EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000037946 (Gene tree)
Gene ID: 100859276
Gene Symbol: -
Alias: LARK|RBM4A|ZCCHC21|ZCRB3A
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 4202 bases
Position: chr33:6353086-6357287
Accession: 100859276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000045007	zf-CCHC	PF00098.23	2e-07	1	1
ENSGALP00000068434	zf-CCHC	PF00098.23	2e-07	1	1
ENSGALP00000045007	RRM_5	PF13893.6	1.2e-08	1	2
ENSGALP00000045007	RRM_5	PF13893.6	1.2e-08	2	2
ENSGALP00000068434	RRM_5	PF13893.6	1.2e-08	1	2
ENSGALP00000068434	RRM_5	PF13893.6	1.2e-08	2	2
ENSGALP00000045007	RRM_1	PF00076.22	2.4e-33	1	2
ENSGALP00000045007	RRM_1	PF00076.22	2.4e-33	2	2
ENSGALP00000068434	RRM_1	PF00076.22	2.4e-33	1	2
ENSGALP00000068434	RRM_1	PF00076.22	2.4e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000095444	-	2217	-	ENSGALP00000068434	368 (aa)	XP_015128487	UPI000739AAC7
ENSGALT00000080697	-	1738	-	ENSGALP00000045007	368 (aa)	XP_015128487	A0A1D5NXB3

Gene Model

Click here to download ENSGALG00000037946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000037946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000037946	-	100	76.000	ENSG00000173933	RBM4	97	97.101	Homo_sapiens
ENSGALG00000037946	-	99	52.926	ENSG00000248643	RBM14-RBM4	100	53.316	Homo_sapiens
ENSGALG00000037946	-	100	77.273	ENSG00000173914	RBM4B	97	97.122	Homo_sapiens
ENSGALG00000037946	-	100	77.807	ENSAMEG00000010906	RBM4B	100	78.133	Ailuropoda_melanoleuca
ENSGALG00000037946	-	100	75.000	ENSAMEG00000010914	RBM4	100	76.923	Ailuropoda_melanoleuca
ENSGALG00000037946	-	100	77.005	ENSANAG00000023478	RBM4B	97	97.122	Aotus_nancymaae
ENSGALG00000037946	-	100	76.471	ENSBTAG00000031688	RBM4	100	77.867	Bos_taurus
ENSGALG00000037946	-	100	77.273	ENSBTAG00000000423	RBM4B	100	77.333	Bos_taurus
ENSGALG00000037946	-	100	77.005	ENSCJAG00000013666	RBM4B	97	97.122	Callithrix_jacchus
ENSGALG00000037946	-	100	78.049	ENSCAFG00000012378	RBM4B	100	77.867	Canis_familiaris
ENSGALG00000037946	-	100	75.000	ENSCAFG00000012388	RBM4	100	76.923	Canis_familiaris
ENSGALG00000037946	-	100	75.000	ENSCAFG00020015515	RBM4	100	76.923	Canis_lupus_dingo
ENSGALG00000037946	-	100	78.049	ENSCAFG00020015519	RBM4B	100	77.867	Canis_lupus_dingo
ENSGALG00000037946	-	100	76.471	ENSCHIG00000020613	RBM4	100	77.867	Capra_hircus
ENSGALG00000037946	-	100	77.540	ENSCHIG00000008907	RBM4B	100	77.600	Capra_hircus
ENSGALG00000037946	-	66	64.400	ENSTSYG00000009580	RBM4B	96	64.940	Carlito_syrichta
ENSGALG00000037946	-	100	77.540	ENSCAPG00000009570	RBM4B	100	77.867	Cavia_aperea
ENSGALG00000037946	-	100	74.734	ENSCAPG00000016600	RBM4	97	97.826	Cavia_aperea
ENSGALG00000037946	-	100	74.734	ENSCPOG00000013194	RBM4	97	97.826	Cavia_porcellus
ENSGALG00000037946	-	100	77.540	ENSCPOG00000013689	RBM4B	100	77.867	Cavia_porcellus
ENSGALG00000037946	-	54	69.154	ENSCCAG00000023319	-	100	69.154	Cebus_capucinus
ENSGALG00000037946	-	100	77.273	ENSCCAG00000016501	RBM4B	97	97.122	Cebus_capucinus
ENSGALG00000037946	-	100	77.273	ENSCATG00000035353	RBM4B	97	97.122	Cercocebus_atys
ENSGALG00000037946	-	100	77.005	ENSCLAG00000015287	RBM4B	100	77.333	Chinchilla_lanigera
ENSGALG00000037946	-	100	74.468	ENSCLAG00000014756	RBM4	97	97.826	Chinchilla_lanigera
ENSGALG00000037946	-	100	77.273	ENSCSAG00000008361	RBM4B	100	77.600	Chlorocebus_sabaeus
ENSGALG00000037946	-	100	77.273	ENSCHOG00000002892	RBM4B	100	77.333	Choloepus_hoffmanni
ENSGALG00000037946	-	63	62.185	ENSCHOG00000009753	RBM14-RBM4	100	65.272	Choloepus_hoffmanni
ENSGALG00000037946	-	100	92.246	ENSCPBG00000023800	-	100	92.246	Chrysemys_picta_bellii
ENSGALG00000037946	-	100	77.273	ENSCANG00000021868	RBM4B	97	97.122	Colobus_angolensis_palliatus
ENSGALG00000037946	-	100	73.797	ENSCGRG00001024693	Rbm4b	100	74.933	Cricetulus_griseus_chok1gshd
ENSGALG00000037946	-	100	74.332	ENSCGRG00001016609	-	97	97.826	Cricetulus_griseus_chok1gshd
ENSGALG00000037946	-	100	73.797	ENSCGRG00000012112	Rbm4b	100	74.933	Cricetulus_griseus_crigri
ENSGALG00000037946	-	100	74.332	ENSCGRG00000010183	-	97	97.826	Cricetulus_griseus_crigri
ENSGALG00000037946	-	100	74.468	ENSDNOG00000032390	RBM4	100	76.393	Dasypus_novemcinctus
ENSGALG00000037946	-	100	76.738	ENSDNOG00000019500	-	100	76.533	Dasypus_novemcinctus
ENSGALG00000037946	-	100	75.936	ENSDNOG00000045639	-	100	75.733	Dasypus_novemcinctus
ENSGALG00000037946	-	100	76.423	ENSDORG00000029108	Rbm4b	100	76.533	Dipodomys_ordii
ENSGALG00000037946	-	100	74.599	ENSDORG00000004538	-	97	96.377	Dipodomys_ordii
ENSGALG00000037946	-	63	52.586	ENSETEG00000018142	-	100	54.113	Echinops_telfairi
ENSGALG00000037946	-	100	75.401	ENSEASG00005005064	RBM4	100	76.800	Equus_asinus_asinus
ENSGALG00000037946	-	100	78.075	ENSEASG00005005068	RBM4B	100	78.400	Equus_asinus_asinus
ENSGALG00000037946	-	100	77.807	ENSECAG00000022987	RBM4B	100	78.133	Equus_caballus
ENSGALG00000037946	-	100	75.401	ENSECAG00000022940	RBM4	100	76.800	Equus_caballus
ENSGALG00000037946	-	100	75.532	ENSEEUG00000000058	RBM4B	100	76.127	Erinaceus_europaeus
ENSGALG00000037946	-	100	77.807	ENSFCAG00000007394	RBM4B	97	97.122	Felis_catus
ENSGALG00000037946	-	100	75.000	ENSFCAG00000029651	RBM4	97	97.101	Felis_catus
ENSGALG00000037946	-	100	82.880	ENSFALG00000002073	-	100	82.880	Ficedula_albicollis
ENSGALG00000037946	-	100	74.734	ENSFDAG00000005447	RBM4	97	97.826	Fukomys_damarensis
ENSGALG00000037946	-	100	77.273	ENSFDAG00000015530	RBM4B	100	77.600	Fukomys_damarensis
ENSGALG00000037946	-	100	91.979	ENSGAGG00000008553	-	100	91.979	Gopherus_agassizii
ENSGALG00000037946	-	100	77.273	ENSGGOG00000011698	RBM4B	97	97.122	Gorilla_gorilla
ENSGALG00000037946	-	100	74.468	ENSHGLG00000009991	RBM4	97	97.826	Heterocephalus_glaber_female
ENSGALG00000037946	-	100	77.540	ENSHGLG00000016412	-	100	77.867	Heterocephalus_glaber_female
ENSGALG00000037946	-	100	64.973	ENSHGLG00000002853	-	100	65.600	Heterocephalus_glaber_female
ENSGALG00000037946	-	79	46.221	ENSHGLG00000000117	-	95	56.684	Heterocephalus_glaber_female
ENSGALG00000037946	-	100	67.751	ENSHGLG00100003854	RBM4	97	97.826	Heterocephalus_glaber_male
ENSGALG00000037946	-	95	65.826	ENSHGLG00100020033	-	99	66.480	Heterocephalus_glaber_male
ENSGALG00000037946	-	100	76.203	ENSHGLG00100003978	-	100	77.067	Heterocephalus_glaber_male
ENSGALG00000037946	-	100	74.734	ENSSTOG00000022811	RBM4	97	97.101	Ictidomys_tridecemlineatus
ENSGALG00000037946	-	100	77.005	ENSSTOG00000011226	RBM4B	100	77.600	Ictidomys_tridecemlineatus
ENSGALG00000037946	-	100	72.460	ENSJJAG00000020870	Rbm4b	100	74.667	Jaculus_jaculus
ENSGALG00000037946	-	100	75.538	ENSLAFG00000028147	-	100	76.393	Loxodonta_africana
ENSGALG00000037946	-	100	74.866	ENSLAFG00000002285	RBM4B	100	75.467	Loxodonta_africana
ENSGALG00000037946	-	100	77.273	ENSMFAG00000033927	RBM4B	97	97.826	Macaca_fascicularis
ENSGALG00000037946	-	100	77.273	ENSMNEG00000043371	RBM4B	97	97.122	Macaca_nemestrina
ENSGALG00000037946	-	100	77.273	ENSMLEG00000028563	RBM4B	97	97.826	Mandrillus_leucophaeus
ENSGALG00000037946	-	100	74.599	ENSMAUG00000017027	Rbm4b	100	75.467	Mesocricetus_auratus
ENSGALG00000037946	-	100	76.738	ENSMICG00000003820	RBM4B	97	97.122	Microcebus_murinus
ENSGALG00000037946	-	100	74.332	ENSMOCG00000001835	Rbm4b	100	75.467	Microtus_ochrogaster
ENSGALG00000037946	-	100	73.529	ENSMODG00000008056	-	100	74.670	Monodelphis_domestica
ENSGALG00000037946	-	100	74.255	MGP_CAROLIEiJ_G0022516	-	97	97.826	Mus_caroli
ENSGALG00000037946	-	100	75.401	MGP_CAROLIEiJ_G0022515	Rbm4b	100	76.533	Mus_caroli
ENSGALG00000037946	-	99	50.541	MGP_CAROLIEiJ_G0022514	-	100	52.394	Mus_caroli
ENSGALG00000037946	-	100	73.984	ENSMUSG00000094936	Rbm4	100	97.093	Mus_musculus
ENSGALG00000037946	-	100	75.134	ENSMUSG00000033760	Rbm4b	91	97.122	Mus_musculus
ENSGALG00000037946	-	100	73.984	ENSMUSG00000096370	Gm21992	100	75.467	Mus_musculus
ENSGALG00000037946	-	100	74.526	MGP_PahariEiJ_G0014013	-	97	97.826	Mus_pahari
ENSGALG00000037946	-	100	74.526	MGP_PahariEiJ_G0014011	-	100	76.000	Mus_pahari
ENSGALG00000037946	-	100	75.134	MGP_PahariEiJ_G0014012	Rbm4b	100	76.267	Mus_pahari
ENSGALG00000037946	-	100	55.287	MGP_SPRETEiJ_G0023430	-	100	57.270	Mus_spretus
ENSGALG00000037946	-	100	62.290	MGP_SPRETEiJ_G0023429	-	100	63.758	Mus_spretus
ENSGALG00000037946	-	100	55.287	MGP_SPRETEiJ_G0023428	-	100	52.128	Mus_spretus
ENSGALG00000037946	-	100	77.540	ENSMPUG00000003450	RBM4B	100	77.600	Mustela_putorius_furo
ENSGALG00000037946	-	100	74.734	ENSMPUG00000003443	RBM4	100	76.658	Mustela_putorius_furo
ENSGALG00000037946	-	99	74.263	ENSMLUG00000004076	RBM4	95	75.936	Myotis_lucifugus
ENSGALG00000037946	-	100	75.401	ENSMLUG00000001290	RBM4B	100	76.267	Myotis_lucifugus
ENSGALG00000037946	-	100	75.401	ENSNGAG00000016292	Rbm4b	100	76.267	Nannospalax_galili
ENSGALG00000037946	-	100	77.273	ENSNLEG00000006213	RBM4B	97	97.122	Nomascus_leucogenys
ENSGALG00000037946	-	100	76.000	ENSNLEG00000035021	RBM4	98	97.101	Nomascus_leucogenys
ENSGALG00000037946	-	63	61.345	ENSMEUG00000005739	-	100	63.598	Notamacropus_eugenii
ENSGALG00000037946	-	100	74.933	ENSMEUG00000001445	-	100	76.064	Notamacropus_eugenii
ENSGALG00000037946	-	100	75.798	ENSOPRG00000009149	RBM4	100	77.454	Ochotona_princeps
ENSGALG00000037946	-	100	77.273	ENSOPRG00000009158	RBM4B	100	77.600	Ochotona_princeps
ENSGALG00000037946	-	100	63.957	ENSODEG00000001866	-	100	63.539	Octodon_degus
ENSGALG00000037946	-	100	77.540	ENSODEG00000017696	-	100	77.867	Octodon_degus
ENSGALG00000037946	-	100	70.732	ENSOANG00000003143	-	84	70.461	Ornithorhynchus_anatinus
ENSGALG00000037946	-	100	75.881	ENSOANG00000011036	-	100	75.068	Ornithorhynchus_anatinus
ENSGALG00000037946	-	100	77.540	ENSOCUG00000006695	LARK	100	77.867	Oryctolagus_cuniculus
ENSGALG00000037946	-	100	74.734	ENSOCUG00000004731	RBM4	100	76.658	Oryctolagus_cuniculus
ENSGALG00000037946	-	100	75.597	ENSOGAG00000015647	RBM4	100	76.127	Otolemur_garnettii
ENSGALG00000037946	-	100	77.540	ENSOGAG00000015648	RBM4B	100	77.867	Otolemur_garnettii
ENSGALG00000037946	-	100	76.738	ENSOARG00000007700	RBM4	100	76.738	Ovis_aries
ENSGALG00000037946	-	100	76.800	ENSOARG00000007759	RBM4B	100	76.596	Ovis_aries
ENSGALG00000037946	-	100	77.273	ENSPPAG00000015125	RBM4B	97	97.122	Pan_paniscus
ENSGALG00000037946	-	100	75.000	ENSPPRG00000003533	RBM4	97	97.101	Panthera_pardus
ENSGALG00000037946	-	100	77.807	ENSPPRG00000003388	RBM4B	97	97.122	Panthera_pardus
ENSGALG00000037946	-	100	70.241	ENSPTIG00000016180	RBM4	97	97.826	Panthera_tigris_altaica
ENSGALG00000037946	-	100	77.807	ENSPTIG00000015426	RBM4B	97	97.122	Panthera_tigris_altaica
ENSGALG00000037946	-	100	77.273	ENSPTRG00000003935	RBM4B	97	97.122	Pan_troglodytes
ENSGALG00000037946	-	100	77.273	ENSPANG00000020672	RBM4B	97	97.122	Papio_anubis
ENSGALG00000037946	-	100	91.848	ENSPSIG00000003430	-	100	91.848	Pelodiscus_sinensis
ENSGALG00000037946	-	77	94.346	ENSPSIG00000003477	-	95	94.425	Pelodiscus_sinensis
ENSGALG00000037946	-	100	74.866	ENSPEMG00000009144	Rbm4b	100	76.000	Peromyscus_maniculatus_bairdii
ENSGALG00000037946	-	100	74.933	ENSPPYG00000003012	RBM4	100	75.266	Pongo_abelii
ENSGALG00000037946	-	100	77.273	ENSPPYG00000003010	RBM4B	100	77.600	Pongo_abelii
ENSGALG00000037946	-	100	76.011	ENSPCAG00000003393	-	100	77.128	Procavia_capensis
ENSGALG00000037946	-	100	77.005	ENSPCOG00000027885	RBM4B	97	97.122	Propithecus_coquereli
ENSGALG00000037946	-	100	77.778	ENSPVAG00000010487	RBM4B	100	77.333	Pteropus_vampyrus
ENSGALG00000037946	-	100	75.000	ENSPVAG00000010486	RBM4	100	76.923	Pteropus_vampyrus
ENSGALG00000037946	-	100	75.668	ENSRNOG00000061795	Rbm4b	100	76.800	Rattus_norvegicus
ENSGALG00000037946	-	100	76.064	ENSRNOG00000050741	Rbm4	97	97.826	Rattus_norvegicus
ENSGALG00000037946	-	100	77.273	ENSRBIG00000019394	RBM4B	97	97.122	Rhinopithecus_bieti
ENSGALG00000037946	-	100	77.273	ENSRROG00000032850	RBM4B	97	97.122	Rhinopithecus_roxellana
ENSGALG00000037946	-	100	76.738	ENSSBOG00000034474	RBM4B	97	96.403	Saimiri_boliviensis_boliviensis
ENSGALG00000037946	-	100	72.995	ENSSHAG00000008386	-	100	73.067	Sarcophilus_harrisii
ENSGALG00000037946	-	100	77.236	ENSSARG00000010710	RBM4B	100	76.800	Sorex_araneus
ENSGALG00000037946	-	100	75.000	ENSSSCG00000032437	RBM4	100	76.923	Sus_scrofa
ENSGALG00000037946	-	78	96.516	ENSTGUG00000016779	-	94	96.516	Taeniopygia_guttata
ENSGALG00000037946	-	62	88.073	ENSTBEG00000003727	-	69	88.073	Tupaia_belangeri
ENSGALG00000037946	-	100	75.936	ENSTBEG00000003748	RBM4B	100	76.800	Tupaia_belangeri
ENSGALG00000037946	-	100	77.540	ENSTTRG00000011166	RBM4B	100	77.867	Tursiops_truncatus
ENSGALG00000037946	-	100	74.734	ENSTTRG00000011164	RBM4	100	76.127	Tursiops_truncatus
ENSGALG00000037946	-	100	78.075	ENSUAMG00000004745	RBM4B	100	78.400	Ursus_americanus
ENSGALG00000037946	-	100	75.000	ENSUAMG00000014882	RBM4	97	97.101	Ursus_americanus
ENSGALG00000037946	-	63	89.177	ENSUMAG00000011738	-	97	97.101	Ursus_maritimus
ENSGALG00000037946	-	100	77.273	ENSVPAG00000001950	RBM4B	100	77.333	Vicugna_pacos
ENSGALG00000037946	-	100	75.472	ENSVPAG00000001949	RBM4	100	75.741	Vicugna_pacos
ENSGALG00000037946	-	100	78.049	ENSVVUG00000010619	RBM4B	100	77.867	Vulpes_vulpes
ENSGALG00000037946	-	100	74.468	ENSVVUG00000010622	RBM4	100	76.393	Vulpes_vulpes