EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000037629 (Gene tree)
Gene ID: -
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 39379 bases
Position: chr2:45896594-45935972
Accession: 29011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000052946	UvrD-helicase	PF00580.21	1.5e-07	1	1
ENSGALP00000072059	UvrD-helicase	PF00580.21	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000095134	TRANK1-201	6642	-	ENSGALP00000072059	2213 (aa)	-	-
ENSGALT00000054541	TRANK1-202	5706	-	ENSGALP00000052946	1901 (aa)	-	A0A1D5PJF3

Gene Model

Click here to download ENSGALG00000037629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000037629's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000037629	TRANK1	76	86.301	ENSAPLG00000010356	TRANK1	69	86.301	Anas_platyrhynchos
ENSGALG00000037629	TRANK1	85	59.818	ENSCAFG00020001387	TRANK1	99	60.304	Canis_lupus_dingo
ENSGALG00000037629	TRANK1	98	61.049	ENSTSYG00000025860	TRANK1	73	61.251	Carlito_syrichta
ENSGALG00000037629	TRANK1	97	60.224	ENSCLAG00000003643	TRANK1	71	60.313	Chinchilla_lanigera
ENSGALG00000037629	TRANK1	100	69.720	ENSCPBG00000013529	TRANK1	74	70.105	Chrysemys_picta_bellii
ENSGALG00000037629	TRANK1	97	61.793	ENSCANG00000039915	TRANK1	73	62.034	Colobus_angolensis_palliatus
ENSGALG00000037629	TRANK1	100	60.405	ENSDNOG00000003573	TRANK1	73	60.555	Dasypus_novemcinctus
ENSGALG00000037629	TRANK1	100	61.108	ENSEASG00005007374	TRANK1	99	59.647	Equus_asinus_asinus
ENSGALG00000037629	TRANK1	100	61.108	ENSECAG00000018264	TRANK1	74	61.522	Equus_caballus
ENSGALG00000037629	TRANK1	74	62.194	ENSEEUG00000008528	TRANK1	68	62.562	Erinaceus_europaeus
ENSGALG00000037629	TRANK1	100	80.189	ENSFALG00000002875	TRANK1	74	79.915	Ficedula_albicollis
ENSGALG00000037629	TRANK1	85	71.322	ENSGAGG00000009012	TRANK1	71	71.322	Gopherus_agassizii
ENSGALG00000037629	TRANK1	100	53.306	ENSLOCG00000004808	TRANK1	72	53.435	Lepisosteus_oculatus
ENSGALG00000037629	TRANK1	98	95.697	ENSMGAG00000011934	TRANK1	73	95.636	Meleagris_gallopavo
ENSGALG00000037629	TRANK1	98	61.200	ENSMLUG00000003537	TRANK1	73	61.171	Myotis_lucifugus
ENSGALG00000037629	TRANK1	97	60.182	ENSODEG00000003882	TRANK1	70	60.336	Octodon_degus
ENSGALG00000037629	TRANK1	100	67.687	ENSPSIG00000010217	TRANK1	74	67.718	Pelodiscus_sinensis
ENSGALG00000037629	TRANK1	64	60.699	ENSPCAG00000002172	-	64	60.851	Procavia_capensis
ENSGALG00000037629	TRANK1	70	60.777	ENSPVAG00000004199	TRANK1	66	60.883	Pteropus_vampyrus
ENSGALG00000037629	TRANK1	100	61.655	ENSRBIG00000012281	TRANK1	73	62.088	Rhinopithecus_bieti
ENSGALG00000037629	TRANK1	97	61.900	ENSRROG00000044487	TRANK1	73	62.142	Rhinopithecus_roxellana
ENSGALG00000037629	TRANK1	61	62.679	ENSSARG00000007861	-	56	62.867	Sorex_araneus
ENSGALG00000037629	TRANK1	61	76.355	ENSSPUG00000015974	TRANK1	87	76.251	Sphenodon_punctatus
ENSGALG00000037629	TRANK1	75	83.778	ENSTGUG00000005694	TRANK1	68	83.778	Taeniopygia_guttata
ENSGALG00000037629	TRANK1	85	59.783	ENSUAMG00000027609	-	99	60.341	Ursus_americanus
ENSGALG00000037629	TRANK1	85	60.158	ENSUMAG00000006416	TRANK1	99	60.723	Ursus_maritimus
ENSGALG00000037629	TRANK1	85	59.322	ENSVVUG00000007788	TRANK1	99	59.648	Vulpes_vulpes