EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000033259 (Gene tree)
Gene ID: 423265
Gene Symbol: SRSF5A
Alias: -
Full Name: Gallus gallus serine/arginine-rich splicing factor 5a (SRSF5A)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 16677 bases
Position: chr5:28513728-28530404
Accession: NM_001006476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000047413	RRM_1	PF00076.22	8.3e-34	1	2
ENSGALP00000047413	RRM_1	PF00076.22	8.3e-34	2	2
ENSGALP00000047413	RRM_3	PF08777.11	4.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000075254	-	2315	-	ENSGALP00000047413	278 (aa)	XP_015142809	A0A1D5P407

Gene Model

Click here to download ENSGALG00000033259's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG
gga05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000033259's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000033259	SRSF5A	63	75.543	ENSAPOG00000017395	srsf5a	62	78.261	Acanthochromis_polyacanthus
ENSGALG00000033259	SRSF5A	63	73.797	ENSACIG00000011892	srsf5a	96	71.642	Amphilophus_citrinellus
ENSGALG00000033259	SRSF5A	63	75.410	ENSAOCG00000014967	srsf5a	62	78.689	Amphiprion_ocellaris
ENSGALG00000033259	SRSF5A	63	75.410	ENSAPEG00000009297	srsf5a	62	78.689	Amphiprion_percula
ENSGALG00000033259	SRSF5A	63	75.401	ENSATEG00000000198	srsf5a	65	77.005	Anabas_testudineus
ENSGALG00000033259	SRSF5A	63	97.191	ENSAPLG00000002469	-	70	97.191	Anas_platyrhynchos
ENSGALG00000033259	SRSF5A	63	84.270	ENSACAG00000029015	-	68	84.831	Anolis_carolinensis
ENSGALG00000033259	SRSF5A	63	71.728	ENSACLG00000027166	srsf5a	65	72.775	Astatotilapia_calliptera
ENSGALG00000033259	SRSF5A	63	78.378	ENSAMXG00000030476	srsf5a	67	79.459	Astyanax_mexicanus
ENSGALG00000033259	SRSF5A	90	76.285	ENSCPBG00000021518	-	70	88.827	Chrysemys_picta_bellii
ENSGALG00000033259	SRSF5A	63	54.082	ENSCSAVG00000011376	-	82	55.340	Ciona_savignyi
ENSGALG00000033259	SRSF5A	63	72.021	ENSCSEG00000008109	srsf5a	64	71.000	Cynoglossus_semilaevis
ENSGALG00000033259	SRSF5A	62	68.085	ENSCVAG00000016982	srsf5a	96	64.662	Cyprinodon_variegatus
ENSGALG00000033259	SRSF5A	64	77.660	ENSDARG00000029818	srsf5a	100	73.684	Danio_rerio
ENSGALG00000033259	SRSF5A	100	96.416	ENSFALG00000005098	-	100	96.416	Ficedula_albicollis
ENSGALG00000033259	SRSF5A	63	71.429	ENSFHEG00000003955	srsf5a	97	62.069	Fundulus_heteroclitus
ENSGALG00000033259	SRSF5A	63	76.836	ENSGMOG00000000869	srsf5a	94	77.966	Gadus_morhua
ENSGALG00000033259	SRSF5A	63	70.286	ENSGAFG00000018237	srsf5a	60	71.204	Gambusia_affinis
ENSGALG00000033259	SRSF5A	63	77.528	ENSGACG00000011761	srsf5a	70	77.654	Gasterosteus_aculeatus
ENSGALG00000033259	SRSF5A	90	75.889	ENSGAGG00000007312	-	70	88.268	Gopherus_agassizii
ENSGALG00000033259	SRSF5A	63	72.105	ENSHBUG00000014048	srsf5a	64	73.158	Haplochromis_burtoni
ENSGALG00000033259	SRSF5A	63	74.731	ENSHCOG00000017557	srsf5a	62	76.882	Hippocampus_comes
ENSGALG00000033259	SRSF5A	99	66.553	ENSIPUG00000003439	srsf5a	69	75.789	Ictalurus_punctatus
ENSGALG00000033259	SRSF5A	63	70.745	ENSKMAG00000014937	srsf5a	58	71.809	Kryptolebias_marmoratus
ENSGALG00000033259	SRSF5A	63	70.769	ENSLBEG00000017153	srsf5a	74	71.282	Labrus_bergylta
ENSGALG00000033259	SRSF5A	63	80.000	ENSLACG00000017874	-	70	80.556	Latimeria_chalumnae
ENSGALG00000033259	SRSF5A	63	79.459	ENSLOCG00000014075	srsf5a	61	80.000	Lepisosteus_oculatus
ENSGALG00000033259	SRSF5A	63	77.348	ENSMAMG00000000192	srsf5a	65	78.453	Mastacembelus_armatus
ENSGALG00000033259	SRSF5A	63	72.105	ENSMZEG00005010485	srsf5a	64	73.158	Maylandia_zebra
ENSGALG00000033259	SRSF5A	90	95.600	ENSMGAG00000011888	-	96	100.000	Meleagris_gallopavo
ENSGALG00000033259	SRSF5A	63	78.889	ENSMMOG00000009793	srsf5a	61	80.000	Mola_mola
ENSGALG00000033259	SRSF5A	63	77.714	ENSMALG00000021194	srsf5a	63	77.143	Monopterus_albus
ENSGALG00000033259	SRSF5A	63	72.487	ENSNBRG00000000771	srsf5a	64	73.545	Neolamprologus_brichardi
ENSGALG00000033259	SRSF5A	63	72.487	ENSONIG00000019583	srsf5a	64	73.545	Oreochromis_niloticus
ENSGALG00000033259	SRSF5A	67	72.775	ENSORLG00000009268	srsf5a	77	67.401	Oryzias_latipes
ENSGALG00000033259	SRSF5A	64	75.000	ENSORLG00020003281	srsf5	77	67.401	Oryzias_latipes_hni
ENSGALG00000033259	SRSF5A	64	75.000	ENSORLG00015023075	srsf5	77	67.401	Oryzias_latipes_hsok
ENSGALG00000033259	SRSF5A	63	77.222	ENSOMEG00000000628	srsf5a	66	78.333	Oryzias_melastigma
ENSGALG00000033259	SRSF5A	74	72.811	ENSPKIG00000002054	srsf5a	72	77.041	Paramormyrops_kingsleyae
ENSGALG00000033259	SRSF5A	63	89.266	ENSPSIG00000008238	-	69	89.266	Pelodiscus_sinensis
ENSGALG00000033259	SRSF5A	63	74.863	ENSPMGG00000020125	srsf5a	66	66.968	Periophthalmus_magnuspinnatus
ENSGALG00000033259	SRSF5A	63	69.634	ENSPFOG00000022993	srsf5a	65	70.048	Poecilia_formosa
ENSGALG00000033259	SRSF5A	63	69.474	ENSPLAG00000005508	srsf5a	64	69.903	Poecilia_latipinna
ENSGALG00000033259	SRSF5A	63	69.634	ENSPMEG00000016339	srsf5a	65	70.048	Poecilia_mexicana
ENSGALG00000033259	SRSF5A	63	69.271	ENSPREG00000018091	srsf5a	66	69.712	Poecilia_reticulata
ENSGALG00000033259	SRSF5A	63	72.105	ENSPNYG00000021245	srsf5a	64	73.158	Pundamilia_nyererei
ENSGALG00000033259	SRSF5A	63	78.261	ENSPNAG00000021333	srsf5a	66	78.804	Pygocentrus_nattereri
ENSGALG00000033259	SRSF5A	63	78.495	ENSSFOG00015008377	srsf5	66	79.032	Scleropages_formosus
ENSGALG00000033259	SRSF5A	63	69.500	ENSSMAG00000010899	srsf5a	66	70.000	Scophthalmus_maximus
ENSGALG00000033259	SRSF5A	63	75.824	ENSSDUG00000006103	srsf5a	63	79.121	Seriola_dumerili
ENSGALG00000033259	SRSF5A	63	75.824	ENSSLDG00000004146	srsf5a	63	79.121	Seriola_lalandi_dorsalis
ENSGALG00000033259	SRSF5A	95	71.642	ENSSPUG00000002052	-	68	83.708	Sphenodon_punctatus
ENSGALG00000033259	SRSF5A	63	76.503	ENSSPAG00000002821	srsf5a	63	78.689	Stegastes_partitus
ENSGALG00000033259	SRSF5A	93	95.769	ENSTGUG00000011492	-	100	95.769	Taeniopygia_guttata
ENSGALG00000033259	SRSF5A	63	73.438	ENSTRUG00000022908	srsf5a	65	74.479	Takifugu_rubripes
ENSGALG00000033259	SRSF5A	99	66.436	ENSXETG00000017937	srsf5a	72	77.660	Xenopus_tropicalis
ENSGALG00000033259	SRSF5A	63	71.123	ENSXCOG00000015338	srsf5a	65	67.677	Xiphophorus_couchianus
ENSGALG00000033259	SRSF5A	63	68.912	ENSXMAG00000012823	srsf5a	66	69.378	Xiphophorus_maculatus