EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000034325 (Gene tree)
Gene ID: 416645
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 268101 bases
Position: chr14:11259785-11527885
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000053578	Fox-1_C	PF12414.8	4.2e-41	1	1
ENSGALP00000071680	Fox-1_C	PF12414.8	5.4e-41	1	1
ENSGALP00000054157	Fox-1_C	PF12414.8	6.3e-41	1	1
ENSGALP00000068939	Fox-1_C	PF12414.8	3.3e-39	1	1
ENSGALP00000068195	Fox-1_C	PF12414.8	2.3e-20	1	1
ENSGALP00000054157	RRM_1	PF00076.22	2.6e-18	1	1
ENSGALP00000068195	RRM_1	PF00076.22	3e-18	1	1
ENSGALP00000071680	RRM_1	PF00076.22	4.9e-18	1	1
ENSGALP00000053578	RRM_1	PF00076.22	5.3e-18	1	1
ENSGALP00000068939	RRM_1	PF00076.22	5.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000091863	RBFOX1-202	1224	-	ENSGALP00000068195	407 (aa)	-	-
ENSGALT00000091244	RBFOX1-201	1257	-	ENSGALP00000068939	418 (aa)	-	-
ENSGALT00000100932	RBFOX1-205	1387	-	ENSGALP00000071680	379 (aa)	-	-
ENSGALT00000067353	RBFOX1-203	1242	-	ENSGALP00000054157	413 (aa)	-	A0A1D5PMS0
ENSGALT00000068753	RBFOX1-204	1161	-	ENSGALP00000053578	386 (aa)	-	A0A1D5PL64

Gene Model

Click here to download ENSGALG00000034325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000034325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000034325	RBFOX1	100	93.301	ENSG00000078328	RBFOX1	100	93.301	Homo_sapiens
ENSGALG00000034325	RBFOX1	98	71.526	ENSAPOG00000003197	rbfox1	98	74.146	Acanthochromis_polyacanthus
ENSGALG00000034325	RBFOX1	62	91.915	ENSAMEG00000008605	RBFOX1	100	92.000	Ailuropoda_melanoleuca
ENSGALG00000034325	RBFOX1	50	76.577	ENSACIG00000005478	rbfox1	56	76.577	Amphilophus_citrinellus
ENSGALG00000034325	RBFOX1	76	71.336	ENSAOCG00000008283	rbfox1	97	77.113	Amphiprion_ocellaris
ENSGALG00000034325	RBFOX1	90	70.000	ENSAPEG00000010636	rbfox1	100	69.634	Amphiprion_percula
ENSGALG00000034325	RBFOX1	76	77.778	ENSATEG00000007513	rbfox1	100	77.460	Anabas_testudineus
ENSGALG00000034325	RBFOX1	94	96.939	ENSAPLG00000013263	RBFOX1	98	96.939	Anas_platyrhynchos
ENSGALG00000034325	RBFOX1	93	87.023	ENSACAG00000004013	RBFOX1	98	87.023	Anolis_carolinensis
ENSGALG00000034325	RBFOX1	97	94.278	ENSANAG00000029527	RBFOX1	98	94.103	Aotus_nancymaae
ENSGALG00000034325	RBFOX1	95	69.330	ENSAMXG00000002431	rbfox1	96	70.361	Astyanax_mexicanus
ENSGALG00000034325	RBFOX1	97	94.536	ENSBTAG00000007210	RBFOX1	98	94.293	Bos_taurus
ENSGALG00000034325	RBFOX1	100	93.301	ENSCJAG00000017351	RBFOX1	100	93.301	Callithrix_jacchus
ENSGALG00000034325	RBFOX1	100	93.780	ENSCAFG00000019082	RBFOX1	100	93.780	Canis_familiaris
ENSGALG00000034325	RBFOX1	100	81.003	ENSCAFG00020024881	RBFOX1	96	81.266	Canis_lupus_dingo
ENSGALG00000034325	RBFOX1	100	92.368	ENSCHIG00000023549	RBFOX1	98	94.837	Capra_hircus
ENSGALG00000034325	RBFOX1	96	94.795	ENSTSYG00000005334	RBFOX1	100	93.830	Carlito_syrichta
ENSGALG00000034325	RBFOX1	100	92.105	ENSCAPG00000017669	RBFOX1	100	92.105	Cavia_aperea
ENSGALG00000034325	RBFOX1	100	92.105	ENSCPOG00000011314	RBFOX1	100	92.105	Cavia_porcellus
ENSGALG00000034325	RBFOX1	100	93.301	ENSCCAG00000023031	RBFOX1	100	93.301	Cebus_capucinus
ENSGALG00000034325	RBFOX1	100	93.301	ENSCATG00000033816	RBFOX1	100	93.301	Cercocebus_atys
ENSGALG00000034325	RBFOX1	100	93.140	ENSCLAG00000012761	RBFOX1	100	92.105	Chinchilla_lanigera
ENSGALG00000034325	RBFOX1	97	95.082	ENSCSAG00000008739	RBFOX1	98	94.837	Chlorocebus_sabaeus
ENSGALG00000034325	RBFOX1	100	72.967	ENSCHOG00000012843	RBFOX1	100	72.967	Choloepus_hoffmanni
ENSGALG00000034325	RBFOX1	100	99.516	ENSCPBG00000026626	RBFOX1	100	99.516	Chrysemys_picta_bellii
ENSGALG00000034325	RBFOX1	100	93.301	ENSCANG00000033125	RBFOX1	100	93.301	Colobus_angolensis_palliatus
ENSGALG00000034325	RBFOX1	100	92.344	ENSCGRG00001013729	Rbfox1	100	92.344	Cricetulus_griseus_chok1gshd
ENSGALG00000034325	RBFOX1	100	92.344	ENSCGRG00000003272	Rbfox1	100	92.344	Cricetulus_griseus_crigri
ENSGALG00000034325	RBFOX1	90	68.844	ENSCSEG00000008840	rbfox1	100	68.844	Cynoglossus_semilaevis
ENSGALG00000034325	RBFOX1	94	79.847	ENSDARG00000014746	rbfox1	100	95.708	Danio_rerio
ENSGALG00000034325	RBFOX1	97	89.630	ENSDNOG00000043612	RBFOX1	94	92.072	Dasypus_novemcinctus
ENSGALG00000034325	RBFOX1	93	89.313	ENSDORG00000010024	Rbfox1	97	89.059	Dipodomys_ordii
ENSGALG00000034325	RBFOX1	100	75.359	ENSETEG00000003771	RBFOX1	100	75.359	Echinops_telfairi
ENSGALG00000034325	RBFOX1	100	92.368	ENSEASG00005011599	RBFOX1	98	94.359	Equus_asinus_asinus
ENSGALG00000034325	RBFOX1	100	92.105	ENSECAG00000012667	RBFOX1	98	94.565	Equus_caballus
ENSGALG00000034325	RBFOX1	81	65.702	ENSELUG00000013096	rbfox1	99	65.289	Esox_lucius
ENSGALG00000034325	RBFOX1	100	92.368	ENSFCAG00000025322	RBFOX1	98	94.837	Felis_catus
ENSGALG00000034325	RBFOX1	85	99.381	ENSFALG00000004027	RBFOX1	100	97.006	Ficedula_albicollis
ENSGALG00000034325	RBFOX1	100	92.584	ENSFDAG00000007388	RBFOX1	100	92.584	Fukomys_damarensis
ENSGALG00000034325	RBFOX1	100	98.417	ENSGAGG00000023681	RBFOX1	100	97.368	Gopherus_agassizii
ENSGALG00000034325	RBFOX1	100	93.301	ENSGGOG00000016871	-	100	93.301	Gorilla_gorilla
ENSGALG00000034325	RBFOX1	100	93.404	ENSHGLG00000016944	RBFOX1	100	92.344	Heterocephalus_glaber_female
ENSGALG00000034325	RBFOX1	100	93.404	ENSHGLG00100003272	RBFOX1	100	92.344	Heterocephalus_glaber_male
ENSGALG00000034325	RBFOX1	93	63.562	ENSHCOG00000016419	rbfox1	96	68.824	Hippocampus_comes
ENSGALG00000034325	RBFOX1	96	88.472	ENSIPUG00000015215	rbfox1	100	88.472	Ictalurus_punctatus
ENSGALG00000034325	RBFOX1	100	92.344	ENSSTOG00000000322	RBFOX1	100	92.344	Ictidomys_tridecemlineatus
ENSGALG00000034325	RBFOX1	100	89.713	ENSJJAG00000002575	Rbfox1	100	89.713	Jaculus_jaculus
ENSGALG00000034325	RBFOX1	93	74.307	ENSLBEG00000014659	rbfox1	98	73.804	Labrus_bergylta
ENSGALG00000034325	RBFOX1	94	86.432	ENSLOCG00000006675	rbfox1	99	86.432	Lepisosteus_oculatus
ENSGALG00000034325	RBFOX1	74	95.130	ENSLAFG00000011480	RBFOX1	100	95.130	Loxodonta_africana
ENSGALG00000034325	RBFOX1	100	93.541	ENSMFAG00000036447	RBFOX1	100	93.541	Macaca_fascicularis
ENSGALG00000034325	RBFOX1	100	93.541	ENSMMUG00000003458	RBFOX1	99	95.355	Macaca_mulatta
ENSGALG00000034325	RBFOX1	100	94.459	ENSMNEG00000032034	RBFOX1	100	93.541	Macaca_nemestrina
ENSGALG00000034325	RBFOX1	100	93.301	ENSMLEG00000015382	RBFOX1	100	93.301	Mandrillus_leucophaeus
ENSGALG00000034325	RBFOX1	90	72.010	ENSMAMG00000003142	rbfox1	97	76.429	Mastacembelus_armatus
ENSGALG00000034325	RBFOX1	75	91.958	ENSMGAG00000008606	RBFOX1	97	91.815	Meleagris_gallopavo
ENSGALG00000034325	RBFOX1	92	54.167	ENSMAUG00000020570	Rbfox1	96	53.368	Mesocricetus_auratus
ENSGALG00000034325	RBFOX1	100	91.579	ENSMICG00000034286	RBFOX1	100	91.063	Microcebus_murinus
ENSGALG00000034325	RBFOX1	100	92.344	ENSMOCG00000020932	Rbfox1	100	92.344	Microtus_ochrogaster
ENSGALG00000034325	RBFOX1	84	70.405	ENSMMOG00000009716	rbfox1	86	71.765	Mola_mola
ENSGALG00000034325	RBFOX1	93	97.175	ENSMODG00000005826	RBFOX1	100	97.175	Monodelphis_domestica
ENSGALG00000034325	RBFOX1	100	70.000	ENSMALG00000003337	rbfox1	98	73.697	Monopterus_albus
ENSGALG00000034325	RBFOX1	100	92.584	MGP_CAROLIEiJ_G0020427	Rbfox1	100	92.584	Mus_caroli
ENSGALG00000034325	RBFOX1	100	92.344	ENSMUSG00000008658	Rbfox1	99	93.939	Mus_musculus
ENSGALG00000034325	RBFOX1	100	92.584	MGP_PahariEiJ_G0016135	Rbfox1	100	92.584	Mus_pahari
ENSGALG00000034325	RBFOX1	100	92.105	MGP_SPRETEiJ_G0021321	Rbfox1	100	92.105	Mus_spretus
ENSGALG00000034325	RBFOX1	100	94.195	ENSMPUG00000014822	RBFOX1	96	94.195	Mustela_putorius_furo
ENSGALG00000034325	RBFOX1	74	92.208	ENSMLUG00000015896	RBFOX1	100	92.208	Myotis_lucifugus
ENSGALG00000034325	RBFOX1	100	93.062	ENSNGAG00000023276	Rbfox1	100	93.062	Nannospalax_galili
ENSGALG00000034325	RBFOX1	96	60.140	ENSNBRG00000011084	rbfox1	98	60.140	Neolamprologus_brichardi
ENSGALG00000034325	RBFOX1	100	93.062	ENSNLEG00000010017	-	100	93.062	Nomascus_leucogenys
ENSGALG00000034325	RBFOX1	100	79.904	ENSMEUG00000012525	RBFOX1	100	79.904	Notamacropus_eugenii
ENSGALG00000034325	RBFOX1	100	75.837	ENSOPRG00000006199	-	100	75.837	Ochotona_princeps
ENSGALG00000034325	RBFOX1	100	91.866	ENSODEG00000013166	RBFOX1	100	91.866	Octodon_degus
ENSGALG00000034325	RBFOX1	97	96.995	ENSOANG00000002379	RBFOX1	98	96.739	Ornithorhynchus_anatinus
ENSGALG00000034325	RBFOX1	58	94.037	ENSOCUG00000001205	-	97	94.037	Oryctolagus_cuniculus
ENSGALG00000034325	RBFOX1	94	91.304	ENSOGAG00000025535	RBFOX1	98	91.304	Otolemur_garnettii
ENSGALG00000034325	RBFOX1	66	81.600	ENSOARG00000005135	RBFOX1	99	81.600	Ovis_aries
ENSGALG00000034325	RBFOX1	97	94.550	ENSPPAG00000036238	-	100	92.896	Pan_paniscus
ENSGALG00000034325	RBFOX1	100	93.541	ENSPPRG00000006546	RBFOX1	100	93.541	Panthera_pardus
ENSGALG00000034325	RBFOX1	97	77.717	ENSPTIG00000021154	RBFOX1	99	80.000	Panthera_tigris_altaica
ENSGALG00000034325	RBFOX1	100	93.301	ENSPTRG00000007744	RBFOX1	100	93.301	Pan_troglodytes
ENSGALG00000034325	RBFOX1	100	93.301	ENSPANG00000026500	RBFOX1	100	93.301	Papio_anubis
ENSGALG00000034325	RBFOX1	89	84.530	ENSPKIG00000019353	rbfox1	100	83.702	Paramormyrops_kingsleyae
ENSGALG00000034325	RBFOX1	97	84.553	ENSPKIG00000009667	-	99	91.908	Paramormyrops_kingsleyae
ENSGALG00000034325	RBFOX1	93	96.667	ENSPSIG00000006523	RBFOX1	97	96.667	Pelodiscus_sinensis
ENSGALG00000034325	RBFOX1	100	92.584	ENSPEMG00000017607	Rbfox1	100	92.584	Peromyscus_maniculatus_bairdii
ENSGALG00000034325	RBFOX1	70	92.884	ENSPCIG00000026887	RBFOX1	100	92.784	Phascolarctos_cinereus
ENSGALG00000034325	RBFOX1	100	94.195	ENSPPYG00000007079	-	96	94.195	Pongo_abelii
ENSGALG00000034325	RBFOX1	90	85.185	ENSPCAG00000002630	RBFOX1	100	85.185	Procavia_capensis
ENSGALG00000034325	RBFOX1	100	92.823	ENSPCOG00000025687	RBFOX1	100	92.823	Propithecus_coquereli
ENSGALG00000034325	RBFOX1	100	88.995	ENSPVAG00000013467	RBFOX1	100	88.995	Pteropus_vampyrus
ENSGALG00000034325	RBFOX1	90	79.597	ENSPNAG00000023109	rbfox1	100	79.597	Pygocentrus_nattereri
ENSGALG00000034325	RBFOX1	100	89.952	ENSRNOG00000002827	Rbfox1	100	89.952	Rattus_norvegicus
ENSGALG00000034325	RBFOX1	97	95.082	ENSRBIG00000044478	RBFOX1	98	94.837	Rhinopithecus_bieti
ENSGALG00000034325	RBFOX1	100	93.301	ENSRROG00000044411	RBFOX1	100	93.301	Rhinopithecus_roxellana
ENSGALG00000034325	RBFOX1	100	93.668	ENSSBOG00000033726	RBFOX1	96	93.668	Saimiri_boliviensis_boliviensis
ENSGALG00000034325	RBFOX1	94	90.026	ENSSHAG00000009257	RBFOX1	100	95.122	Sarcophilus_harrisii
ENSGALG00000034325	RBFOX1	88	70.321	ENSSFOG00015009955	-	87	69.474	Scleropages_formosus
ENSGALG00000034325	RBFOX1	79	88.889	ENSSFOG00015023675	rbfox1	96	88.889	Scleropages_formosus
ENSGALG00000034325	RBFOX1	98	71.005	ENSSMAG00000015505	rbfox1	100	70.776	Scophthalmus_maximus
ENSGALG00000034325	RBFOX1	94	74.242	ENSSDUG00000016413	rbfox1	99	74.046	Seriola_dumerili
ENSGALG00000034325	RBFOX1	82	79.341	ENSSLDG00000009353	rbfox1	98	79.341	Seriola_lalandi_dorsalis
ENSGALG00000034325	RBFOX1	81	85.924	ENSSPUG00000009732	RBFOX1	93	82.934	Sphenodon_punctatus
ENSGALG00000034325	RBFOX1	95	73.632	ENSSPAG00000009723	rbfox1	100	73.956	Stegastes_partitus
ENSGALG00000034325	RBFOX1	100	91.842	ENSSSCG00000007917	RBFOX1	100	94.915	Sus_scrofa
ENSGALG00000034325	RBFOX1	93	96.667	ENSTGUG00000004562	RBFOX1	100	96.667	Taeniopygia_guttata
ENSGALG00000034325	RBFOX1	93	73.892	ENSTRUG00000020940	rbfox1	99	73.645	Takifugu_rubripes
ENSGALG00000034325	RBFOX1	66	54.054	ENSTNIG00000002567	rbfox1	100	55.556	Tetraodon_nigroviridis
ENSGALG00000034325	RBFOX1	81	86.207	ENSTBEG00000009169	-	81	86.207	Tupaia_belangeri
ENSGALG00000034325	RBFOX1	100	93.062	ENSTTRG00000005700	RBFOX1	100	93.062	Tursiops_truncatus
ENSGALG00000034325	RBFOX1	100	88.654	ENSUAMG00000024633	RBFOX1	99	87.949	Ursus_americanus
ENSGALG00000034325	RBFOX1	100	80.739	ENSUMAG00000003579	RBFOX1	97	81.462	Ursus_maritimus
ENSGALG00000034325	RBFOX1	81	94.481	ENSVPAG00000001284	RBFOX1	81	94.481	Vicugna_pacos
ENSGALG00000034325	RBFOX1	97	95.355	ENSVVUG00000017311	RBFOX1	98	95.109	Vulpes_vulpes