EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000035906 (Gene tree)
Gene ID: 422656
Gene Symbol: YTHDC1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 22349 bases
Position: chr4:51746647-51768995
Accession: 422656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000060750	YTH	PF04146.15	2.7e-41	1	1
ENSGALP00000055285	YTH	PF04146.15	4e-41	1	1
ENSGALP00000051147	YTH	PF04146.15	4.2e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000086952	YTHDC1-202	2770	XM_025149654	ENSGALP00000060750	572 (aa)	XP_025005422	A0A1L1RPM4
ENSGALT00000073501	YTHDC1-203	2745	-	ENSGALP00000051147	752 (aa)	-	A0A1D5PEE5
ENSGALT00000071925	YTHDC1-201	3019	XM_025149650	ENSGALP00000055285	731 (aa)	XP_025005418	A0A1D5PQW4

Gene Model

Click here to download ENSGALG00000035906's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000035906's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000035906	YTHDC1	85	85.994	ENSG00000083896	YTHDC1	82	100.000	Homo_sapiens
ENSGALG00000035906	YTHDC1	55	59.759	ENSAPOG00000013997	ythdc1	91	52.656	Acanthochromis_polyacanthus
ENSGALG00000035906	YTHDC1	56	96.659	ENSAMEG00000005688	YTHDC1	92	85.587	Ailuropoda_melanoleuca
ENSGALG00000035906	YTHDC1	54	63.133	ENSAOCG00000000239	ythdc1	92	55.775	Amphiprion_ocellaris
ENSGALG00000035906	YTHDC1	92	97.543	ENSAPLG00000009921	YTHDC1	99	97.543	Anas_platyrhynchos
ENSGALG00000035906	YTHDC1	88	85.686	ENSACAG00000009697	YTHDC1	92	87.786	Anolis_carolinensis
ENSGALG00000035906	YTHDC1	85	85.290	ENSANAG00000001522	YTHDC1	92	86.289	Aotus_nancymaae
ENSGALG00000035906	YTHDC1	54	61.687	ENSACLG00000019371	ythdc1	92	55.387	Astatotilapia_calliptera
ENSGALG00000035906	YTHDC1	85	66.667	ENSAMXG00000006978	ythdc1	91	67.752	Astyanax_mexicanus
ENSGALG00000035906	YTHDC1	85	84.211	ENSBTAG00000015572	YTHDC1	92	84.501	Bos_taurus
ENSGALG00000035906	YTHDC1	85	83.459	ENSCJAG00000009934	YTHDC1	92	85.991	Callithrix_jacchus
ENSGALG00000035906	YTHDC1	56	96.659	ENSCAFG00000002821	YTHDC1	92	85.587	Canis_familiaris
ENSGALG00000035906	YTHDC1	56	96.659	ENSCAFG00020027112	YTHDC1	92	85.587	Canis_lupus_dingo
ENSGALG00000035906	YTHDC1	90	81.426	ENSCHIG00000004810	YTHDC1	98	83.022	Capra_hircus
ENSGALG00000035906	YTHDC1	85	86.295	ENSTSYG00000011668	YTHDC1	92	85.970	Carlito_syrichta
ENSGALG00000035906	YTHDC1	89	61.610	ENSCAPG00000008722	YTHDC1	90	58.195	Cavia_aperea
ENSGALG00000035906	YTHDC1	88	79.810	ENSCPOG00000010929	YTHDC1	91	78.806	Cavia_porcellus
ENSGALG00000035906	YTHDC1	85	86.425	ENSCCAG00000035754	YTHDC1	92	86.425	Cebus_capucinus
ENSGALG00000035906	YTHDC1	90	84.701	ENSCATG00000036320	YTHDC1	99	84.515	Cercocebus_atys
ENSGALG00000035906	YTHDC1	88	83.588	ENSCLAG00000005482	YTHDC1	92	86.202	Chinchilla_lanigera
ENSGALG00000035906	YTHDC1	85	83.158	ENSCSAG00000005252	YTHDC1	92	85.693	Chlorocebus_sabaeus
ENSGALG00000035906	YTHDC1	88	93.625	ENSCPBG00000021965	YTHDC1	94	93.920	Chrysemys_picta_bellii
ENSGALG00000035906	YTHDC1	90	84.701	ENSCANG00000004769	YTHDC1	99	84.515	Colobus_angolensis_palliatus
ENSGALG00000035906	YTHDC1	85	85.604	ENSCGRG00001000816	Ythdc1	92	85.736	Cricetulus_griseus_chok1gshd
ENSGALG00000035906	YTHDC1	85	85.843	ENSCGRG00000009807	Ythdc1	92	86.446	Cricetulus_griseus_crigri
ENSGALG00000035906	YTHDC1	84	54.617	ENSCSEG00000020404	ythdc1	92	56.231	Cynoglossus_semilaevis
ENSGALG00000035906	YTHDC1	54	60.698	ENSCVAG00000022349	ythdc1	92	54.079	Cyprinodon_variegatus
ENSGALG00000035906	YTHDC1	85	65.474	ENSDARG00000051953	ythdc1	91	65.211	Danio_rerio
ENSGALG00000035906	YTHDC1	88	83.846	ENSDNOG00000004949	YTHDC1	92	86.466	Dasypus_novemcinctus
ENSGALG00000035906	YTHDC1	85	86.244	ENSDORG00000013045	Ythdc1	92	86.767	Dipodomys_ordii
ENSGALG00000035906	YTHDC1	67	97.183	ENSETEG00000001878	YTHDC1	69	97.468	Echinops_telfairi
ENSGALG00000035906	YTHDC1	80	86.262	ENSEASG00005018383	YTHDC1	92	86.262	Equus_asinus_asinus
ENSGALG00000035906	YTHDC1	80	84.665	ENSECAG00000018303	YTHDC1	99	82.397	Equus_caballus
ENSGALG00000035906	YTHDC1	56	95.227	ENSEEUG00000015466	YTHDC1	92	84.054	Erinaceus_europaeus
ENSGALG00000035906	YTHDC1	85	63.418	ENSELUG00000014029	ythdc1	93	64.163	Esox_lucius
ENSGALG00000035906	YTHDC1	56	96.659	ENSFCAG00000026791	YTHDC1	92	85.417	Felis_catus
ENSGALG00000035906	YTHDC1	65	94.737	ENSFALG00000006581	YTHDC1	97	93.392	Ficedula_albicollis
ENSGALG00000035906	YTHDC1	85	86.405	ENSFDAG00000018560	YTHDC1	92	86.254	Fukomys_damarensis
ENSGALG00000035906	YTHDC1	63	55.932	ENSFHEG00000001286	ythdc1	62	55.357	Fundulus_heteroclitus
ENSGALG00000035906	YTHDC1	53	77.833	ENSGMOG00000018815	ythdc1	75	77.833	Gadus_morhua
ENSGALG00000035906	YTHDC1	55	63.318	ENSGACG00000015486	ythdc1	57	64.619	Gasterosteus_aculeatus
ENSGALG00000035906	YTHDC1	88	94.235	ENSGAGG00000007108	YTHDC1	92	94.427	Gopherus_agassizii
ENSGALG00000035906	YTHDC1	91	84.544	ENSGGOG00000021958	YTHDC1	99	84.358	Gorilla_gorilla
ENSGALG00000035906	YTHDC1	54	61.687	ENSHBUG00000019288	ythdc1	92	55.387	Haplochromis_burtoni
ENSGALG00000035906	YTHDC1	88	83.493	ENSHGLG00000006319	-	92	85.802	Heterocephalus_glaber_female
ENSGALG00000035906	YTHDC1	87	68.693	ENSHGLG00000003239	-	85	68.643	Heterocephalus_glaber_female
ENSGALG00000035906	YTHDC1	87	67.171	ENSHGLG00100008060	-	86	67.081	Heterocephalus_glaber_male
ENSGALG00000035906	YTHDC1	85	85.542	ENSHGLG00100001556	-	92	85.075	Heterocephalus_glaber_male
ENSGALG00000035906	YTHDC1	51	70.270	ENSHCOG00000001520	ythdc1	82	70.270	Hippocampus_comes
ENSGALG00000035906	YTHDC1	88	65.497	ENSIPUG00000018136	ythdc1	91	68.223	Ictalurus_punctatus
ENSGALG00000035906	YTHDC1	56	94.614	ENSSTOG00000013652	YTHDC1	92	84.831	Ictidomys_tridecemlineatus
ENSGALG00000035906	YTHDC1	55	95.761	ENSJJAG00000010268	Ythdc1	92	85.938	Jaculus_jaculus
ENSGALG00000035906	YTHDC1	55	60.849	ENSKMAG00000006483	ythdc1	85	65.753	Kryptolebias_marmoratus
ENSGALG00000035906	YTHDC1	60	63.971	ENSLBEG00000020831	ythdc1	73	65.122	Labrus_bergylta
ENSGALG00000035906	YTHDC1	81	73.144	ENSLACG00000004893	YTHDC1	92	74.092	Latimeria_chalumnae
ENSGALG00000035906	YTHDC1	85	73.002	ENSLOCG00000003045	ythdc1	91	72.826	Lepisosteus_oculatus
ENSGALG00000035906	YTHDC1	88	84.423	ENSLAFG00000021592	YTHDC1	98	82.322	Loxodonta_africana
ENSGALG00000035906	YTHDC1	90	84.701	ENSMFAG00000031927	YTHDC1	99	84.515	Macaca_fascicularis
ENSGALG00000035906	YTHDC1	85	83.308	ENSMMUG00000002265	YTHDC1	97	81.818	Macaca_mulatta
ENSGALG00000035906	YTHDC1	90	84.515	ENSMNEG00000033751	YTHDC1	99	84.328	Macaca_nemestrina
ENSGALG00000035906	YTHDC1	90	84.701	ENSMLEG00000042147	YTHDC1	99	84.515	Mandrillus_leucophaeus
ENSGALG00000035906	YTHDC1	54	62.830	ENSMAMG00000013122	ythdc1	91	54.423	Mastacembelus_armatus
ENSGALG00000035906	YTHDC1	54	61.687	ENSMZEG00005023173	ythdc1	92	55.387	Maylandia_zebra
ENSGALG00000035906	YTHDC1	93	98.281	ENSMGAG00000010391	YTHDC1	99	98.281	Meleagris_gallopavo
ENSGALG00000035906	YTHDC1	85	85.604	ENSMAUG00000001286	Ythdc1	92	85.583	Mesocricetus_auratus
ENSGALG00000035906	YTHDC1	85	86.858	ENSMICG00000034640	YTHDC1	92	85.355	Microcebus_murinus
ENSGALG00000035906	YTHDC1	88	83.716	ENSMOCG00000020201	Ythdc1	92	86.133	Microtus_ochrogaster
ENSGALG00000035906	YTHDC1	89	57.934	ENSMODG00000014337	-	93	69.797	Monodelphis_domestica
ENSGALG00000035906	YTHDC1	62	57.759	ENSMODG00000009173	-	84	61.578	Monodelphis_domestica
ENSGALG00000035906	YTHDC1	88	50.935	ENSMODG00000010076	-	95	50.000	Monodelphis_domestica
ENSGALG00000035906	YTHDC1	88	85.404	ENSMODG00000020754	-	92	88.650	Monodelphis_domestica
ENSGALG00000035906	YTHDC1	90	82.070	MGP_CAROLIEiJ_G0027347	Ythdc1	96	82.994	Mus_caroli
ENSGALG00000035906	YTHDC1	85	86.015	ENSMUSG00000035851	Ythdc1	92	85.097	Mus_musculus
ENSGALG00000035906	YTHDC1	85	85.865	MGP_PahariEiJ_G0017126	Ythdc1	92	84.799	Mus_pahari
ENSGALG00000035906	YTHDC1	85	86.165	MGP_SPRETEiJ_G0028339	Ythdc1	92	85.246	Mus_spretus
ENSGALG00000035906	YTHDC1	85	68.852	ENSMPUG00000001743	YTHDC1	53	96.867	Mustela_putorius_furo
ENSGALG00000035906	YTHDC1	88	83.525	ENSMLUG00000016300	YTHDC1	92	86.233	Myotis_lucifugus
ENSGALG00000035906	YTHDC1	73	75.455	ENSNGAG00000024000	Ythdc1	93	78.487	Nannospalax_galili
ENSGALG00000035906	YTHDC1	56	60.185	ENSNBRG00000007663	ythdc1	70	66.511	Neolamprologus_brichardi
ENSGALG00000035906	YTHDC1	90	83.925	ENSNLEG00000009202	YTHDC1	99	83.738	Nomascus_leucogenys
ENSGALG00000035906	YTHDC1	65	80.936	ENSMEUG00000007128	YTHDC1	68	80.936	Notamacropus_eugenii
ENSGALG00000035906	YTHDC1	73	96.884	ENSOPRG00000008986	YTHDC1	74	96.884	Ochotona_princeps
ENSGALG00000035906	YTHDC1	88	83.685	ENSODEG00000001715	YTHDC1	92	85.736	Octodon_degus
ENSGALG00000035906	YTHDC1	85	76.471	ENSONIG00000012651	ythdc1	90	67.500	Oreochromis_niloticus
ENSGALG00000035906	YTHDC1	81	77.054	ENSOANG00000014398	YTHDC1	55	95.190	Ornithorhynchus_anatinus
ENSGALG00000035906	YTHDC1	86	77.143	ENSOCUG00000015886	YTHDC1	56	94.924	Oryctolagus_cuniculus
ENSGALG00000035906	YTHDC1	54	61.893	ENSORLG00000030544	ythdc1	93	56.781	Oryzias_latipes
ENSGALG00000035906	YTHDC1	55	60.714	ENSORLG00020019316	ythdc1	93	56.116	Oryzias_latipes_hni
ENSGALG00000035906	YTHDC1	85	52.255	ENSOMEG00000000551	ythdc1	93	56.124	Oryzias_melastigma
ENSGALG00000035906	YTHDC1	85	85.693	ENSOGAG00000003362	YTHDC1	92	85.373	Otolemur_garnettii
ENSGALG00000035906	YTHDC1	85	84.211	ENSOARG00000008633	YTHDC1	92	84.501	Ovis_aries
ENSGALG00000035906	YTHDC1	91	84.888	ENSPPAG00000041315	YTHDC1	99	84.701	Pan_paniscus
ENSGALG00000035906	YTHDC1	55	96.758	ENSPPRG00000011979	YTHDC1	92	85.168	Panthera_pardus
ENSGALG00000035906	YTHDC1	85	84.421	ENSPTIG00000015527	YTHDC1	93	84.570	Panthera_tigris_altaica
ENSGALG00000035906	YTHDC1	91	84.888	ENSPTRG00000016105	YTHDC1	99	84.701	Pan_troglodytes
ENSGALG00000035906	YTHDC1	90	84.701	ENSPANG00000021590	YTHDC1	98	84.515	Papio_anubis
ENSGALG00000035906	YTHDC1	88	67.954	ENSPKIG00000018497	ythdc1	91	70.420	Paramormyrops_kingsleyae
ENSGALG00000035906	YTHDC1	88	94.422	ENSPSIG00000002782	YTHDC1	92	95.008	Pelodiscus_sinensis
ENSGALG00000035906	YTHDC1	52	57.273	ENSPMGG00000000970	-	80	72.619	Periophthalmus_magnuspinnatus
ENSGALG00000035906	YTHDC1	85	85.994	ENSPEMG00000013850	Ythdc1	92	86.295	Peromyscus_maniculatus_bairdii
ENSGALG00000035906	YTHDC1	88	85.207	ENSPCIG00000006870	YTHDC1	92	88.497	Phascolarctos_cinereus
ENSGALG00000035906	YTHDC1	55	59.864	ENSPFOG00000013404	ythdc1	92	55.215	Poecilia_formosa
ENSGALG00000035906	YTHDC1	54	61.283	ENSPLAG00000011079	ythdc1	85	65.625	Poecilia_latipinna
ENSGALG00000035906	YTHDC1	55	59.864	ENSPMEG00000009238	ythdc1	92	55.352	Poecilia_mexicana
ENSGALG00000035906	YTHDC1	54	61.307	ENSPREG00000016973	ythdc1	91	51.415	Poecilia_reticulata
ENSGALG00000035906	YTHDC1	74	87.543	ENSPPYG00000014726	YTHDC1	91	87.543	Pongo_abelii
ENSGALG00000035906	YTHDC1	70	96.429	ENSPCAG00000009607	YTHDC1	76	86.818	Procavia_capensis
ENSGALG00000035906	YTHDC1	85	81.832	ENSPCOG00000019105	YTHDC1	92	81.003	Propithecus_coquereli
ENSGALG00000035906	YTHDC1	56	93.317	ENSPVAG00000015551	YTHDC1	92	83.383	Pteropus_vampyrus
ENSGALG00000035906	YTHDC1	54	61.687	ENSPNYG00000011687	ythdc1	92	55.387	Pundamilia_nyererei
ENSGALG00000035906	YTHDC1	88	67.375	ENSPNAG00000028365	ythdc1	91	70.571	Pygocentrus_nattereri
ENSGALG00000035906	YTHDC1	56	94.614	ENSRNOG00000001996	Ythdc1	92	84.141	Rattus_norvegicus
ENSGALG00000035906	YTHDC1	90	83.396	ENSRBIG00000028279	YTHDC1	99	83.209	Rhinopithecus_bieti
ENSGALG00000035906	YTHDC1	90	84.701	ENSRROG00000035028	YTHDC1	99	84.515	Rhinopithecus_roxellana
ENSGALG00000035906	YTHDC1	90	84.888	ENSSBOG00000022353	YTHDC1	99	84.701	Saimiri_boliviensis_boliviensis
ENSGALG00000035906	YTHDC1	88	85.010	ENSSHAG00000002538	YTHDC1	91	89.420	Sarcophilus_harrisii
ENSGALG00000035906	YTHDC1	88	68.566	ENSSFOG00015003298	ythdc1	91	70.928	Scleropages_formosus
ENSGALG00000035906	YTHDC1	55	60.948	ENSSMAG00000009086	ythdc1	92	54.882	Scophthalmus_maximus
ENSGALG00000035906	YTHDC1	54	62.228	ENSSDUG00000022008	ythdc1	92	56.024	Seriola_dumerili
ENSGALG00000035906	YTHDC1	54	62.228	ENSSLDG00000007926	ythdc1	92	56.024	Seriola_lalandi_dorsalis
ENSGALG00000035906	YTHDC1	56	96.181	ENSSARG00000010960	YTHDC1	91	86.807	Sorex_araneus
ENSGALG00000035906	YTHDC1	88	87.723	ENSSPUG00000009357	YTHDC1	93	91.186	Sphenodon_punctatus
ENSGALG00000035906	YTHDC1	54	63.373	ENSSPAG00000011449	ythdc1	92	56.140	Stegastes_partitus
ENSGALG00000035906	YTHDC1	56	96.181	ENSSSCG00000035505	YTHDC1	91	85.224	Sus_scrofa
ENSGALG00000035906	YTHDC1	92	97.110	ENSTGUG00000004452	-	98	97.110	Taeniopygia_guttata
ENSGALG00000035906	YTHDC1	60	71.795	ENSTRUG00000010142	ythdc1	91	48.392	Takifugu_rubripes
ENSGALG00000035906	YTHDC1	59	61.991	ENSTNIG00000013243	ythdc1	61	65.814	Tetraodon_nigroviridis
ENSGALG00000035906	YTHDC1	85	80.031	ENSTBEG00000011546	YTHDC1	91	81.413	Tupaia_belangeri
ENSGALG00000035906	YTHDC1	56	95.704	ENSTTRG00000005083	YTHDC1	92	84.398	Tursiops_truncatus
ENSGALG00000035906	YTHDC1	80	85.760	ENSUAMG00000010388	YTHDC1	92	85.920	Ursus_americanus
ENSGALG00000035906	YTHDC1	92	80.288	ENSUMAG00000013668	YTHDC1	98	80.288	Ursus_maritimus
ENSGALG00000035906	YTHDC1	85	85.248	ENSVPAG00000009040	YTHDC1	92	84.769	Vicugna_pacos
ENSGALG00000035906	YTHDC1	80	84.824	ENSVVUG00000005387	YTHDC1	92	85.942	Vulpes_vulpes
ENSGALG00000035906	YTHDC1	85	77.554	ENSXETG00000017960	ythdc1	91	77.623	Xenopus_tropicalis
ENSGALG00000035906	YTHDC1	62	55.556	ENSXCOG00000000530	ythdc1	72	55.785	Xiphophorus_couchianus
ENSGALG00000035906	YTHDC1	55	59.637	ENSXMAG00000005196	ythdc1	92	54.504	Xiphophorus_maculatus