EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000033064 (Gene tree)
Gene ID: 419783
Gene Symbol: DDX6
Alias: RCK
Full Name: Gallus gallus DEAD-box helicase 6 (DDX6)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 13934 bases
Position: chr24:5580358-5594291
Accession: NM_001282047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000046305	DEAD	PF00270.29	2.3e-42	1	1
ENSGALP00000065105	DEAD	PF00270.29	2.3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000058124	-	3435	-	ENSGALP00000046305	483 (aa)	XP_015153490	Q5ZKB9
ENSGALT00000107898	-	2840	-	ENSGALP00000065105	483 (aa)	XP_015153490	UPI0000443689

Gene Model

Click here to download ENSGALG00000033064's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000033064's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000033064	DDX6	99	99.378	ENSG00000110367	DDX6	99	99.378	Homo_sapiens
ENSGALG00000033064	DDX6	99	89.441	ENSAPOG00000007695	ddx6	99	89.441	Acanthochromis_polyacanthus
ENSGALG00000033064	DDX6	99	99.585	ENSAMEG00000006073	DDX6	99	99.585	Ailuropoda_melanoleuca
ENSGALG00000033064	DDX6	99	75.776	ENSACIG00000023989	ddx6	99	75.362	Amphilophus_citrinellus
ENSGALG00000033064	DDX6	99	89.441	ENSAOCG00000022849	ddx6	99	89.441	Amphiprion_ocellaris
ENSGALG00000033064	DDX6	99	89.441	ENSAPEG00000013047	ddx6	99	89.441	Amphiprion_percula
ENSGALG00000033064	DDX6	99	89.834	ENSATEG00000009693	ddx6	99	89.834	Anabas_testudineus
ENSGALG00000033064	DDX6	100	100.000	ENSAPLG00000007274	DDX6	100	100.000	Anas_platyrhynchos
ENSGALG00000033064	DDX6	99	96.687	ENSACAG00000017134	DDX6	99	96.687	Anolis_carolinensis
ENSGALG00000033064	DDX6	99	70.124	ENSANAG00000032103	-	90	87.368	Aotus_nancymaae
ENSGALG00000033064	DDX6	99	94.227	ENSANAG00000038280	-	99	94.227	Aotus_nancymaae
ENSGALG00000033064	DDX6	99	89.834	ENSACLG00000022164	ddx6	99	89.834	Astatotilapia_calliptera
ENSGALG00000033064	DDX6	99	89.234	ENSAMXG00000019553	ddx6	99	89.441	Astyanax_mexicanus
ENSGALG00000033064	DDX6	99	99.585	ENSBTAG00000009067	DDX6	99	99.585	Bos_taurus
ENSGALG00000033064	DDX6	99	99.585	ENSCJAG00000013591	DDX6	99	99.585	Callithrix_jacchus
ENSGALG00000033064	DDX6	99	99.585	ENSCAFG00000012442	DDX6	99	99.585	Canis_familiaris
ENSGALG00000033064	DDX6	99	99.585	ENSCAFG00020013150	DDX6	99	99.585	Canis_lupus_dingo
ENSGALG00000033064	DDX6	99	99.378	ENSCHIG00000026114	DDX6	99	99.378	Capra_hircus
ENSGALG00000033064	DDX6	99	99.585	ENSTSYG00000026313	DDX6	99	99.585	Carlito_syrichta
ENSGALG00000033064	DDX6	81	63.861	ENSCAPG00000013040	DDX6	99	63.861	Cavia_aperea
ENSGALG00000033064	DDX6	99	93.154	ENSCPOG00000010587	Ddx6	99	93.154	Cavia_porcellus
ENSGALG00000033064	DDX6	99	95.436	ENSCCAG00000021636	-	99	95.436	Cebus_capucinus
ENSGALG00000033064	DDX6	99	99.378	ENSCATG00000045025	DDX6	99	99.378	Cercocebus_atys
ENSGALG00000033064	DDX6	99	72.784	ENSCATG00000009414	-	99	71.721	Cercocebus_atys
ENSGALG00000033064	DDX6	99	99.378	ENSCLAG00000016749	DDX6	99	99.378	Chinchilla_lanigera
ENSGALG00000033064	DDX6	99	99.378	ENSCSAG00000002564	DDX6	99	99.378	Chlorocebus_sabaeus
ENSGALG00000033064	DDX6	86	99.518	ENSCHOG00000007565	DDX6	99	99.518	Choloepus_hoffmanni
ENSGALG00000033064	DDX6	99	98.963	ENSCPBG00000004323	DDX6	99	98.963	Chrysemys_picta_bellii
ENSGALG00000033064	DDX6	99	89.212	ENSCANG00000042664	DDX6	99	89.212	Colobus_angolensis_palliatus
ENSGALG00000033064	DDX6	99	99.378	ENSCGRG00001023465	Ddx6	99	99.378	Cricetulus_griseus_chok1gshd
ENSGALG00000033064	DDX6	99	99.378	ENSCGRG00000014165	Ddx6	99	99.378	Cricetulus_griseus_crigri
ENSGALG00000033064	DDX6	99	88.820	ENSCSEG00000006875	ddx6	99	88.820	Cynoglossus_semilaevis
ENSGALG00000033064	DDX6	100	87.785	ENSCVAG00000002540	ddx6	100	87.785	Cyprinodon_variegatus
ENSGALG00000033064	DDX6	99	89.441	ENSDARG00000061338	ddx6	99	89.234	Danio_rerio
ENSGALG00000033064	DDX6	99	94.835	ENSDNOG00000014447	DDX6	99	94.835	Dasypus_novemcinctus
ENSGALG00000033064	DDX6	88	91.059	ENSDORG00000001037	Ddx6	100	91.059	Dipodomys_ordii
ENSGALG00000033064	DDX6	65	99.225	ENSETEG00000007589	-	70	99.225	Echinops_telfairi
ENSGALG00000033064	DDX6	54	87.786	ENSEBUG00000010009	ddx6	71	87.786	Eptatretus_burgeri
ENSGALG00000033064	DDX6	99	99.585	ENSEASG00005004961	DDX6	99	99.585	Equus_asinus_asinus
ENSGALG00000033064	DDX6	99	99.585	ENSECAG00000000539	DDX6	99	99.585	Equus_caballus
ENSGALG00000033064	DDX6	88	90.824	ENSEEUG00000002824	DDX6	100	90.824	Erinaceus_europaeus
ENSGALG00000033064	DDX6	99	85.976	ENSELUG00000022660	ddx6	99	86.992	Esox_lucius
ENSGALG00000033064	DDX6	99	99.585	ENSFCAG00000029360	DDX6	99	99.585	Felis_catus
ENSGALG00000033064	DDX6	100	99.793	ENSFALG00000009831	DDX6	100	99.793	Ficedula_albicollis
ENSGALG00000033064	DDX6	99	99.378	ENSFDAG00000012457	DDX6	99	99.378	Fukomys_damarensis
ENSGALG00000033064	DDX6	100	88.199	ENSFHEG00000021202	ddx6	100	88.223	Fundulus_heteroclitus
ENSGALG00000033064	DDX6	99	86.777	ENSGMOG00000009542	ddx6	99	86.570	Gadus_morhua
ENSGALG00000033064	DDX6	100	87.397	ENSGAFG00000020279	ddx6	100	87.603	Gambusia_affinis
ENSGALG00000033064	DDX6	99	87.785	ENSGACG00000012258	ddx6	99	87.785	Gasterosteus_aculeatus
ENSGALG00000033064	DDX6	99	98.963	ENSGAGG00000020608	DDX6	99	98.963	Gopherus_agassizii
ENSGALG00000033064	DDX6	99	77.226	ENSGGOG00000038856	-	99	77.226	Gorilla_gorilla
ENSGALG00000033064	DDX6	99	69.710	ENSGGOG00000023765	-	99	69.710	Gorilla_gorilla
ENSGALG00000033064	DDX6	99	89.004	ENSGGOG00000016751	DDX6	99	89.004	Gorilla_gorilla
ENSGALG00000033064	DDX6	99	89.627	ENSHBUG00000009651	ddx6	99	89.627	Haplochromis_burtoni
ENSGALG00000033064	DDX6	99	99.585	ENSHGLG00000004316	DDX6	99	99.585	Heterocephalus_glaber_female
ENSGALG00000033064	DDX6	99	99.585	ENSHGLG00100014595	DDX6	99	99.585	Heterocephalus_glaber_male
ENSGALG00000033064	DDX6	99	87.885	ENSHCOG00000012451	ddx6	99	88.296	Hippocampus_comes
ENSGALG00000033064	DDX6	99	87.785	ENSIPUG00000000616	ddx6	99	87.578	Ictalurus_punctatus
ENSGALG00000033064	DDX6	99	99.378	ENSSTOG00000014475	DDX6	99	99.378	Ictidomys_tridecemlineatus
ENSGALG00000033064	DDX6	99	99.378	ENSJJAG00000021630	Ddx6	99	99.378	Jaculus_jaculus
ENSGALG00000033064	DDX6	100	89.027	ENSKMAG00000003546	ddx6	100	89.027	Kryptolebias_marmoratus
ENSGALG00000033064	DDX6	99	83.197	ENSLBEG00000017823	ddx6	99	78.585	Labrus_bergylta
ENSGALG00000033064	DDX6	100	94.021	ENSLACG00000017153	DDX6	100	93.402	Latimeria_chalumnae
ENSGALG00000033064	DDX6	99	89.463	ENSLOCG00000000770	ddx6	99	89.669	Lepisosteus_oculatus
ENSGALG00000033064	DDX6	99	98.963	ENSLAFG00000011012	DDX6	99	98.963	Loxodonta_africana
ENSGALG00000033064	DDX6	99	99.378	ENSMFAG00000042472	DDX6	99	99.378	Macaca_fascicularis
ENSGALG00000033064	DDX6	99	99.378	ENSMMUG00000018651	DDX6	99	99.378	Macaca_mulatta
ENSGALG00000033064	DDX6	99	71.577	ENSMMUG00000047408	-	99	71.577	Macaca_mulatta
ENSGALG00000033064	DDX6	99	99.378	ENSMNEG00000033959	DDX6	99	99.378	Macaca_nemestrina
ENSGALG00000033064	DDX6	99	99.378	ENSMLEG00000028151	DDX6	99	99.378	Mandrillus_leucophaeus
ENSGALG00000033064	DDX6	99	88.367	ENSMAMG00000013732	ddx6	99	87.551	Mastacembelus_armatus
ENSGALG00000033064	DDX6	99	89.834	ENSMZEG00005024098	ddx6	99	89.834	Maylandia_zebra
ENSGALG00000033064	DDX6	100	100.000	ENSMGAG00000004123	DDX6	100	100.000	Meleagris_gallopavo
ENSGALG00000033064	DDX6	99	98.548	ENSMAUG00000008886	Ddx6	99	98.548	Mesocricetus_auratus
ENSGALG00000033064	DDX6	99	99.585	ENSMICG00000011519	DDX6	99	99.585	Microcebus_murinus
ENSGALG00000033064	DDX6	99	99.378	ENSMOCG00000002068	Ddx6	99	99.378	Microtus_ochrogaster
ENSGALG00000033064	DDX6	99	82.195	ENSMMOG00000001233	ddx6	99	81.988	Mola_mola
ENSGALG00000033064	DDX6	99	99.585	ENSMODG00000013375	DDX6	99	99.585	Monodelphis_domestica
ENSGALG00000033064	DDX6	99	84.679	ENSMALG00000009308	ddx6	99	84.472	Monopterus_albus
ENSGALG00000033064	DDX6	99	93.361	MGP_CAROLIEiJ_G0032122	Ddx6	99	93.361	Mus_caroli
ENSGALG00000033064	DDX6	99	97.510	ENSMUSG00000032097	Ddx6	99	97.510	Mus_musculus
ENSGALG00000033064	DDX6	99	97.095	MGP_PahariEiJ_G0014991	Ddx6	99	97.095	Mus_pahari
ENSGALG00000033064	DDX6	99	99.585	ENSMPUG00000004857	DDX6	99	99.585	Mustela_putorius_furo
ENSGALG00000033064	DDX6	99	99.170	ENSMLUG00000003671	DDX6	99	99.170	Myotis_lucifugus
ENSGALG00000033064	DDX6	99	99.378	ENSNGAG00000016848	Ddx6	99	99.378	Nannospalax_galili
ENSGALG00000033064	DDX6	99	80.705	ENSNBRG00000003507	ddx6	99	80.705	Neolamprologus_brichardi
ENSGALG00000033064	DDX6	99	99.378	ENSNLEG00000007372	DDX6	99	99.378	Nomascus_leucogenys
ENSGALG00000033064	DDX6	99	88.589	ENSMEUG00000010556	DDX6	99	88.589	Notamacropus_eugenii
ENSGALG00000033064	DDX6	81	82.097	ENSOPRG00000016112	DDX6	100	82.097	Ochotona_princeps
ENSGALG00000033064	DDX6	99	99.378	ENSODEG00000007950	DDX6	99	99.378	Octodon_degus
ENSGALG00000033064	DDX6	99	89.212	ENSONIG00000005756	ddx6	99	89.627	Oreochromis_niloticus
ENSGALG00000033064	DDX6	88	99.063	ENSOANG00000003751	DDX6	99	99.063	Ornithorhynchus_anatinus
ENSGALG00000033064	DDX6	99	99.170	ENSOCUG00000005849	DDX6	99	99.170	Oryctolagus_cuniculus
ENSGALG00000033064	DDX6	99	88.174	ENSORLG00000002506	ddx6	99	88.382	Oryzias_latipes
ENSGALG00000033064	DDX6	99	88.382	ENSORLG00020016534	ddx6	99	88.589	Oryzias_latipes_hni
ENSGALG00000033064	DDX6	99	88.174	ENSORLG00015005301	ddx6	99	88.382	Oryzias_latipes_hsok
ENSGALG00000033064	DDX6	99	88.174	ENSOMEG00000001347	ddx6	99	88.382	Oryzias_melastigma
ENSGALG00000033064	DDX6	99	99.585	ENSOGAG00000007978	DDX6	99	99.585	Otolemur_garnettii
ENSGALG00000033064	DDX6	99	99.378	ENSOARG00000011455	DDX6	99	99.378	Ovis_aries
ENSGALG00000033064	DDX6	99	78.468	ENSPPAG00000040387	-	99	78.468	Pan_paniscus
ENSGALG00000033064	DDX6	99	99.378	ENSPPAG00000034894	DDX6	99	99.378	Pan_paniscus
ENSGALG00000033064	DDX6	99	68.050	ENSPPAG00000039963	-	99	67.842	Pan_paniscus
ENSGALG00000033064	DDX6	99	99.585	ENSPPRG00000009039	DDX6	99	99.585	Panthera_pardus
ENSGALG00000033064	DDX6	99	99.585	ENSPTIG00000018551	DDX6	99	99.585	Panthera_tigris_altaica
ENSGALG00000033064	DDX6	99	78.261	ENSPTRG00000050136	-	99	78.261	Pan_troglodytes
ENSGALG00000033064	DDX6	99	99.378	ENSPTRG00000004353	DDX6	99	99.378	Pan_troglodytes
ENSGALG00000033064	DDX6	99	69.087	ENSPTRG00000043896	-	99	68.880	Pan_troglodytes
ENSGALG00000033064	DDX6	99	99.378	ENSPANG00000018963	DDX6	99	99.378	Papio_anubis
ENSGALG00000033064	DDX6	99	89.441	ENSPKIG00000013728	ddx6	99	89.441	Paramormyrops_kingsleyae
ENSGALG00000033064	DDX6	99	97.526	ENSPSIG00000013230	DDX6	99	97.526	Pelodiscus_sinensis
ENSGALG00000033064	DDX6	99	77.801	ENSPMGG00000023707	ddx6	99	77.801	Periophthalmus_magnuspinnatus
ENSGALG00000033064	DDX6	99	79.132	ENSPMAG00000007168	ddx6	99	78.882	Petromyzon_marinus
ENSGALG00000033064	DDX6	100	88.017	ENSPFOG00000010555	ddx6	100	88.017	Poecilia_formosa
ENSGALG00000033064	DDX6	100	87.810	ENSPLAG00000019684	ddx6	100	88.017	Poecilia_latipinna
ENSGALG00000033064	DDX6	100	88.017	ENSPMEG00000019775	ddx6	100	88.017	Poecilia_mexicana
ENSGALG00000033064	DDX6	100	87.397	ENSPREG00000016082	ddx6	100	87.603	Poecilia_reticulata
ENSGALG00000033064	DDX6	99	96.058	ENSPPYG00000003942	DDX6	99	96.058	Pongo_abelii
ENSGALG00000033064	DDX6	99	89.834	ENSPCAG00000004767	DDX6	99	89.834	Procavia_capensis
ENSGALG00000033064	DDX6	99	99.585	ENSPCOG00000020762	DDX6	99	99.585	Propithecus_coquereli
ENSGALG00000033064	DDX6	99	91.701	ENSPVAG00000005421	DDX6	99	91.701	Pteropus_vampyrus
ENSGALG00000033064	DDX6	99	89.627	ENSPNYG00000008538	ddx6	99	89.627	Pundamilia_nyererei
ENSGALG00000033064	DDX6	99	70.528	ENSPNAG00000010102	ddx6	99	69.919	Pygocentrus_nattereri
ENSGALG00000033064	DDX6	99	97.925	ENSRNOG00000053932	Ddx6	99	97.925	Rattus_norvegicus
ENSGALG00000033064	DDX6	99	99.378	ENSRBIG00000032545	DDX6	99	99.378	Rhinopithecus_bieti
ENSGALG00000033064	DDX6	99	69.467	ENSRBIG00000038129	-	99	69.262	Rhinopithecus_bieti
ENSGALG00000033064	DDX6	99	68.050	ENSRBIG00000027933	-	99	69.502	Rhinopithecus_bieti
ENSGALG00000033064	DDX6	99	99.378	ENSRROG00000032478	DDX6	99	99.378	Rhinopithecus_roxellana
ENSGALG00000033064	DDX6	99	69.405	ENSRROG00000032664	-	99	69.610	Rhinopithecus_roxellana
ENSGALG00000033064	DDX6	99	72.614	ENSRROG00000034419	-	99	72.614	Rhinopithecus_roxellana
ENSGALG00000033064	DDX6	99	99.585	ENSSBOG00000029671	DDX6	99	99.585	Saimiri_boliviensis_boliviensis
ENSGALG00000033064	DDX6	99	99.585	ENSSHAG00000011424	DDX6	99	99.585	Sarcophilus_harrisii
ENSGALG00000033064	DDX6	99	89.648	ENSSFOG00015023211	ddx6	99	89.648	Scleropages_formosus
ENSGALG00000033064	DDX6	82	49.749	ENSSFOG00015005998	DDX6	97	48.861	Scleropages_formosus
ENSGALG00000033064	DDX6	99	88.613	ENSSMAG00000001253	ddx6	99	88.406	Scophthalmus_maximus
ENSGALG00000033064	DDX6	99	89.855	ENSSDUG00000019695	ddx6	99	89.855	Seriola_dumerili
ENSGALG00000033064	DDX6	99	89.855	ENSSLDG00000006167	ddx6	99	89.855	Seriola_lalandi_dorsalis
ENSGALG00000033064	DDX6	99	99.585	ENSSARG00000003219	DDX6	99	99.585	Sorex_araneus
ENSGALG00000033064	DDX6	94	90.549	ENSSPUG00000004404	DDX6	93	95.283	Sphenodon_punctatus
ENSGALG00000033064	DDX6	99	89.648	ENSSPAG00000023258	ddx6	99	89.648	Stegastes_partitus
ENSGALG00000033064	DDX6	99	99.378	ENSSSCG00000015097	DDX6	99	99.378	Sus_scrofa
ENSGALG00000033064	DDX6	95	97.821	ENSTGUG00000017360	DDX6	100	97.821	Taeniopygia_guttata
ENSGALG00000033064	DDX6	99	88.613	ENSTRUG00000011848	ddx6	99	88.406	Takifugu_rubripes
ENSGALG00000033064	DDX6	99	89.441	ENSTNIG00000016295	ddx6	99	89.234	Tetraodon_nigroviridis
ENSGALG00000033064	DDX6	99	96.473	ENSTTRG00000004313	DDX6	99	96.473	Tursiops_truncatus
ENSGALG00000033064	DDX6	99	99.585	ENSUAMG00000027749	DDX6	99	99.585	Ursus_americanus
ENSGALG00000033064	DDX6	99	99.585	ENSUMAG00000000993	DDX6	99	99.585	Ursus_maritimus
ENSGALG00000033064	DDX6	99	97.303	ENSVPAG00000005601	DDX6	99	97.303	Vicugna_pacos
ENSGALG00000033064	DDX6	99	98.963	ENSVVUG00000024121	DDX6	99	98.963	Vulpes_vulpes
ENSGALG00000033064	DDX6	99	94.387	ENSXETG00000010061	ddx6	99	95.426	Xenopus_tropicalis
ENSGALG00000033064	DDX6	100	80.785	ENSXCOG00000008560	ddx6	100	80.992	Xiphophorus_couchianus
ENSGALG00000033064	DDX6	100	87.603	ENSXMAG00000007620	ddx6	100	87.810	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000932	P-body	-	IEA	Component
GO:0003723	RNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005829	cytosol	-	IEA	Component
GO:0010494	cytoplasmic stress granule	-	IEA	Component
GO:0016442	RISC complex	-	IEA	Component
GO:0019074	viral RNA genome packaging	-	IEA	Process
GO:0019827	stem cell population maintenance	-	IEA	Process
GO:0019904	protein domain specific binding	-	IEA	Function
GO:0033962	cytoplasmic mRNA processing body assembly	-	IEA	Process
GO:0045665	negative regulation of neuron differentiation	-	IEA	Process