EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000033965 (Gene tree)
Gene ID: 418492
Gene Symbol: SCAF4
Alias: SFRS15
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 43597 bases
Position: chr1:106003474-106047070
Accession: 418492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000051107	RRM_1	PF00076.22	7.1e-09	1	1
ENSGALP00000053040	RRM_1	PF00076.22	7.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000068388	SCAF4-202	3327	XM_015299359	ENSGALP00000053040	1108 (aa)	XP_015154845	A0A1D5PJP4
ENSGALT00000074844	SCAF4-201	3279	-	ENSGALP00000051107	1092 (aa)	-	A0A1D5PEA6

Gene Model

Click here to download ENSGALG00000033965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000033965's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000033965	SCAF4	59	83.537	ENSG00000156304	SCAF4	100	76.537	Homo_sapiens
ENSGALG00000033965	SCAF4	86	53.429	ENSAPOG00000002946	scaf4a	58	60.496	Acanthochromis_polyacanthus
ENSGALG00000033965	SCAF4	86	52.875	ENSAOCG00000000615	scaf4a	59	58.757	Amphiprion_ocellaris
ENSGALG00000033965	SCAF4	86	52.875	ENSAPEG00000021229	scaf4a	59	58.616	Amphiprion_percula
ENSGALG00000033965	SCAF4	99	94.858	ENSAPLG00000002509	SCAF4	100	94.123	Anas_platyrhynchos
ENSGALG00000033965	SCAF4	94	77.404	ENSACAG00000002569	SCAF4	95	76.867	Anolis_carolinensis
ENSGALG00000033965	SCAF4	59	83.689	ENSANAG00000037494	SCAF4	100	76.384	Aotus_nancymaae
ENSGALG00000033965	SCAF4	93	52.936	ENSAMXG00000008585	scaf4a	61	64.006	Astyanax_mexicanus
ENSGALG00000033965	SCAF4	59	83.537	ENSBTAG00000018855	SCAF4	100	76.629	Bos_taurus
ENSGALG00000033965	SCAF4	59	83.817	ENSCJAG00000008993	SCAF4	99	80.815	Callithrix_jacchus
ENSGALG00000033965	SCAF4	58	83.359	ENSCAFG00000008863	SCAF4	100	77.337	Canis_familiaris
ENSGALG00000033965	SCAF4	58	79.937	ENSCAFG00020026019	SCAF4	100	74.727	Canis_lupus_dingo
ENSGALG00000033965	SCAF4	59	82.576	ENSCHIG00000008385	SCAF4	100	76.476	Capra_hircus
ENSGALG00000033965	SCAF4	59	81.900	ENSCPOG00000012443	SCAF4	100	74.261	Cavia_porcellus
ENSGALG00000033965	SCAF4	59	83.817	ENSCCAG00000033727	SCAF4	100	76.603	Cebus_capucinus
ENSGALG00000033965	SCAF4	58	84.469	ENSCATG00000030379	SCAF4	100	76.740	Cercocebus_atys
ENSGALG00000033965	SCAF4	99	71.175	ENSCLAG00000006298	SCAF4	100	74.525	Chinchilla_lanigera
ENSGALG00000033965	SCAF4	59	82.953	ENSCSAG00000009438	SCAF4	100	76.252	Chlorocebus_sabaeus
ENSGALG00000033965	SCAF4	59	83.537	ENSCANG00000029847	SCAF4	100	76.603	Colobus_angolensis_palliatus
ENSGALG00000033965	SCAF4	59	71.290	ENSCGRG00001020821	Scaf4	100	74.202	Cricetulus_griseus_chok1gshd
ENSGALG00000033965	SCAF4	58	70.711	ENSCGRG00000014360	Scaf4	100	73.854	Cricetulus_griseus_crigri
ENSGALG00000033965	SCAF4	86	49.602	ENSCSEG00000019549	scaf4a	57	54.252	Cynoglossus_semilaevis
ENSGALG00000033965	SCAF4	89	51.300	ENSDARG00000077093	scaf4a	59	56.973	Danio_rerio
ENSGALG00000033965	SCAF4	60	77.912	ENSDNOG00000019014	SCAF4	94	73.550	Dasypus_novemcinctus
ENSGALG00000033965	SCAF4	60	65.564	ENSETEG00000000583	SCAF4	99	65.670	Echinops_telfairi
ENSGALG00000033965	SCAF4	59	83.639	ENSEASG00005007756	SCAF4	100	77.352	Equus_asinus_asinus
ENSGALG00000033965	SCAF4	59	83.639	ENSECAG00000014248	SCAF4	100	77.285	Equus_caballus
ENSGALG00000033965	SCAF4	59	83.030	ENSFCAG00000002228	SCAF4	100	77.056	Felis_catus
ENSGALG00000033965	SCAF4	62	78.121	ENSFDAG00000017780	SCAF4	100	73.797	Fukomys_damarensis
ENSGALG00000033965	SCAF4	92	78.243	ENSGGOG00000015557	SCAF4	100	83.507	Gorilla_gorilla
ENSGALG00000033965	SCAF4	59	81.465	ENSHGLG00000010582	SCAF4	100	75.690	Heterocephalus_glaber_female
ENSGALG00000033965	SCAF4	58	81.221	ENSHGLG00100009441	SCAF4	100	75.480	Heterocephalus_glaber_male
ENSGALG00000033965	SCAF4	61	53.623	ENSIPUG00000011285	scaf4	65	64.590	Ictalurus_punctatus
ENSGALG00000033965	SCAF4	58	72.643	ENSSTOG00000004450	SCAF4	100	70.939	Ictidomys_tridecemlineatus
ENSGALG00000033965	SCAF4	99	67.986	ENSJJAG00000019447	Scaf4	99	74.406	Jaculus_jaculus
ENSGALG00000033965	SCAF4	64	58.519	ENSKMAG00000005742	scaf4b	56	73.563	Kryptolebias_marmoratus
ENSGALG00000033965	SCAF4	97	63.047	ENSLACG00000013913	SCAF4	100	64.991	Latimeria_chalumnae
ENSGALG00000033965	SCAF4	97	59.494	ENSLOCG00000009162	scaf4a	99	58.400	Lepisosteus_oculatus
ENSGALG00000033965	SCAF4	59	90.837	ENSLAFG00000010710	SCAF4	99	79.762	Loxodonta_africana
ENSGALG00000033965	SCAF4	58	84.469	ENSMFAG00000037668	SCAF4	100	76.010	Macaca_fascicularis
ENSGALG00000033965	SCAF4	59	83.384	ENSMMUG00000001712	SCAF4	100	75.924	Macaca_mulatta
ENSGALG00000033965	SCAF4	58	84.469	ENSMNEG00000032966	SCAF4	100	76.667	Macaca_nemestrina
ENSGALG00000033965	SCAF4	58	83.282	ENSMLEG00000039674	SCAF4	100	76.087	Mandrillus_leucophaeus
ENSGALG00000033965	SCAF4	99	99.077	ENSMGAG00000014515	SCAF4	100	99.077	Meleagris_gallopavo
ENSGALG00000033965	SCAF4	62	80.523	ENSMAUG00000013307	Scaf4	100	74.956	Mesocricetus_auratus
ENSGALG00000033965	SCAF4	59	83.333	ENSMICG00000005256	SCAF4	100	76.629	Microcebus_murinus
ENSGALG00000033965	SCAF4	99	69.324	ENSMOCG00000012087	Scaf4	99	75.258	Microtus_ochrogaster
ENSGALG00000033965	SCAF4	100	79.066	ENSMODG00000021040	SCAF4	100	79.425	Monodelphis_domestica
ENSGALG00000033965	SCAF4	59	76.276	MGP_CAROLIEiJ_G0020944	Scaf4	99	75.321	Mus_caroli
ENSGALG00000033965	SCAF4	59	75.134	ENSMUSG00000022983	Scaf4	99	75.321	Mus_musculus
ENSGALG00000033965	SCAF4	57	87.121	MGP_PahariEiJ_G0016649	Scaf4	100	75.765	Mus_pahari
ENSGALG00000033965	SCAF4	59	71.884	MGP_SPRETEiJ_G0021850	Scaf4	99	75.321	Mus_spretus
ENSGALG00000033965	SCAF4	59	82.192	ENSMPUG00000001078	SCAF4	100	75.924	Mustela_putorius_furo
ENSGALG00000033965	SCAF4	59	73.286	ENSMLUG00000011472	SCAF4	77	72.606	Myotis_lucifugus
ENSGALG00000033965	SCAF4	58	81.748	ENSNGAG00000005214	Scaf4	99	75.895	Nannospalax_galili
ENSGALG00000033965	SCAF4	59	83.232	ENSNLEG00000003569	SCAF4	100	76.537	Nomascus_leucogenys
ENSGALG00000033965	SCAF4	84	75.000	ENSOPRG00000007016	SCAF4	79	75.943	Ochotona_princeps
ENSGALG00000033965	SCAF4	86	55.236	ENSONIG00000004687	scaf4a	67	58.848	Oreochromis_niloticus
ENSGALG00000033965	SCAF4	59	82.549	ENSOCUG00000008336	SCAF4	100	74.310	Oryctolagus_cuniculus
ENSGALG00000033965	SCAF4	50	58.798	ENSORLG00020013853	scaf4b	80	49.701	Oryzias_latipes_hni
ENSGALG00000033965	SCAF4	99	45.939	ENSORLG00020011857	scaf4a	57	56.844	Oryzias_latipes_hni
ENSGALG00000033965	SCAF4	89	47.559	ENSORLG00015017880	scaf4a	57	58.964	Oryzias_latipes_hsok
ENSGALG00000033965	SCAF4	70	55.190	ENSOMEG00000014482	scaf4a	56	59.610	Oryzias_melastigma
ENSGALG00000033965	SCAF4	58	86.513	ENSOGAG00000014653	SCAF4	94	74.375	Otolemur_garnettii
ENSGALG00000033965	SCAF4	58	81.846	ENSOARG00000013894	SCAF4	99	76.000	Ovis_aries
ENSGALG00000033965	SCAF4	59	83.537	ENSPPAG00000028535	SCAF4	100	76.537	Pan_paniscus
ENSGALG00000033965	SCAF4	58	83.179	ENSPPRG00000000635	SCAF4	100	77.153	Panthera_pardus
ENSGALG00000033965	SCAF4	58	84.069	ENSPTIG00000021578	SCAF4	99	75.755	Panthera_tigris_altaica
ENSGALG00000033965	SCAF4	59	83.537	ENSPTRG00000013848	SCAF4	100	76.537	Pan_troglodytes
ENSGALG00000033965	SCAF4	59	83.384	ENSPANG00000017332	SCAF4	100	76.010	Papio_anubis
ENSGALG00000033965	SCAF4	66	63.061	ENSPKIG00000022408	scaf4a	96	64.236	Paramormyrops_kingsleyae
ENSGALG00000033965	SCAF4	99	89.279	ENSPSIG00000014242	SCAF4	99	87.307	Pelodiscus_sinensis
ENSGALG00000033965	SCAF4	63	85.693	ENSPCIG00000028183	SCAF4	91	79.667	Phascolarctos_cinereus
ENSGALG00000033965	SCAF4	64	59.452	ENSPLAG00000001972	scaf4a	81	57.223	Poecilia_latipinna
ENSGALG00000033965	SCAF4	62	54.380	ENSPLAG00000004403	-	59	60.784	Poecilia_latipinna
ENSGALG00000033965	SCAF4	59	83.384	ENSPPYG00000011355	SCAF4	100	76.384	Pongo_abelii
ENSGALG00000033965	SCAF4	89	88.214	ENSPCAG00000009998	SCAF4	92	88.278	Procavia_capensis
ENSGALG00000033965	SCAF4	99	74.291	ENSPCOG00000018710	SCAF4	99	77.471	Propithecus_coquereli
ENSGALG00000033965	SCAF4	100	75.874	ENSPVAG00000005220	SCAF4	100	76.849	Pteropus_vampyrus
ENSGALG00000033965	SCAF4	52	56.705	ENSPNYG00000010526	scaf4b	62	71.978	Pundamilia_nyererei
ENSGALG00000033965	SCAF4	63	67.778	ENSRNOG00000002104	Scaf4	99	75.578	Rattus_norvegicus
ENSGALG00000033965	SCAF4	58	82.567	ENSRBIG00000040007	SCAF4	100	75.460	Rhinopithecus_bieti
ENSGALG00000033965	SCAF4	59	83.257	ENSRROG00000029488	SCAF4	100	76.756	Rhinopithecus_roxellana
ENSGALG00000033965	SCAF4	100	78.038	ENSSHAG00000001581	SCAF4	99	80.203	Sarcophilus_harrisii
ENSGALG00000033965	SCAF4	86	50.653	ENSSFOG00015006338	scaf4a	98	51.008	Scleropages_formosus
ENSGALG00000033965	SCAF4	72	60.148	ENSSMAG00000003738	scaf4b	65	61.321	Scophthalmus_maximus
ENSGALG00000033965	SCAF4	92	47.527	ENSSMAG00000017901	scaf4a	56	54.381	Scophthalmus_maximus
ENSGALG00000033965	SCAF4	85	52.183	ENSSDUG00000012918	scaf4a	58	58.509	Seriola_dumerili
ENSGALG00000033965	SCAF4	85	52.390	ENSSLDG00000021671	scaf4a	57	59.590	Seriola_lalandi_dorsalis
ENSGALG00000033965	SCAF4	59	82.689	ENSSARG00000009994	SCAF4	100	74.913	Sorex_araneus
ENSGALG00000033965	SCAF4	59	82.530	ENSSSCG00000021023	SCAF4	100	74.377	Sus_scrofa
ENSGALG00000033965	SCAF4	77	94.444	ENSTGUG00000013464	SCAF4	95	89.600	Taeniopygia_guttata
ENSGALG00000033965	SCAF4	53	55.482	ENSTRUG00000009536	-	69	56.561	Takifugu_rubripes
ENSGALG00000033965	SCAF4	58	84.137	ENSTTRG00000010963	SCAF4	100	77.269	Tursiops_truncatus
ENSGALG00000033965	SCAF4	59	83.614	ENSUAMG00000008860	SCAF4	100	76.512	Ursus_americanus
ENSGALG00000033965	SCAF4	58	84.127	ENSUMAG00000016962	SCAF4	100	79.269	Ursus_maritimus
ENSGALG00000033965	SCAF4	58	83.386	ENSVVUG00000002953	SCAF4	100	77.305	Vulpes_vulpes
ENSGALG00000033965	SCAF4	99	58.566	ENSXETG00000007351	scaf4	99	57.568	Xenopus_tropicalis