EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000033245 (Gene tree)
Gene ID: 770663
Gene Symbol: SMPD2
Alias: ISC1|nSMase
Full Name: sphingomyelin phosphodiesterase 2
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 3444 bases
Position: chr26:40921-44364
Accession: 770663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000053595	Exo_endo_phos	PF03372.23	6.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000066064	SMPD2-201	1558	XM_004934785	ENSGALP00000053595	410 (aa)	XP_001232516	A0A1D5PL80

Gene Model

Click here to download ENSGALG00000033245's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga00600	Sphingolipid metabolism	KEGG
gga01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000033245's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000033245	SMPD2	78	56.386	ENSG00000135587	SMPD2	87	46.067	Homo_sapiens
ENSGALG00000033245	SMPD2	97	51.613	ENSAMEG00000016431	SMPD2	76	58.385	Ailuropoda_melanoleuca
ENSGALG00000033245	SMPD2	98	54.455	ENSACIG00000010069	smpd2b	98	52.518	Amphilophus_citrinellus
ENSGALG00000033245	SMPD2	99	52.644	ENSAOCG00000014544	smpd2b	93	52.289	Amphiprion_ocellaris
ENSGALG00000033245	SMPD2	99	52.885	ENSAPEG00000023764	smpd2b	93	52.530	Amphiprion_percula
ENSGALG00000033245	SMPD2	99	51.084	ENSATEG00000025113	smpd2b	94	50.725	Anabas_testudineus
ENSGALG00000033245	SMPD2	95	64.524	ENSACAG00000009270	SMPD2	96	63.918	Anolis_carolinensis
ENSGALG00000033245	SMPD2	78	56.522	ENSANAG00000028732	SMPD2	76	56.522	Aotus_nancymaae
ENSGALG00000033245	SMPD2	99	53.494	ENSACLG00000022892	smpd2b	93	53.494	Astatotilapia_calliptera
ENSGALG00000033245	SMPD2	98	50.123	ENSAMXG00000013614	smpd2b	94	50.000	Astyanax_mexicanus
ENSGALG00000033245	SMPD2	77	56.875	ENSBTAG00000008145	SMPD2	52	56.875	Bos_taurus
ENSGALG00000033245	SMPD2	97	37.799	WBGene00012105	T27F6.6	76	41.056	Caenorhabditis_elegans
ENSGALG00000033245	SMPD2	78	56.211	ENSCJAG00000005756	SMPD2	76	56.211	Callithrix_jacchus
ENSGALG00000033245	SMPD2	99	50.000	ENSCAFG00000003816	SMPD2	76	57.453	Canis_familiaris
ENSGALG00000033245	SMPD2	77	56.875	ENSCHIG00000022563	SMPD2	76	56.875	Capra_hircus
ENSGALG00000033245	SMPD2	99	49.265	ENSTSYG00000008525	SMPD2	76	56.522	Carlito_syrichta
ENSGALG00000033245	SMPD2	80	48.182	ENSCAPG00000008057	SMPD2	69	57.377	Cavia_aperea
ENSGALG00000033245	SMPD2	78	56.211	ENSCPOG00000003102	SMPD2	75	56.211	Cavia_porcellus
ENSGALG00000033245	SMPD2	78	56.522	ENSCCAG00000036357	SMPD2	76	56.522	Cebus_capucinus
ENSGALG00000033245	SMPD2	78	56.522	ENSCATG00000015266	SMPD2	76	56.522	Cercocebus_atys
ENSGALG00000033245	SMPD2	99	47.140	ENSCLAG00000009948	SMPD2	62	60.424	Chinchilla_lanigera
ENSGALG00000033245	SMPD2	78	56.522	ENSCSAG00000015322	SMPD2	76	56.522	Chlorocebus_sabaeus
ENSGALG00000033245	SMPD2	98	69.500	ENSCPBG00000017837	SMPD2	99	69.500	Chrysemys_picta_bellii
ENSGALG00000033245	SMPD2	78	56.211	ENSCANG00000029491	SMPD2	76	56.211	Colobus_angolensis_palliatus
ENSGALG00000033245	SMPD2	99	49.639	ENSCGRG00001019999	Smpd2	77	57.632	Cricetulus_griseus_chok1gshd
ENSGALG00000033245	SMPD2	99	49.639	ENSCGRG00000008928	Smpd2	77	57.632	Cricetulus_griseus_crigri
ENSGALG00000033245	SMPD2	99	51.208	ENSCSEG00000016030	smpd2b	93	51.208	Cynoglossus_semilaevis
ENSGALG00000033245	SMPD2	99	53.041	ENSCVAG00000020815	smpd2b	93	53.041	Cyprinodon_variegatus
ENSGALG00000033245	SMPD2	97	50.503	ENSDARG00000040523	smpd2a	72	58.306	Danio_rerio
ENSGALG00000033245	SMPD2	99	53.333	ENSDARG00000052701	smpd2b	94	53.333	Danio_rerio
ENSGALG00000033245	SMPD2	77	57.812	ENSDNOG00000003948	SMPD2	75	57.812	Dasypus_novemcinctus
ENSGALG00000033245	SMPD2	95	51.786	ENSDORG00000006485	Smpd2	76	57.143	Dipodomys_ordii
ENSGALG00000033245	SMPD2	65	39.326	FBgn0035421	CG12034	61	39.273	Drosophila_melanogaster
ENSGALG00000033245	SMPD2	98	50.847	ENSEBUG00000002962	smpd2b	77	57.362	Eptatretus_burgeri
ENSGALG00000033245	SMPD2	77	57.812	ENSEASG00005006484	SMPD2	76	57.812	Equus_asinus_asinus
ENSGALG00000033245	SMPD2	77	58.125	ENSECAG00000016972	SMPD2	76	58.125	Equus_caballus
ENSGALG00000033245	SMPD2	99	53.140	ENSELUG00000021534	smpd2b	93	52.542	Esox_lucius
ENSGALG00000033245	SMPD2	78	58.696	ENSFCAG00000006358	SMPD2	76	58.696	Felis_catus
ENSGALG00000033245	SMPD2	99	78.571	ENSFALG00000003639	SMPD2	99	78.571	Ficedula_albicollis
ENSGALG00000033245	SMPD2	99	53.771	ENSFHEG00000017395	smpd2b	93	53.771	Fundulus_heteroclitus
ENSGALG00000033245	SMPD2	98	48.628	ENSGMOG00000015239	smpd2b	94	48.250	Gadus_morhua
ENSGALG00000033245	SMPD2	99	53.771	ENSGAFG00000016345	smpd2b	93	53.771	Gambusia_affinis
ENSGALG00000033245	SMPD2	99	54.015	ENSGACG00000005132	smpd2b	95	53.659	Gasterosteus_aculeatus
ENSGALG00000033245	SMPD2	99	70.864	ENSGAGG00000023942	SMPD2	99	70.864	Gopherus_agassizii
ENSGALG00000033245	SMPD2	78	56.386	ENSGGOG00000003394	SMPD2	76	56.386	Gorilla_gorilla
ENSGALG00000033245	SMPD2	78	55.590	ENSHGLG00000000226	SMPD2	76	55.590	Heterocephalus_glaber_female
ENSGALG00000033245	SMPD2	78	55.590	ENSHGLG00100016698	SMPD2	76	55.590	Heterocephalus_glaber_male
ENSGALG00000033245	SMPD2	99	51.790	ENSHCOG00000001358	smpd2b	97	51.306	Hippocampus_comes
ENSGALG00000033245	SMPD2	97	52.618	ENSIPUG00000024794	smpd2b	94	52.618	Ictalurus_punctatus
ENSGALG00000033245	SMPD2	99	43.564	ENSIPUG00000017284	smpd2a	68	55.396	Ictalurus_punctatus
ENSGALG00000033245	SMPD2	78	56.522	ENSSTOG00000028661	SMPD2	77	56.522	Ictidomys_tridecemlineatus
ENSGALG00000033245	SMPD2	99	49.148	ENSJJAG00000019368	Smpd2	77	57.009	Jaculus_jaculus
ENSGALG00000033245	SMPD2	98	54.237	ENSKMAG00000015753	smpd2b	95	54.187	Kryptolebias_marmoratus
ENSGALG00000033245	SMPD2	97	52.000	ENSLBEG00000024878	smpd2b	92	51.629	Labrus_bergylta
ENSGALG00000033245	SMPD2	97	59.296	ENSLACG00000016351	smpd2b	97	59.296	Latimeria_chalumnae
ENSGALG00000033245	SMPD2	98	55.802	ENSLOCG00000009741	smpd2b	94	55.802	Lepisosteus_oculatus
ENSGALG00000033245	SMPD2	99	47.059	ENSLAFG00000003298	SMPD2	77	53.583	Loxodonta_africana
ENSGALG00000033245	SMPD2	78	56.522	ENSMFAG00000033236	SMPD2	76	56.522	Macaca_fascicularis
ENSGALG00000033245	SMPD2	78	56.522	ENSMNEG00000042401	SMPD2	76	56.522	Macaca_nemestrina
ENSGALG00000033245	SMPD2	66	55.678	ENSMLEG00000039457	SMPD2	73	55.678	Mandrillus_leucophaeus
ENSGALG00000033245	SMPD2	99	53.012	ENSMAMG00000004710	smpd2b	93	52.657	Mastacembelus_armatus
ENSGALG00000033245	SMPD2	99	53.494	ENSMZEG00005002958	smpd2b	93	53.494	Maylandia_zebra
ENSGALG00000033245	SMPD2	100	93.917	ENSMGAG00000006821	SMPD2	100	93.917	Meleagris_gallopavo
ENSGALG00000033245	SMPD2	99	50.860	ENSMAUG00000008721	Smpd2	77	57.944	Mesocricetus_auratus
ENSGALG00000033245	SMPD2	79	56.535	ENSMICG00000014442	SMPD2	78	56.535	Microcebus_murinus
ENSGALG00000033245	SMPD2	99	49.148	ENSMOCG00000019666	Smpd2	77	55.937	Microtus_ochrogaster
ENSGALG00000033245	SMPD2	99	53.041	ENSMMOG00000012679	smpd2b	95	52.195	Mola_mola
ENSGALG00000033245	SMPD2	99	48.931	ENSMODG00000017971	SMPD2	78	55.000	Monodelphis_domestica
ENSGALG00000033245	SMPD2	99	52.404	ENSMALG00000000267	smpd2b	99	52.048	Monopterus_albus
ENSGALG00000033245	SMPD2	99	50.611	MGP_CAROLIEiJ_G0015268	Smpd2	78	57.012	Mus_caroli
ENSGALG00000033245	SMPD2	96	52.261	ENSMUSG00000019822	Smpd2	78	58.232	Mus_musculus
ENSGALG00000033245	SMPD2	99	49.633	MGP_PahariEiJ_G0030686	Smpd2	78	55.793	Mus_pahari
ENSGALG00000033245	SMPD2	96	52.764	MGP_SPRETEiJ_G0016077	Smpd2	78	58.232	Mus_spretus
ENSGALG00000033245	SMPD2	97	51.244	ENSMPUG00000010005	SMPD2	76	57.812	Mustela_putorius_furo
ENSGALG00000033245	SMPD2	99	50.485	ENSMLUG00000003793	SMPD2	78	57.012	Myotis_lucifugus
ENSGALG00000033245	SMPD2	60	62.295	ENSNGAG00000013670	Smpd2	93	62.295	Nannospalax_galili
ENSGALG00000033245	SMPD2	95	53.250	ENSNBRG00000008403	smpd2b	92	53.250	Neolamprologus_brichardi
ENSGALG00000033245	SMPD2	78	56.698	ENSNLEG00000012570	SMPD2	76	56.698	Nomascus_leucogenys
ENSGALG00000033245	SMPD2	97	48.387	ENSMEUG00000004602	SMPD2	76	53.681	Notamacropus_eugenii
ENSGALG00000033245	SMPD2	78	55.901	ENSOPRG00000012612	SMPD2	75	55.901	Ochotona_princeps
ENSGALG00000033245	SMPD2	98	53.415	ENSONIG00000014702	smpd2b	93	53.012	Oreochromis_niloticus
ENSGALG00000033245	SMPD2	78	58.385	ENSOCUG00000008607	SMPD2	76	58.385	Oryctolagus_cuniculus
ENSGALG00000033245	SMPD2	99	51.332	ENSORLG00000006334	smpd2b	92	51.951	Oryzias_latipes
ENSGALG00000033245	SMPD2	99	51.683	ENSORLG00020015231	smpd2b	92	52.451	Oryzias_latipes_hni
ENSGALG00000033245	SMPD2	98	52.058	ENSORLG00015010424	smpd2b	93	52.058	Oryzias_latipes_hsok
ENSGALG00000033245	SMPD2	98	53.641	ENSOMEG00000016121	smpd2b	93	53.641	Oryzias_melastigma
ENSGALG00000033245	SMPD2	99	50.123	ENSOGAG00000015505	SMPD2	78	56.707	Otolemur_garnettii
ENSGALG00000033245	SMPD2	77	52.778	ENSOARG00000010409	SMPD2	76	52.778	Ovis_aries
ENSGALG00000033245	SMPD2	78	56.698	ENSPPAG00000031363	SMPD2	76	56.698	Pan_paniscus
ENSGALG00000033245	SMPD2	77	57.812	ENSPPRG00000000099	SMPD2	76	57.812	Panthera_pardus
ENSGALG00000033245	SMPD2	78	57.632	ENSPTIG00000008954	SMPD2	76	57.632	Panthera_tigris_altaica
ENSGALG00000033245	SMPD2	78	56.698	ENSPTRG00000018484	SMPD2	76	56.698	Pan_troglodytes
ENSGALG00000033245	SMPD2	78	56.522	ENSPANG00000024480	SMPD2	76	56.522	Papio_anubis
ENSGALG00000033245	SMPD2	99	54.634	ENSPKIG00000011322	smpd2a	90	54.634	Paramormyrops_kingsleyae
ENSGALG00000033245	SMPD2	93	53.109	ENSPMGG00000000230	smpd2b	93	53.109	Periophthalmus_magnuspinnatus
ENSGALG00000033245	SMPD2	99	50.369	ENSPEMG00000018109	Smpd2	78	58.255	Peromyscus_maniculatus_bairdii
ENSGALG00000033245	SMPD2	77	59.306	ENSPMAG00000002460	smpd2b	93	58.696	Petromyzon_marinus
ENSGALG00000033245	SMPD2	99	51.683	ENSPCIG00000005984	SMPD2	77	57.485	Phascolarctos_cinereus
ENSGALG00000033245	SMPD2	99	53.528	ENSPFOG00000014164	smpd2b	93	53.528	Poecilia_formosa
ENSGALG00000033245	SMPD2	99	53.528	ENSPLAG00000014950	smpd2b	93	53.528	Poecilia_latipinna
ENSGALG00000033245	SMPD2	99	53.528	ENSPMEG00000002286	smpd2b	93	53.528	Poecilia_mexicana
ENSGALG00000033245	SMPD2	99	53.771	ENSPREG00000012181	smpd2b	93	53.771	Poecilia_reticulata
ENSGALG00000033245	SMPD2	78	55.763	ENSPPYG00000016908	-	56	55.763	Pongo_abelii
ENSGALG00000033245	SMPD2	99	46.793	ENSPCAG00000011808	SMPD2	77	55.763	Procavia_capensis
ENSGALG00000033245	SMPD2	79	56.231	ENSPCOG00000001714	SMPD2	78	56.231	Propithecus_coquereli
ENSGALG00000033245	SMPD2	97	49.876	ENSPVAG00000006556	SMPD2	76	56.832	Pteropus_vampyrus
ENSGALG00000033245	SMPD2	99	53.941	ENSPNYG00000005567	smpd2b	93	53.941	Pundamilia_nyererei
ENSGALG00000033245	SMPD2	99	50.852	ENSPNAG00000007986	smpd2b	93	50.852	Pygocentrus_nattereri
ENSGALG00000033245	SMPD2	99	49.392	ENSRNOG00000000306	Smpd2	76	56.698	Rattus_norvegicus
ENSGALG00000033245	SMPD2	78	56.832	ENSRBIG00000033388	SMPD2	76	56.832	Rhinopithecus_bieti
ENSGALG00000033245	SMPD2	78	56.522	ENSRROG00000037705	SMPD2	76	56.522	Rhinopithecus_roxellana
ENSGALG00000033245	SMPD2	78	56.211	ENSSBOG00000033929	SMPD2	76	56.211	Saimiri_boliviensis_boliviensis
ENSGALG00000033245	SMPD2	99	51.825	ENSSFOG00015022890	smpd2	93	51.825	Scleropages_formosus
ENSGALG00000033245	SMPD2	99	53.735	ENSSMAG00000008963	smpd2b	94	53.382	Scophthalmus_maximus
ENSGALG00000033245	SMPD2	97	53.448	ENSSDUG00000000098	smpd2b	92	53.202	Seriola_dumerili
ENSGALG00000033245	SMPD2	97	54.660	ENSSLDG00000009497	smpd2b	92	54.660	Seriola_lalandi_dorsalis
ENSGALG00000033245	SMPD2	99	50.123	ENSSARG00000006192	SMPD2	76	57.321	Sorex_araneus
ENSGALG00000033245	SMPD2	99	68.796	ENSSPUG00000013852	SMPD2	99	68.473	Sphenodon_punctatus
ENSGALG00000033245	SMPD2	99	54.087	ENSSPAG00000001844	smpd2b	93	53.735	Stegastes_partitus
ENSGALG00000033245	SMPD2	78	57.764	ENSSSCG00000004408	SMPD2	76	57.764	Sus_scrofa
ENSGALG00000033245	SMPD2	99	76.108	ENSTGUG00000001713	SMPD2	100	76.108	Taeniopygia_guttata
ENSGALG00000033245	SMPD2	99	52.439	ENSTRUG00000025701	smpd2b	95	52.439	Takifugu_rubripes
ENSGALG00000033245	SMPD2	98	52.605	ENSTNIG00000018297	smpd2b	100	52.605	Tetraodon_nigroviridis
ENSGALG00000033245	SMPD2	77	57.321	ENSTBEG00000009336	SMPD2	76	57.321	Tupaia_belangeri
ENSGALG00000033245	SMPD2	78	54.037	ENSTTRG00000004183	SMPD2	76	54.037	Tursiops_truncatus
ENSGALG00000033245	SMPD2	97	51.365	ENSUAMG00000018011	SMPD2	76	58.075	Ursus_americanus
ENSGALG00000033245	SMPD2	88	49.731	ENSUMAG00000025505	SMPD2	70	56.701	Ursus_maritimus
ENSGALG00000033245	SMPD2	98	47.891	ENSXETG00000000421	smpd2	81	53.538	Xenopus_tropicalis
ENSGALG00000033245	SMPD2	94	53.747	ENSXCOG00000015987	smpd2b	92	53.608	Xiphophorus_couchianus
ENSGALG00000033245	SMPD2	99	53.041	ENSXMAG00000018088	smpd2b	93	53.041	Xiphophorus_maculatus