EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000034373 (Gene tree)
Gene ID: 415631
Gene Symbol: KATNB1
Alias: -
Full Name: Gallus gallus katanin regulatory subunit B1 (KATNB1)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 17393 bases
Position: chr11:491168-508560
Accession: NM_001030559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000059587	eIF2A	PF08662.11	7.4e-07	1	1
ENSGALP00000057300	eIF2A	PF08662.11	8.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000086373	-	1824	-	ENSGALP00000059587	607 (aa)	-	A0A1L1RLF9
ENSGALT00000073460	-	3226	-	ENSGALP00000057300	657 (aa)	XP_015147779	Q5ZIU8

Gene Model

Click here to download ENSGALG00000034373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000034373's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000034373	KATNB1	100	86.161	ENSCPBG00000026959	KATNB1	100	86.161	Chrysemys_picta_bellii
ENSGALG00000034373	KATNB1	75	41.237	FBgn0040207	kat80	57	38.924	Drosophila_melanogaster
ENSGALG00000034373	KATNB1	100	85.866	ENSFALG00000006902	KATNB1	100	85.866	Ficedula_albicollis
ENSGALG00000034373	KATNB1	100	85.236	ENSGAGG00000020527	KATNB1	100	85.236	Gopherus_agassizii
ENSGALG00000034373	KATNB1	100	84.323	ENSPSIG00000014651	KATNB1	100	84.323	Pelodiscus_sinensis
ENSGALG00000034373	KATNB1	100	83.257	ENSSPUG00000007498	KATNB1	100	83.257	Sphenodon_punctatus
ENSGALG00000034373	KATNB1	100	84.812	ENSTGUG00000004876	KATNB1	100	84.812	Taeniopygia_guttata

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000922	spindle pole	-	ISS	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005813	centrosome	-	IEA	Component
GO:0005819	spindle	-	ISS	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005874	microtubule	-	IEA	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0007019	microtubule depolymerization	21873635.	IBA	Process
GO:0007026	negative regulation of microtubule depolymerization	-	IEA	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0008017	microtubule binding	-	IEA	Function
GO:0008352	katanin complex	21873635.	IBA	Component
GO:0008568	microtubule-severing ATPase activity	21873635.	IBA	Function
GO:0030424	axon	-	IEA	Component
GO:0031117	positive regulation of microtubule depolymerization	-	IEA	Process
GO:0046982	protein heterodimerization activity	-	IEA	Function
GO:0051013	microtubule severing	-	IEA	Process
GO:0051301	cell division	-	IEA	Process
GO:0070840	dynein complex binding	-	IEA	Function