EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000033772 (Gene tree)
Gene ID: 419100
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 47953 bases
Position: chr1:6753645-6801597
Accession: 419100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000052359	Upf2	PF04050.14	3.5e-33	1	1
ENSGALP00000052359	MIF4G	PF02854.19	1.4e-76	1	3
ENSGALP00000052359	MIF4G	PF02854.19	1.4e-76	2	3
ENSGALP00000052359	MIF4G	PF02854.19	1.4e-76	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000070595	UPF2-201	3837	-	ENSGALP00000052359	1272 (aa)	XP_015153153	A0A1D5PHS9

Gene Model

Click here to download ENSGALG00000033772's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03013	RNA transport	KEGG
gga03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000033772's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000033772	UPF2	100	93.244	ENSG00000151461	UPF2	100	93.244	Homo_sapiens
ENSGALG00000033772	UPF2	99	80.094	ENSAPOG00000015837	UPF2	100	79.186	Acanthochromis_polyacanthus
ENSGALG00000033772	UPF2	100	94.261	ENSAMEG00000004586	UPF2	100	94.261	Ailuropoda_melanoleuca
ENSGALG00000033772	UPF2	99	83.763	ENSACIG00000018078	UPF2	100	83.997	Amphilophus_citrinellus
ENSGALG00000033772	UPF2	100	83.904	ENSAOCG00000016766	UPF2	100	84.178	Amphiprion_ocellaris
ENSGALG00000033772	UPF2	100	83.981	ENSAPEG00000019084	UPF2	100	84.256	Amphiprion_percula
ENSGALG00000033772	UPF2	100	83.761	ENSATEG00000021677	UPF2	99	83.916	Anabas_testudineus
ENSGALG00000033772	UPF2	100	91.444	ENSAPLG00000010287	UPF2	90	95.052	Anas_platyrhynchos
ENSGALG00000033772	UPF2	100	93.239	ENSACAG00000009259	UPF2	100	93.239	Anolis_carolinensis
ENSGALG00000033772	UPF2	99	83.333	ENSANAG00000028451	UPF2	99	83.346	Aotus_nancymaae
ENSGALG00000033772	UPF2	100	82.541	ENSACLG00000012696	UPF2	100	84.412	Astatotilapia_calliptera
ENSGALG00000033772	UPF2	99	83.450	ENSAMXG00000013700	UPF2	99	83.346	Astyanax_mexicanus
ENSGALG00000033772	UPF2	100	94.104	ENSBTAG00000000288	UPF2	100	100.000	Bos_taurus
ENSGALG00000033772	UPF2	100	92.767	ENSCJAG00000020685	UPF2	100	92.767	Callithrix_jacchus
ENSGALG00000033772	UPF2	100	94.261	ENSCAFG00000004839	UPF2	100	94.261	Canis_familiaris
ENSGALG00000033772	UPF2	99	92.047	ENSCAFG00020005882	UPF2	98	93.577	Canis_lupus_dingo
ENSGALG00000033772	UPF2	100	94.182	ENSCHIG00000020359	UPF2	100	94.182	Capra_hircus
ENSGALG00000033772	UPF2	100	93.396	ENSTSYG00000000935	UPF2	97	97.159	Carlito_syrichta
ENSGALG00000033772	UPF2	91	83.835	ENSCAPG00000016658	UPF2	94	83.534	Cavia_aperea
ENSGALG00000033772	UPF2	99	90.261	ENSCPOG00000008809	UPF2	100	91.211	Cavia_porcellus
ENSGALG00000033772	UPF2	100	85.849	ENSCCAG00000035991	UPF2	100	87.264	Cebus_capucinus
ENSGALG00000033772	UPF2	100	93.480	ENSCATG00000032679	UPF2	100	93.480	Cercocebus_atys
ENSGALG00000033772	UPF2	100	92.060	ENSCLAG00000011434	UPF2	100	93.003	Chinchilla_lanigera
ENSGALG00000033772	UPF2	100	93.480	ENSCSAG00000013372	UPF2	100	93.480	Chlorocebus_sabaeus
ENSGALG00000033772	UPF2	87	96.214	ENSCHOG00000000422	UPF2	89	96.214	Choloepus_hoffmanni
ENSGALG00000033772	UPF2	99	94.961	ENSCPBG00000027823	UPF2	100	94.646	Chrysemys_picta_bellii
ENSGALG00000033772	UPF2	79	49.360	ENSCSAVG00000007772	-	79	50.513	Ciona_savignyi
ENSGALG00000033772	UPF2	99	87.432	ENSCANG00000040396	UPF2	100	88.050	Colobus_angolensis_palliatus
ENSGALG00000033772	UPF2	100	94.025	ENSCGRG00001019347	Upf2	100	93.553	Cricetulus_griseus_chok1gshd
ENSGALG00000033772	UPF2	100	94.025	ENSCGRG00000017993	Upf2	100	93.553	Cricetulus_griseus_crigri
ENSGALG00000033772	UPF2	99	78.583	ENSCSEG00000003520	UPF2	99	79.291	Cynoglossus_semilaevis
ENSGALG00000033772	UPF2	99	83.320	ENSCVAG00000006167	UPF2	100	83.281	Cyprinodon_variegatus
ENSGALG00000033772	UPF2	100	94.025	ENSDNOG00000018160	UPF2	100	94.025	Dasypus_novemcinctus
ENSGALG00000033772	UPF2	100	93.003	ENSDORG00000002478	Upf2	100	92.531	Dipodomys_ordii
ENSGALG00000033772	UPF2	90	36.289	FBgn0029992	Upf2	73	39.760	Drosophila_melanogaster
ENSGALG00000033772	UPF2	72	98.529	ENSETEG00000011583	-	66	98.529	Echinops_telfairi
ENSGALG00000033772	UPF2	69	69.242	ENSEBUG00000012448	-	87	73.154	Eptatretus_burgeri
ENSGALG00000033772	UPF2	100	92.138	ENSEASG00005019274	UPF2	100	95.370	Equus_asinus_asinus
ENSGALG00000033772	UPF2	100	92.453	ENSECAG00000017022	UPF2	100	93.396	Equus_caballus
ENSGALG00000033772	UPF2	82	91.374	ENSEEUG00000007819	UPF2	77	91.374	Erinaceus_europaeus
ENSGALG00000033772	UPF2	99	82.673	ENSELUG00000012014	UPF2	100	83.294	Esox_lucius
ENSGALG00000033772	UPF2	100	96.685	ENSFCAG00000005785	UPF2	100	94.261	Felis_catus
ENSGALG00000033772	UPF2	100	97.642	ENSFALG00000001889	UPF2	98	97.642	Ficedula_albicollis
ENSGALG00000033772	UPF2	100	91.431	ENSFDAG00000014348	UPF2	100	91.903	Fukomys_damarensis
ENSGALG00000033772	UPF2	99	83.451	ENSFHEG00000009826	UPF2	100	83.412	Fundulus_heteroclitus
ENSGALG00000033772	UPF2	91	83.751	ENSGMOG00000005557	UPF2	100	81.392	Gadus_morhua
ENSGALG00000033772	UPF2	100	82.893	ENSGAFG00000020867	UPF2	100	83.087	Gambusia_affinis
ENSGALG00000033772	UPF2	90	85.172	ENSGACG00000001080	UPF2	100	82.500	Gasterosteus_aculeatus
ENSGALG00000033772	UPF2	100	95.440	ENSGAGG00000002700	UPF2	100	95.440	Gopherus_agassizii
ENSGALG00000033772	UPF2	100	93.244	ENSGGOG00000001479	UPF2	100	93.244	Gorilla_gorilla
ENSGALG00000033772	UPF2	100	82.385	ENSHBUG00000004249	UPF2	100	84.387	Haplochromis_burtoni
ENSGALG00000033772	UPF2	100	91.981	ENSHGLG00000015176	-	100	92.767	Heterocephalus_glaber_female
ENSGALG00000033772	UPF2	99	81.825	ENSHGLG00000003822	-	99	81.432	Heterocephalus_glaber_female
ENSGALG00000033772	UPF2	88	94.434	ENSHGLG00100010036	UPF2	94	90.427	Heterocephalus_glaber_male
ENSGALG00000033772	UPF2	100	81.366	ENSHCOG00000004025	UPF2	99	81.599	Hippocampus_comes
ENSGALG00000033772	UPF2	100	82.853	ENSIPUG00000015524	UPF2	100	82.215	Ictalurus_punctatus
ENSGALG00000033772	UPF2	100	93.632	ENSSTOG00000013075	UPF2	100	93.160	Ictidomys_tridecemlineatus
ENSGALG00000033772	UPF2	100	92.374	ENSJJAG00000004913	Upf2	100	91.588	Jaculus_jaculus
ENSGALG00000033772	UPF2	99	83.333	ENSKMAG00000001071	UPF2	100	83.373	Kryptolebias_marmoratus
ENSGALG00000033772	UPF2	80	82.711	ENSLBEG00000000728	-	93	83.104	Labrus_bergylta
ENSGALG00000033772	UPF2	100	83.528	ENSLBEG00000016394	-	99	83.813	Labrus_bergylta
ENSGALG00000033772	UPF2	99	80.893	ENSLACG00000015945	UPF2	100	81.363	Latimeria_chalumnae
ENSGALG00000033772	UPF2	99	87.480	ENSLOCG00000015698	UPF2	100	87.402	Lepisosteus_oculatus
ENSGALG00000033772	UPF2	100	93.480	ENSMFAG00000043865	UPF2	100	93.480	Macaca_fascicularis
ENSGALG00000033772	UPF2	100	93.480	ENSMMUG00000008241	UPF2	100	93.480	Macaca_mulatta
ENSGALG00000033772	UPF2	81	92.593	ENSMNEG00000008062	UPF2	99	92.857	Macaca_nemestrina
ENSGALG00000033772	UPF2	95	96.386	ENSMLEG00000036120	UPF2	100	96.618	Mandrillus_leucophaeus
ENSGALG00000033772	UPF2	100	83.904	ENSMAMG00000018276	UPF2	100	83.683	Mastacembelus_armatus
ENSGALG00000033772	UPF2	100	82.541	ENSMZEG00005021595	UPF2	100	84.412	Maylandia_zebra
ENSGALG00000033772	UPF2	99	98.505	ENSMGAG00000004573	UPF2	99	98.505	Meleagris_gallopavo
ENSGALG00000033772	UPF2	100	91.745	ENSMAUG00000016512	Upf2	100	91.274	Mesocricetus_auratus
ENSGALG00000033772	UPF2	95	96.939	ENSMICG00000001716	UPF2	99	96.923	Microcebus_murinus
ENSGALG00000033772	UPF2	100	91.981	ENSMOCG00000008263	Upf2	100	92.846	Microtus_ochrogaster
ENSGALG00000033772	UPF2	90	84.201	ENSMMOG00000006528	UPF2	100	80.829	Mola_mola
ENSGALG00000033772	UPF2	100	94.654	ENSMODG00000016794	UPF2	100	94.654	Monodelphis_domestica
ENSGALG00000033772	UPF2	99	83.672	ENSMALG00000002663	UPF2	100	83.959	Monopterus_albus
ENSGALG00000033772	UPF2	100	93.160	MGP_CAROLIEiJ_G0023157	Upf2	100	93.905	Mus_caroli
ENSGALG00000033772	UPF2	100	93.711	ENSMUSG00000043241	Upf2	99	96.190	Mus_musculus
ENSGALG00000033772	UPF2	100	93.396	MGP_PahariEiJ_G0019217	Upf2	100	96.000	Mus_pahari
ENSGALG00000033772	UPF2	100	93.947	MGP_SPRETEiJ_G0024075	Upf2	100	96.190	Mus_spretus
ENSGALG00000033772	UPF2	100	94.182	ENSMPUG00000001064	UPF2	100	94.182	Mustela_putorius_furo
ENSGALG00000033772	UPF2	99	93.564	ENSMLUG00000000228	UPF2	100	93.485	Myotis_lucifugus
ENSGALG00000033772	UPF2	100	82.541	ENSNBRG00000013629	UPF2	100	84.412	Neolamprologus_brichardi
ENSGALG00000033772	UPF2	100	93.244	ENSNLEG00000012058	UPF2	100	93.244	Nomascus_leucogenys
ENSGALG00000033772	UPF2	58	100.000	ENSMEUG00000002180	-	60	100.000	Notamacropus_eugenii
ENSGALG00000033772	UPF2	82	98.592	ENSOPRG00000006801	-	78	98.592	Ochotona_princeps
ENSGALG00000033772	UPF2	100	92.217	ENSODEG00000001290	UPF2	100	93.160	Octodon_degus
ENSGALG00000033772	UPF2	100	82.541	ENSONIG00000017991	UPF2	100	84.412	Oreochromis_niloticus
ENSGALG00000033772	UPF2	99	92.169	ENSOCUG00000006230	UPF2	100	92.717	Oryctolagus_cuniculus
ENSGALG00000033772	UPF2	100	83.113	ENSORLG00000017189	UPF2	100	83.229	Oryzias_latipes
ENSGALG00000033772	UPF2	100	83.113	ENSORLG00020005969	UPF2	100	83.307	Oryzias_latipes_hni
ENSGALG00000033772	UPF2	100	83.113	ENSORLG00015005713	UPF2	100	83.307	Oryzias_latipes_hsok
ENSGALG00000033772	UPF2	99	79.875	ENSOMEG00000023420	UPF2	98	80.688	Oryzias_melastigma
ENSGALG00000033772	UPF2	100	93.868	ENSOGAG00000005796	UPF2	100	93.868	Otolemur_garnettii
ENSGALG00000033772	UPF2	100	94.035	ENSOARG00000014587	UPF2	100	94.035	Ovis_aries
ENSGALG00000033772	UPF2	99	89.531	ENSPPAG00000037953	UPF2	100	90.244	Pan_paniscus
ENSGALG00000033772	UPF2	100	94.261	ENSPPRG00000000690	UPF2	100	94.261	Panthera_pardus
ENSGALG00000033772	UPF2	100	94.261	ENSPTIG00000008867	UPF2	100	94.261	Panthera_tigris_altaica
ENSGALG00000033772	UPF2	100	93.244	ENSPTRG00000002291	UPF2	100	93.244	Pan_troglodytes
ENSGALG00000033772	UPF2	100	93.480	ENSPANG00000023399	UPF2	100	93.480	Papio_anubis
ENSGALG00000033772	UPF2	100	83.164	ENSPKIG00000025502	UPF2	100	83.320	Paramormyrops_kingsleyae
ENSGALG00000033772	UPF2	59	94.960	ENSPSIG00000015158	UPF2	95	94.960	Pelodiscus_sinensis
ENSGALG00000033772	UPF2	99	81.162	ENSPMGG00000005259	UPF2	100	81.947	Periophthalmus_magnuspinnatus
ENSGALG00000033772	UPF2	93	91.545	ENSPEMG00000015731	Upf2	99	91.545	Peromyscus_maniculatus_bairdii
ENSGALG00000033772	UPF2	100	94.497	ENSPCIG00000006656	UPF2	100	94.497	Phascolarctos_cinereus
ENSGALG00000033772	UPF2	100	82.931	ENSPFOG00000017118	UPF2	100	83.242	Poecilia_formosa
ENSGALG00000033772	UPF2	100	82.893	ENSPLAG00000005094	UPF2	100	83.242	Poecilia_latipinna
ENSGALG00000033772	UPF2	100	82.893	ENSPMEG00000017009	UPF2	100	83.242	Poecilia_mexicana
ENSGALG00000033772	UPF2	99	82.748	ENSPREG00000021880	UPF2	100	83.333	Poecilia_reticulata
ENSGALG00000033772	UPF2	66	94.863	ENSPPYG00000002089	-	100	94.863	Pongo_abelii
ENSGALG00000033772	UPF2	100	80.346	ENSPCAG00000000684	UPF2	100	80.346	Procavia_capensis
ENSGALG00000033772	UPF2	99	91.024	ENSPCOG00000021656	UPF2	100	91.181	Propithecus_coquereli
ENSGALG00000033772	UPF2	100	86.724	ENSPVAG00000017286	UPF2	100	86.724	Pteropus_vampyrus
ENSGALG00000033772	UPF2	99	80.016	ENSPNYG00000017096	UPF2	100	81.889	Pundamilia_nyererei
ENSGALG00000033772	UPF2	100	84.100	ENSPNAG00000009357	UPF2	100	84.022	Pygocentrus_nattereri
ENSGALG00000033772	UPF2	99	88.540	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSGALG00000033772	UPF2	99	92.047	ENSRBIG00000037780	UPF2	100	91.575	Rhinopithecus_bieti
ENSGALG00000033772	UPF2	100	92.930	ENSRROG00000043547	UPF2	100	92.459	Rhinopithecus_roxellana
ENSGALG00000033772	UPF2	100	92.138	ENSSBOG00000020012	UPF2	100	91.667	Saimiri_boliviensis_boliviensis
ENSGALG00000033772	UPF2	100	83.242	ENSSFOG00015023788	upf2	100	84.256	Scleropages_formosus
ENSGALG00000033772	UPF2	90	83.824	ENSSMAG00000007637	UPF2	100	82.016	Scophthalmus_maximus
ENSGALG00000033772	UPF2	100	83.670	ENSSDUG00000017244	UPF2	99	84.100	Seriola_dumerili
ENSGALG00000033772	UPF2	99	82.201	ENSSLDG00000016866	UPF2	100	82.081	Seriola_lalandi_dorsalis
ENSGALG00000033772	UPF2	100	92.374	ENSSARG00000008615	UPF2	100	92.374	Sorex_araneus
ENSGALG00000033772	UPF2	99	91.896	ENSSPUG00000014544	UPF2	99	91.896	Sphenodon_punctatus
ENSGALG00000033772	UPF2	68	95.287	ENSSSCG00000011117	-	100	95.287	Sus_scrofa
ENSGALG00000033772	UPF2	99	97.400	ENSTGUG00000002163	-	100	97.400	Taeniopygia_guttata
ENSGALG00000033772	UPF2	100	82.737	ENSTRUG00000007519	UPF2	99	83.009	Takifugu_rubripes
ENSGALG00000033772	UPF2	93	85.787	ENSTBEG00000012679	UPF2	93	85.279	Tupaia_belangeri
ENSGALG00000033772	UPF2	100	92.060	ENSTTRG00000016388	UPF2	100	93.475	Tursiops_truncatus
ENSGALG00000033772	UPF2	92	97.222	ENSUAMG00000023560	UPF2	98	100.000	Ursus_americanus
ENSGALG00000033772	UPF2	100	94.261	ENSUMAG00000012953	UPF2	95	94.261	Ursus_maritimus
ENSGALG00000033772	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSGALG00000033772	UPF2	100	94.261	ENSVVUG00000006166	UPF2	100	94.261	Vulpes_vulpes
ENSGALG00000033772	UPF2	100	84.730	ENSXETG00000033103	UPF2	91	89.455	Xenopus_tropicalis
ENSGALG00000033772	UPF2	99	82.399	ENSXCOG00000011604	UPF2	100	82.904	Xiphophorus_couchianus
ENSGALG00000033772	UPF2	100	82.659	ENSXMAG00000017209	UPF2	100	82.931	Xiphophorus_maculatus