periophthalmus_magnuspinnatus
ENSGALG00000031922	TRMU	98	76.739	ENSPEMG00000014007	Trmu	98	76.739	Peromyscus_maniculatus_bairdii
ENSGALG00000031922	TRMU	95	72.705	ENSPCIG00000009923	TRMU	97	71.259	Phascolarctos_cinereus
ENSGALG00000031922	TRMU	95	70.690	ENSPFOG00000008197	trmu	89	70.690	Poecilia_formosa
ENSGALG00000031922	TRMU	98	72.530	ENSPLAG00000008414	trmu	98	72.530	Poecilia_latipinna
ENSGALG00000031922	TRMU	98	72.771	ENSPMEG00000004326	trmu	98	72.771	Poecilia_mexicana
ENSGALG00000031922	TRMU	99	72.315	ENSPREG00000007980	trmu	99	72.315	Poecilia_reticulata
ENSGALG00000031922	TRMU	99	77.143	ENSPPYG00000011949	TRMU	98	77.143	Pongo_abelii
ENSGALG00000031922	TRMU	93	70.051	ENSPCAG00000013462	TRMU	99	70.051	Procavia_capensis
ENSGALG00000031922	TRMU	96	78.186	ENSPCOG00000016539	TRMU	96	78.186	Propithecus_coquereli
ENSGALG00000031922	TRMU	96	72.304	ENSPVAG00000013202	TRMU	96	72.127	Pteropus_vampyrus
ENSGALG00000031922	TRMU	96	72.236	ENSPNYG00000005629	trmu	96	72.236	Pundamilia_nyererei
ENSGALG00000031922	TRMU	95	71.712	ENSPNAG00000006339	trmu	93	71.712	Pygocentrus_nattereri
ENSGALG00000031922	TRMU	96	78.133	ENSRNOG00000016465	Trmu	96	78.133	Rattus_norvegicus
ENSGALG00000031922	TRMU	96	77.150	ENSRBIG00000038973	TRMU	95	77.150	Rhinopithecus_bieti
ENSGALG00000031922	TRMU	96	77.396	ENSRROG00000004267	TRMU	95	77.396	Rhinopithecus_roxellana
ENSGALG00000031922	TRMU	91	32.029	YDL033C	SLM3	91	32.029	Saccharomyces_cerevisiae
ENSGALG00000031922	TRMU	96	77.396	ENSSBOG00000030184	TRMU	95	77.396	Saimiri_boliviensis_boliviensis
ENSGALG00000031922	TRMU	91	70.052	ENSSFOG00015020664	trmu	99	70.052	Scleropages_formosus
ENSGALG00000031922	TRMU	96	71.007	ENSSMAG00000019450	trmu	96	71.007	Scophthalmus_maximus
ENSGALG00000031922	TRMU	95	72.953	ENSSDUG00000011913	trmu	95	72.953	Seriola_dumerili
ENSGALG00000031922	TRMU	95	73.201	ENSSLDG00000011684	trmu	95	73.201	Seriola_lalandi_dorsalis
ENSGALG00000031922	TRMU	100	69.626	ENSSPUG00000017123	TRMU	100	69.626	Sphenodon_punctatus
ENSGALG00000031922	TRMU	95	70.471	ENSSPAG00000021875	trmu	95	70.471	Stegastes_partitus
ENSGALG00000031922	TRMU	97	74.939	ENSSSCG00000000007	TRMU	96	74.939	Sus_scrofa
ENSGALG00000031922	TRMU	90	90.526	ENSTGUG00000003663	-	100	90.526	Taeniopygia_guttata
ENSGALG00000031922	TRMU	95	71.216	ENSTRUG00000001231	trmu	96	71.216	Takifugu_rubripes
ENSGALG00000031922	TRMU	95	71.852	ENSTNIG00000010484	trmu	94	71.852	Tetraodon_nigroviridis
ENSGALG00000031922	TRMU	71	66.298	ENSTBEG00000011276	-	77	66.298	Tupaia_belangeri
ENSGALG00000031922	TRMU	97	77.129	ENSTTRG00000004160	TRMU	96	77.129	Tursiops_truncatus
ENSGALG00000031922	TRMU	71	74.587	ENSUAMG00000024825	TRMU	98	74.587	Ursus_americanus
ENSGALG00000031922	TRMU	98	63.527	ENSUMAG00000019079	TRMU	97	74.717	Ursus_maritimus
ENSGALG00000031922	TRMU	54	63.877	ENSVPAG00000000685	-	100	63.877	Vicugna_pacos
ENSGALG00000031922	TRMU	96	77.451	ENSVVUG00000024963	TRMU	95	77.451	Vulpes_vulpes
ENSGALG00000031922	TRMU	99	75.656	ENSXETG00000023304	trmu	96	75.656	Xenopus_tropicalis
ENSGALG00000031922	TRMU	99	70.755	ENSXCOG00000015105	trmu	99	70.755	Xiphophorus_couchianus
ENSGALG00000031922	TRMU	99	72.792	ENSXMAG00000006697	trmu	99	72.792	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0002143	tRNA wobble position uridine thiolation	21873635.	IBA	Process
GO:0005524	ATP binding	-	IEA	Function
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0016783	sulfurtransferase activity	-	IEA	Function