EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000032930 (Gene tree)
Gene ID: 396201
Gene Symbol: NCL
Alias: -
Full Name: Gallus gallus nucleolin (NCL)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 7435 bases
Position: chr9:15430541-15437975
Accession: NM_205265
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000045642	RRM_1	PF00076.22	1.2e-68	1	4
ENSGALP00000045642	RRM_1	PF00076.22	1.2e-68	2	4
ENSGALP00000045642	RRM_1	PF00076.22	1.2e-68	3	4
ENSGALP00000045642	RRM_1	PF00076.22	1.2e-68	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000058391	-	2567	-	ENSGALP00000045642	691 (aa)	-	A0A1D5NZ30

Gene Model

Click here to download ENSGALG00000032930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000032930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000032930	NCL	59	39.243	ENSAPOG00000014534	-	67	39.186	Acanthochromis_polyacanthus
ENSGALG00000032930	NCL	55	59.259	ENSAPOG00000023888	ncl	56	59.580	Acanthochromis_polyacanthus
ENSGALG00000032930	NCL	55	57.784	ENSACIG00000013234	ncl	62	57.784	Amphilophus_citrinellus
ENSGALG00000032930	NCL	59	38.263	ENSAOCG00000014792	-	61	39.241	Amphiprion_ocellaris
ENSGALG00000032930	NCL	55	60.053	ENSAOCG00000003133	ncl	52	60.053	Amphiprion_ocellaris
ENSGALG00000032930	NCL	55	60.053	ENSAPEG00000002769	ncl	52	60.053	Amphiprion_percula
ENSGALG00000032930	NCL	59	38.263	ENSAPEG00000013612	-	61	39.241	Amphiprion_percula
ENSGALG00000032930	NCL	66	39.715	ENSATEG00000019862	-	80	41.814	Anabas_testudineus
ENSGALG00000032930	NCL	65	85.714	ENSAPLG00000012897	-	64	94.805	Anas_platyrhynchos
ENSGALG00000032930	NCL	85	63.651	ENSACAG00000001006	-	53	70.588	Anolis_carolinensis
ENSGALG00000032930	NCL	51	61.093	ENSACLG00000026031	ncl	85	61.093	Astatotilapia_calliptera
ENSGALG00000032930	NCL	55	58.575	ENSAMXG00000001647	ncl	81	60.784	Astyanax_mexicanus
ENSGALG00000032930	NCL	55	48.312	ENSCHIG00000012665	-	54	48.843	Capra_hircus
ENSGALG00000032930	NCL	92	69.134	ENSCPBG00000016444	-	57	79.221	Chrysemys_picta_bellii
ENSGALG00000032930	NCL	55	58.901	ENSCSEG00000015089	ncl	57	58.901	Cynoglossus_semilaevis
ENSGALG00000032930	NCL	55	59.211	ENSCVAG00000012600	ncl	54	59.530	Cyprinodon_variegatus
ENSGALG00000032930	NCL	64	50.679	ENSDNOG00000040257	-	61	52.291	Dasypus_novemcinctus
ENSGALG00000032930	NCL	50	33.206	ENSELUG00000006033	ncl	50	33.206	Esox_lucius
ENSGALG00000032930	NCL	62	46.083	ENSELUG00000022826	-	86	47.932	Esox_lucius
ENSGALG00000032930	NCL	91	75.671	ENSFALG00000007592	-	55	83.204	Ficedula_albicollis
ENSGALG00000032930	NCL	55	58.486	ENSFHEG00000018000	ncl	60	58.974	Fundulus_heteroclitus
ENSGALG00000032930	NCL	56	55.385	ENSGMOG00000001341	ncl	59	55.526	Gadus_morhua
ENSGALG00000032930	NCL	55	60.582	ENSGAFG00000015375	ncl	50	60.582	Gambusia_affinis
ENSGALG00000032930	NCL	55	56.589	ENSGACG00000008970	ncl	60	57.407	Gasterosteus_aculeatus
ENSGALG00000032930	NCL	92	68.711	ENSGAGG00000013330	-	57	78.442	Gopherus_agassizii
ENSGALG00000032930	NCL	55	59.424	ENSHBUG00000006869	ncl	72	59.947	Haplochromis_burtoni
ENSGALG00000032930	NCL	58	57.606	ENSHCOG00000010234	ncl	52	59.524	Hippocampus_comes
ENSGALG00000032930	NCL	56	39.604	ENSLBEG00000007915	-	65	39.898	Labrus_bergylta
ENSGALG00000032930	NCL	54	39.589	ENSLBEG00000014278	-	81	40.274	Labrus_bergylta
ENSGALG00000032930	NCL	54	59.574	ENSLBEG00000019073	ncl	55	59.574	Labrus_bergylta
ENSGALG00000032930	NCL	57	51.515	ENSLACG00000022167	-	80	52.368	Latimeria_chalumnae
ENSGALG00000032930	NCL	56	64.359	ENSLACG00000009328	ncl	57	64.267	Latimeria_chalumnae
ENSGALG00000032930	NCL	53	57.838	ENSLOCG00000004828	ncl	51	57.772	Lepisosteus_oculatus
ENSGALG00000032930	NCL	55	39.547	ENSMAMG00000003479	-	69	38.131	Mastacembelus_armatus
ENSGALG00000032930	NCL	55	59.162	ENSMZEG00005017438	ncl	53	59.682	Maylandia_zebra
ENSGALG00000032930	NCL	59	96.181	ENSMGAG00000008147	-	100	96.181	Meleagris_gallopavo
ENSGALG00000032930	NCL	55	66.071	ENSMODG00000002470	-	54	65.990	Monodelphis_domestica
ENSGALG00000032930	NCL	58	59.605	ENSMALG00000014827	ncl	51	59.605	Monopterus_albus
ENSGALG00000032930	NCL	56	47.950	ENSMPUG00000001663	-	58	48.265	Mustela_putorius_furo
ENSGALG00000032930	NCL	55	59.424	ENSONIG00000012508	ncl	52	59.947	Oreochromis_niloticus
ENSGALG00000032930	NCL	55	35.789	ENSONIG00000010631	-	96	35.904	Oreochromis_niloticus
ENSGALG00000032930	NCL	55	68.542	ENSOANG00000008732	-	62	68.367	Ornithorhynchus_anatinus
ENSGALG00000032930	NCL	58	32.524	ENSORLG00000004645	-	85	33.753	Oryzias_latipes
ENSGALG00000032930	NCL	52	57.500	ENSORLG00000007055	ncl	51	56.579	Oryzias_latipes
ENSGALG00000032930	NCL	63	32.671	ENSORLG00020003497	-	76	34.091	Oryzias_latipes_hni
ENSGALG00000032930	NCL	55	55.937	ENSORLG00020017943	ncl	58	52.336	Oryzias_latipes_hni
ENSGALG00000032930	NCL	51	61.290	ENSORLG00015013815	ncl	87	61.935	Oryzias_latipes_hsok
ENSGALG00000032930	NCL	59	33.647	ENSORLG00015006613	-	79	34.509	Oryzias_latipes_hsok
ENSGALG00000032930	NCL	58	33.816	ENSOMEG00000015864	-	83	34.430	Oryzias_melastigma
ENSGALG00000032930	NCL	55	60.789	ENSPKIG00000002604	ncl	53	60.367	Paramormyrops_kingsleyae
ENSGALG00000032930	NCL	91	65.913	ENSPSIG00000002361	-	54	75.696	Pelodiscus_sinensis
ENSGALG00000032930	NCL	51	62.500	ENSPMGG00000004709	ncl	82	62.500	Periophthalmus_magnuspinnatus
ENSGALG00000032930	NCL	55	66.837	ENSPCIG00000003293	-	54	66.921	Phascolarctos_cinereus
ENSGALG00000032930	NCL	55	59.269	ENSPLAG00000024026	ncl	51	59.791	Poecilia_latipinna
ENSGALG00000032930	NCL	55	59.162	ENSPNYG00000020494	ncl	53	59.682	Pundamilia_nyererei
ENSGALG00000032930	NCL	55	58.793	ENSPNAG00000006192	ncl	51	60.105	Pygocentrus_nattereri
ENSGALG00000032930	NCL	58	61.364	ENSSHAG00000007489	-	50	61.364	Sarcophilus_harrisii
ENSGALG00000032930	NCL	55	61.399	ENSSHAG00000002702	-	59	61.340	Sarcophilus_harrisii
ENSGALG00000032930	NCL	56	63.542	ENSSFOG00015008583	ncl	59	63.281	Scleropages_formosus
ENSGALG00000032930	NCL	55	58.793	ENSSMAG00000021241	ncl	53	59.055	Scophthalmus_maximus
ENSGALG00000032930	NCL	74	36.723	ENSSMAG00000007582	-	63	40.452	Scophthalmus_maximus
ENSGALG00000032930	NCL	71	37.378	ENSSDUG00000010922	-	70	41.624	Seriola_dumerili
ENSGALG00000032930	NCL	56	60.519	ENSSDUG00000006128	ncl	85	60.847	Seriola_dumerili
ENSGALG00000032930	NCL	55	60.847	ENSSLDG00000002012	ncl	53	60.847	Seriola_lalandi_dorsalis
ENSGALG00000032930	NCL	59	40.235	ENSSLDG00000015784	-	65	41.371	Seriola_lalandi_dorsalis
ENSGALG00000032930	NCL	59	41.388	ENSSPAG00000001859	-	61	40.933	Stegastes_partitus
ENSGALG00000032930	NCL	64	76.615	ENSTGUG00000009782	-	87	70.383	Taeniopygia_guttata
ENSGALG00000032930	NCL	63	55.936	ENSTRUG00000008185	ncl	55	56.614	Takifugu_rubripes
ENSGALG00000032930	NCL	52	58.038	ENSTNIG00000012186	ncl	62	58.225	Tetraodon_nigroviridis
ENSGALG00000032930	NCL	55	62.402	ENSXETG00000009517	ncl	54	63.185	Xenopus_tropicalis
ENSGALG00000032930	NCL	60	42.901	ENSXCOG00000003524	ncl	86	50.804	Xiphophorus_couchianus
ENSGALG00000032930	NCL	54	36.269	ENSXCOG00000007369	-	89	36.528	Xiphophorus_couchianus
ENSGALG00000032930	NCL	55	61.097	ENSXMAG00000005914	ncl	51	61.097	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component