EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000034316 (Gene tree)
Gene ID: 416293
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 26948 bases
Position: chr13:14554411-14581358
Accession: 416293
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000046628	Exo_endo_phos	PF03372.23	4.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000067166	CNOT6-201	3062	-	ENSGALP00000046628	557 (aa)	XP_015149428	A0A1D5P1T8

Gene Model

Click here to download ENSGALG00000034316's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000034316's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000034316	CNOT6	100	95.691	ENSG00000113300	CNOT6	100	97.368	Homo_sapiens
ENSGALG00000034316	CNOT6	100	87.835	ENSAPOG00000009994	cnot6b	100	87.478	Acanthochromis_polyacanthus
ENSGALG00000034316	CNOT6	100	96.422	ENSAMEG00000000949	CNOT6	99	96.422	Ailuropoda_melanoleuca
ENSGALG00000034316	CNOT6	100	86.762	ENSACIG00000016566	cnot6b	100	86.404	Amphilophus_citrinellus
ENSGALG00000034316	CNOT6	100	87.835	ENSAOCG00000006893	cnot6b	100	87.478	Amphiprion_ocellaris
ENSGALG00000034316	CNOT6	100	87.835	ENSAPEG00000016949	cnot6b	100	87.478	Amphiprion_percula
ENSGALG00000034316	CNOT6	100	86.047	ENSATEG00000007862	cnot6b	100	85.689	Anabas_testudineus
ENSGALG00000034316	CNOT6	100	99.461	ENSAPLG00000012715	CNOT6	99	99.461	Anas_platyrhynchos
ENSGALG00000034316	CNOT6	100	95.512	ENSACAG00000016548	CNOT6	100	95.512	Anolis_carolinensis
ENSGALG00000034316	CNOT6	100	96.050	ENSANAG00000030436	CNOT6	96	96.050	Aotus_nancymaae
ENSGALG00000034316	CNOT6	100	85.689	ENSACLG00000008279	cnot6b	100	86.225	Astatotilapia_calliptera
ENSGALG00000034316	CNOT6	100	87.993	ENSAMXG00000019140	cnot6a	100	87.993	Astyanax_mexicanus
ENSGALG00000034316	CNOT6	100	86.201	ENSAMXG00000034694	cnot6b	100	86.201	Astyanax_mexicanus
ENSGALG00000034316	CNOT6	100	96.230	ENSBTAG00000017362	CNOT6	100	96.230	Bos_taurus
ENSGALG00000034316	CNOT6	100	95.871	ENSCJAG00000009795	CNOT6	100	95.871	Callithrix_jacchus
ENSGALG00000034316	CNOT6	100	96.589	ENSCAFG00000000464	CNOT6	100	96.589	Canis_familiaris
ENSGALG00000034316	CNOT6	100	96.589	ENSCAFG00020002441	CNOT6	100	96.589	Canis_lupus_dingo
ENSGALG00000034316	CNOT6	100	96.050	ENSCHIG00000019100	CNOT6	100	96.050	Capra_hircus
ENSGALG00000034316	CNOT6	100	94.614	ENSTSYG00000003982	CNOT6	100	94.614	Carlito_syrichta
ENSGALG00000034316	CNOT6	100	90.844	ENSCPOG00000035657	CNOT6	100	90.844	Cavia_porcellus
ENSGALG00000034316	CNOT6	100	91.382	ENSCCAG00000033670	CNOT6	100	91.382	Cebus_capucinus
ENSGALG00000034316	CNOT6	100	95.691	ENSCATG00000042014	CNOT6	100	95.691	Cercocebus_atys
ENSGALG00000034316	CNOT6	100	94.434	ENSCLAG00000010489	CNOT6	100	94.434	Chinchilla_lanigera
ENSGALG00000034316	CNOT6	100	95.691	ENSCSAG00000008165	CNOT6	100	95.691	Chlorocebus_sabaeus
ENSGALG00000034316	CNOT6	100	95.871	ENSCHOG00000009680	CNOT6	100	95.871	Choloepus_hoffmanni
ENSGALG00000034316	CNOT6	100	98.205	ENSCPBG00000008908	CNOT6	100	98.205	Chrysemys_picta_bellii
ENSGALG00000034316	CNOT6	100	95.871	ENSCANG00000026756	CNOT6	100	95.871	Colobus_angolensis_palliatus
ENSGALG00000034316	CNOT6	100	94.255	ENSCGRG00001011452	Cnot6	100	94.255	Cricetulus_griseus_chok1gshd
ENSGALG00000034316	CNOT6	100	92.639	ENSCGRG00000010407	Cnot6	100	92.639	Cricetulus_griseus_crigri
ENSGALG00000034316	CNOT6	100	86.941	ENSCSEG00000010939	cnot6b	100	86.583	Cynoglossus_semilaevis
ENSGALG00000034316	CNOT6	100	86.380	ENSCVAG00000010538	cnot6b	100	86.022	Cyprinodon_variegatus
ENSGALG00000034316	CNOT6	100	84.946	ENSDARG00000101072	cnot6b	100	84.946	Danio_rerio
ENSGALG00000034316	CNOT6	100	87.276	ENSDARG00000008255	cnot6a	100	87.276	Danio_rerio
ENSGALG00000034316	CNOT6	100	96.589	ENSDNOG00000041644	CNOT6	100	96.589	Dasypus_novemcinctus
ENSGALG00000034316	CNOT6	100	85.099	ENSDORG00000001708	Cnot6	100	85.099	Dipodomys_ordii
ENSGALG00000034316	CNOT6	100	77.102	ENSETEG00000006975	CNOT6	100	77.102	Echinops_telfairi
ENSGALG00000034316	CNOT6	90	90.200	ENSEASG00005012957	-	99	90.200	Equus_asinus_asinus
ENSGALG00000034316	CNOT6	100	95.691	ENSEASG00005012794	-	100	95.691	Equus_asinus_asinus
ENSGALG00000034316	CNOT6	100	89.767	ENSECAG00000012704	-	99	89.767	Equus_caballus
ENSGALG00000034316	CNOT6	100	96.409	ENSECAG00000019325	CNOT6	100	96.409	Equus_caballus
ENSGALG00000034316	CNOT6	100	95.153	ENSEEUG00000015382	CNOT6	100	95.153	Erinaceus_europaeus
ENSGALG00000034316	CNOT6	100	83.951	ENSELUG00000015981	cnot6b	99	83.245	Esox_lucius
ENSGALG00000034316	CNOT6	100	83.513	ENSELUG00000024580	cnot6a	100	83.513	Esox_lucius
ENSGALG00000034316	CNOT6	100	96.589	ENSFCAG00000001881	CNOT6	100	96.589	Felis_catus
ENSGALG00000034316	CNOT6	100	99.820	ENSFALG00000007699	CNOT6	100	99.820	Ficedula_albicollis
ENSGALG00000034316	CNOT6	100	94.434	ENSFDAG00000001999	CNOT6	100	94.434	Fukomys_damarensis
ENSGALG00000034316	CNOT6	65	90.476	ENSFHEG00000013756	cnot6b	96	90.476	Fundulus_heteroclitus
ENSGALG00000034316	CNOT6	95	86.011	ENSGMOG00000009767	cnot6b	99	86.011	Gadus_morhua
ENSGALG00000034316	CNOT6	100	86.559	ENSGAFG00000008525	cnot6b	100	86.201	Gambusia_affinis
ENSGALG00000034316	CNOT6	95	84.121	ENSGACG00000018046	cnot6b	99	84.121	Gasterosteus_aculeatus
ENSGALG00000034316	CNOT6	100	81.688	ENSGAGG00000012176	CNOT6	100	81.688	Gopherus_agassizii
ENSGALG00000034316	CNOT6	100	95.691	ENSGGOG00000003675	CNOT6	100	95.691	Gorilla_gorilla
ENSGALG00000034316	CNOT6	100	85.868	ENSHBUG00000002819	cnot6b	100	86.404	Haplochromis_burtoni
ENSGALG00000034316	CNOT6	100	94.614	ENSHGLG00000017756	CNOT6	100	94.614	Heterocephalus_glaber_female
ENSGALG00000034316	CNOT6	100	94.614	ENSHGLG00100005747	CNOT6	100	94.614	Heterocephalus_glaber_male
ENSGALG00000034316	CNOT6	100	84.436	ENSHCOG00000016176	cnot6b	100	84.973	Hippocampus_comes
ENSGALG00000034316	CNOT6	100	85.484	ENSIPUG00000017482	cnot6b	100	85.484	Ictalurus_punctatus
ENSGALG00000034316	CNOT6	100	86.738	ENSIPUG00000019831	cnot6a	100	86.738	Ictalurus_punctatus
ENSGALG00000034316	CNOT6	100	96.589	ENSSTOG00000002803	CNOT6	100	96.589	Ictidomys_tridecemlineatus
ENSGALG00000034316	CNOT6	100	94.614	ENSJJAG00000012296	Cnot6	100	94.614	Jaculus_jaculus
ENSGALG00000034316	CNOT6	100	87.097	ENSKMAG00000004640	cnot6b	100	86.738	Kryptolebias_marmoratus
ENSGALG00000034316	CNOT6	100	84.794	ENSLBEG00000027917	cnot6b	100	85.331	Labrus_bergylta
ENSGALG00000034316	CNOT6	100	91.398	ENSLOCG00000010102	cnot6b	99	91.398	Lepisosteus_oculatus
ENSGALG00000034316	CNOT6	100	96.948	ENSLAFG00000016742	CNOT6	100	96.948	Loxodonta_africana
ENSGALG00000034316	CNOT6	100	95.691	ENSMFAG00000030867	CNOT6	100	95.691	Macaca_fascicularis
ENSGALG00000034316	CNOT6	100	95.691	ENSMMUG00000018690	CNOT6	100	95.691	Macaca_mulatta
ENSGALG00000034316	CNOT6	100	95.691	ENSMNEG00000038565	CNOT6	100	95.691	Macaca_nemestrina
ENSGALG00000034316	CNOT6	100	95.691	ENSMLEG00000010555	CNOT6	100	95.691	Mandrillus_leucophaeus
ENSGALG00000034316	CNOT6	100	88.014	ENSMAMG00000007515	cnot6b	100	87.657	Mastacembelus_armatus
ENSGALG00000034316	CNOT6	100	85.689	ENSMZEG00005012899	cnot6b	100	86.225	Maylandia_zebra
ENSGALG00000034316	CNOT6	100	95.332	ENSMAUG00000019798	Cnot6	100	95.332	Mesocricetus_auratus
ENSGALG00000034316	CNOT6	100	94.255	ENSMICG00000013018	-	100	94.255	Microcebus_murinus
ENSGALG00000034316	CNOT6	98	85.662	ENSMICG00000028378	-	99	85.662	Microcebus_murinus
ENSGALG00000034316	CNOT6	100	95.153	ENSMOCG00000021662	Cnot6	100	95.153	Microtus_ochrogaster
ENSGALG00000034316	CNOT6	100	84.767	ENSMMOG00000003227	cnot6b	100	84.767	Mola_mola
ENSGALG00000034316	CNOT6	100	97.307	ENSMODG00000003979	CNOT6	100	97.307	Monodelphis_domestica
ENSGALG00000034316	CNOT6	100	87.657	ENSMALG00000014251	cnot6b	100	87.299	Monopterus_albus
ENSGALG00000034316	CNOT6	100	95.332	MGP_CAROLIEiJ_G0016277	Cnot6	100	95.332	Mus_caroli
ENSGALG00000034316	CNOT6	100	95.332	ENSMUSG00000020362	Cnot6	100	95.332	Mus_musculus
ENSGALG00000034316	CNOT6	100	95.332	MGP_PahariEiJ_G0017413	Cnot6	100	95.332	Mus_pahari
ENSGALG00000034316	CNOT6	100	95.153	MGP_SPRETEiJ_G0017122	Cnot6	100	95.153	Mus_spretus
ENSGALG00000034316	CNOT6	100	96.589	ENSMPUG00000000587	CNOT6	96	96.589	Mustela_putorius_furo
ENSGALG00000034316	CNOT6	100	94.484	ENSMLUG00000010257	CNOT6	100	94.484	Myotis_lucifugus
ENSGALG00000034316	CNOT6	100	94.075	ENSNGAG00000008269	Cnot6	100	94.075	Nannospalax_galili
ENSGALG00000034316	CNOT6	100	85.868	ENSNBRG00000010798	cnot6b	100	86.404	Neolamprologus_brichardi
ENSGALG00000034316	CNOT6	100	94.434	ENSNLEG00000002322	CNOT6	100	94.434	Nomascus_leucogenys
ENSGALG00000034316	CNOT6	81	97.196	ENSMEUG00000000025	CNOT6	81	97.196	Notamacropus_eugenii
ENSGALG00000034316	CNOT6	88	94.988	ENSOPRG00000008244	-	88	94.988	Ochotona_princeps
ENSGALG00000034316	CNOT6	100	93.537	ENSODEG00000007041	CNOT6	100	93.537	Octodon_degus
ENSGALG00000034316	CNOT6	75	86.288	ENSONIG00000013027	cnot6b	99	86.288	Oreochromis_niloticus
ENSGALG00000034316	CNOT6	100	95.691	ENSOANG00000010226	CNOT6	100	95.691	Ornithorhynchus_anatinus
ENSGALG00000034316	CNOT6	100	95.528	ENSOCUG00000011083	CNOT6	100	95.528	Oryctolagus_cuniculus
ENSGALG00000034316	CNOT6	100	86.225	ENSORLG00000005059	cnot6b	100	85.868	Oryzias_latipes
ENSGALG00000034316	CNOT6	100	86.225	ENSORLG00020012784	cnot6b	100	85.868	Oryzias_latipes_hni
ENSGALG00000034316	CNOT6	94	85.277	ENSORLG00015022658	cnot6b	98	84.895	Oryzias_latipes_hsok
ENSGALG00000034316	CNOT6	100	86.404	ENSOMEG00000005295	cnot6b	100	86.047	Oryzias_melastigma
ENSGALG00000034316	CNOT6	94	95.802	ENSOGAG00000032470	CNOT6	100	95.802	Otolemur_garnettii
ENSGALG00000034316	CNOT6	97	95.941	ENSOARG00000001003	CNOT6	100	95.941	Ovis_aries
ENSGALG00000034316	CNOT6	100	95.691	ENSPPAG00000032253	CNOT6	100	95.691	Pan_paniscus
ENSGALG00000034316	CNOT6	100	96.409	ENSPPRG00000011912	CNOT6	100	96.409	Panthera_pardus
ENSGALG00000034316	CNOT6	100	96.409	ENSPTIG00000016794	CNOT6	100	96.409	Panthera_tigris_altaica
ENSGALG00000034316	CNOT6	100	95.691	ENSPTRG00000017636	CNOT6	100	95.691	Pan_troglodytes
ENSGALG00000034316	CNOT6	100	95.691	ENSPANG00000016191	CNOT6	100	95.691	Papio_anubis
ENSGALG00000034316	CNOT6	100	88.172	ENSPKIG00000021368	cnot6b	100	88.172	Paramormyrops_kingsleyae
ENSGALG00000034316	CNOT6	98	98.529	ENSPSIG00000017307	CNOT6	100	98.529	Pelodiscus_sinensis
ENSGALG00000034316	CNOT6	100	86.583	ENSPMGG00000011238	cnot6b	100	86.225	Periophthalmus_magnuspinnatus
ENSGALG00000034316	CNOT6	100	94.075	ENSPEMG00000000627	Cnot6	100	94.075	Peromyscus_maniculatus_bairdii
ENSGALG00000034316	CNOT6	100	97.307	ENSPCIG00000020319	CNOT6	99	97.307	Phascolarctos_cinereus
ENSGALG00000034316	CNOT6	100	86.380	ENSPFOG00000006291	cnot6b	100	86.022	Poecilia_formosa
ENSGALG00000034316	CNOT6	100	82.796	ENSPLAG00000008266	cnot6b	100	82.437	Poecilia_latipinna
ENSGALG00000034316	CNOT6	100	86.559	ENSPMEG00000009091	cnot6b	100	86.201	Poecilia_mexicana
ENSGALG00000034316	CNOT6	100	85.484	ENSPREG00000003713	cnot6b	100	85.125	Poecilia_reticulata
ENSGALG00000034316	CNOT6	100	95.691	ENSPPYG00000016137	CNOT6	100	95.691	Pongo_abelii
ENSGALG00000034316	CNOT6	71	94.737	ENSPCAG00000005599	-	71	94.737	Procavia_capensis
ENSGALG00000034316	CNOT6	100	90.485	ENSPCOG00000017359	CNOT6	100	91.203	Propithecus_coquereli
ENSGALG00000034316	CNOT6	100	91.741	ENSPVAG00000003069	CNOT6	100	91.741	Pteropus_vampyrus
ENSGALG00000034316	CNOT6	100	85.510	ENSPNYG00000000321	cnot6b	100	86.047	Pundamilia_nyererei
ENSGALG00000034316	CNOT6	100	87.634	ENSPNAG00000029586	cnot6a	100	87.634	Pygocentrus_nattereri
ENSGALG00000034316	CNOT6	100	86.380	ENSPNAG00000028816	cnot6b	100	86.380	Pygocentrus_nattereri
ENSGALG00000034316	CNOT6	100	94.255	ENSRNOG00000054891	Cnot6	100	94.255	Rattus_norvegicus
ENSGALG00000034316	CNOT6	100	95.512	ENSRBIG00000004309	CNOT6	100	95.512	Rhinopithecus_bieti
ENSGALG00000034316	CNOT6	100	95.512	ENSRROG00000035378	CNOT6	100	95.512	Rhinopithecus_roxellana
ENSGALG00000034316	CNOT6	100	95.871	ENSSBOG00000030494	CNOT6	100	95.871	Saimiri_boliviensis_boliviensis
ENSGALG00000034316	CNOT6	100	97.487	ENSSHAG00000017436	CNOT6	100	97.487	Sarcophilus_harrisii
ENSGALG00000034316	CNOT6	100	87.455	ENSSFOG00015022383	cnot6a	96	87.455	Scleropages_formosus
ENSGALG00000034316	CNOT6	100	89.785	ENSSFOG00015015133	CNOT6	100	89.785	Scleropages_formosus
ENSGALG00000034316	CNOT6	100	85.689	ENSSMAG00000003084	cnot6b	100	85.331	Scophthalmus_maximus
ENSGALG00000034316	CNOT6	100	87.478	ENSSDUG00000004151	cnot6b	100	87.120	Seriola_dumerili
ENSGALG00000034316	CNOT6	100	86.583	ENSSLDG00000004448	cnot6b	100	87.120	Seriola_lalandi_dorsalis
ENSGALG00000034316	CNOT6	64	77.095	ENSSARG00000012650	-	100	77.095	Sorex_araneus
ENSGALG00000034316	CNOT6	100	98.205	ENSSPUG00000007893	CNOT6	100	98.205	Sphenodon_punctatus
ENSGALG00000034316	CNOT6	100	87.657	ENSSPAG00000000149	cnot6b	100	87.299	Stegastes_partitus
ENSGALG00000034316	CNOT6	100	96.050	ENSSSCG00000014009	CNOT6	100	96.104	Sus_scrofa
ENSGALG00000034316	CNOT6	100	99.461	ENSTGUG00000001119	CNOT6	100	99.461	Taeniopygia_guttata
ENSGALG00000034316	CNOT6	100	84.740	ENSTRUG00000002818	cnot6b	100	84.740	Takifugu_rubripes
ENSGALG00000034316	CNOT6	100	85.099	ENSTNIG00000004443	cnot6b	99	85.099	Tetraodon_nigroviridis
ENSGALG00000034316	CNOT6	87	66.530	ENSTBEG00000017094	-	100	66.530	Tupaia_belangeri
ENSGALG00000034316	CNOT6	100	96.230	ENSTTRG00000009363	CNOT6	100	96.230	Tursiops_truncatus
ENSGALG00000034316	CNOT6	77	96.270	ENSUAMG00000004579	CNOT6	88	96.270	Ursus_americanus
ENSGALG00000034316	CNOT6	100	92.123	ENSUMAG00000024577	CNOT6	100	92.123	Ursus_maritimus
ENSGALG00000034316	CNOT6	83	94.159	ENSVPAG00000003593	CNOT6	83	94.159	Vicugna_pacos
ENSGALG00000034316	CNOT6	100	96.589	ENSVVUG00000026940	CNOT6	100	96.589	Vulpes_vulpes
ENSGALG00000034316	CNOT6	100	83.154	ENSXCOG00000003360	cnot6b	100	82.796	Xiphophorus_couchianus
ENSGALG00000034316	CNOT6	100	86.559	ENSXMAG00000008730	cnot6b	100	86.201	Xiphophorus_maculatus