EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000038160 (Gene tree)
Gene ID: 422910
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 24809 bases
Position: chr4:85439553-85464361
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000045283	RNA_pol_Rpb1_5	PF04998.17	3.4e-68	1	1
ENSGALP00000045283	RNA_pol_Rpb1_4	PF05000.17	6.7e-24	1	1
ENSGALP00000045283	RNA_pol_Rpb1_2	PF00623.20	1e-68	1	1
ENSGALP00000045283	RNA_pol_Rpb1_3	PF04983.18	4.4e-38	1	1
ENSGALP00000045283	RNA_pol_Rpb1_1	PF04997.12	8.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000067463	-	4665	-	ENSGALP00000045283	1554 (aa)	-	A0A1D5NY28

Gene Model

Click here to download ENSGALG00000038160's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000038160's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000038160	-	99	69.571	ENSG00000068654	POLR1A	90	69.571	Homo_sapiens
ENSGALG00000038160	-	75	67.715	ENSAPOG00000017945	polr1a	99	67.545	Acanthochromis_polyacanthus
ENSGALG00000038160	-	99	70.032	ENSAMEG00000005807	POLR1A	100	74.566	Ailuropoda_melanoleuca
ENSGALG00000038160	-	99	61.573	ENSACIG00000022147	polr1a	89	61.183	Amphilophus_citrinellus
ENSGALG00000038160	-	98	63.514	ENSAOCG00000017336	polr1a	89	64.865	Amphiprion_ocellaris
ENSGALG00000038160	-	98	63.514	ENSAPEG00000016105	polr1a	87	67.857	Amphiprion_percula
ENSGALG00000038160	-	98	62.789	ENSATEG00000016773	polr1a	89	63.030	Anabas_testudineus
ENSGALG00000038160	-	83	92.146	ENSAPLG00000013871	POLR1A	88	91.789	Anas_platyrhynchos
ENSGALG00000038160	-	98	70.382	ENSACAG00000012141	POLR1A	90	69.543	Anolis_carolinensis
ENSGALG00000038160	-	99	69.859	ENSANAG00000033927	POLR1A	90	69.730	Aotus_nancymaae
ENSGALG00000038160	-	99	59.715	ENSACLG00000020541	polr1a	89	59.573	Astatotilapia_calliptera
ENSGALG00000038160	-	99	70.428	ENSBTAG00000006481	POLR1A	90	70.298	Bos_taurus
ENSGALG00000038160	-	98	38.077	WBGene00012999	rpoa-1	88	37.688	Caenorhabditis_elegans
ENSGALG00000038160	-	99	68.742	ENSCJAG00000019547	POLR1A	90	69.300	Callithrix_jacchus
ENSGALG00000038160	-	99	69.844	ENSCAFG00000007613	POLR1A	90	70.233	Canis_familiaris
ENSGALG00000038160	-	99	70.097	ENSCAFG00020014752	POLR1A	95	76.034	Canis_lupus_dingo
ENSGALG00000038160	-	99	70.244	ENSCHIG00000018204	POLR1A	99	70.122	Capra_hircus
ENSGALG00000038160	-	99	69.285	ENSTSYG00000002761	POLR1A	90	69.221	Carlito_syrichta
ENSGALG00000038160	-	97	65.192	ENSCAPG00000010132	POLR1A	90	65.410	Cavia_aperea
ENSGALG00000038160	-	99	69.201	ENSCPOG00000012350	POLR1A	90	69.176	Cavia_porcellus
ENSGALG00000038160	-	99	69.300	ENSCCAG00000019839	POLR1A	90	69.300	Cebus_capucinus
ENSGALG00000038160	-	99	69.621	ENSCATG00000029786	POLR1A	90	69.621	Cercocebus_atys
ENSGALG00000038160	-	99	68.766	ENSCLAG00000005187	POLR1A	90	68.766	Chinchilla_lanigera
ENSGALG00000038160	-	99	69.107	ENSCSAG00000016251	POLR1A	90	69.557	Chlorocebus_sabaeus
ENSGALG00000038160	-	53	81.765	ENSCHOG00000003766	-	83	81.765	Choloepus_hoffmanni
ENSGALG00000038160	-	99	78.829	ENSCPBG00000001115	POLR1A	92	78.700	Chrysemys_picta_bellii
ENSGALG00000038160	-	98	48.000	ENSCSAVG00000007184	-	89	48.273	Ciona_savignyi
ENSGALG00000038160	-	99	66.560	ENSCANG00000031785	POLR1A	90	66.431	Colobus_angolensis_palliatus
ENSGALG00000038160	-	99	62.460	ENSCGRG00001006651	Polr1a	90	62.956	Cricetulus_griseus_chok1gshd
ENSGALG00000038160	-	55	66.088	ENSCGRG00000010834	Polr1a	84	66.859	Cricetulus_griseus_crigri
ENSGALG00000038160	-	98	59.519	ENSCSEG00000020190	polr1a	89	59.082	Cynoglossus_semilaevis
ENSGALG00000038160	-	98	61.036	ENSCVAG00000020941	polr1a	89	61.514	Cyprinodon_variegatus
ENSGALG00000038160	-	99	63.964	ENSDARG00000098375	polr1a	90	64.028	Danio_rerio
ENSGALG00000038160	-	99	67.503	ENSDNOG00000010829	POLR1A	90	66.924	Dasypus_novemcinctus
ENSGALG00000038160	-	99	67.951	ENSDORG00000008298	Polr1a	90	68.337	Dipodomys_ordii
ENSGALG00000038160	-	86	44.453	FBgn0019938	RpI1	89	41.710	Drosophila_melanogaster
ENSGALG00000038160	-	77	69.590	ENSETEG00000000412	-	70	69.590	Echinops_telfairi
ENSGALG00000038160	-	87	45.727	ENSEBUG00000005667	-	91	45.985	Eptatretus_burgeri
ENSGALG00000038160	-	99	70.071	ENSEASG00005001625	POLR1A	90	70.071	Equus_asinus_asinus
ENSGALG00000038160	-	94	75.312	ENSECAG00000030510	-	90	75.312	Equus_caballus
ENSGALG00000038160	-	94	75.312	ENSECAG00000036306	-	90	75.312	Equus_caballus
ENSGALG00000038160	-	94	75.312	ENSECAG00000010092	POLR1A	90	75.312	Equus_caballus
ENSGALG00000038160	-	81	79.973	ENSEEUG00000000676	POLR1A	73	79.973	Erinaceus_europaeus
ENSGALG00000038160	-	98	64.977	ENSELUG00000012769	polr1a	89	64.645	Esox_lucius
ENSGALG00000038160	-	99	70.289	ENSFCAG00000008966	POLR1A	90	70.161	Felis_catus
ENSGALG00000038160	-	98	87.484	ENSFALG00000010082	POLR1A	90	87.352	Ficedula_albicollis
ENSGALG00000038160	-	99	69.003	ENSFDAG00000013726	POLR1A	90	69.117	Fukomys_damarensis
ENSGALG00000038160	-	98	60.273	ENSFHEG00000005996	polr1a	89	60.026	Fundulus_heteroclitus
ENSGALG00000038160	-	98	58.497	ENSGMOG00000002230	polr1a	89	57.991	Gadus_morhua
ENSGALG00000038160	-	98	62.646	ENSGAFG00000015266	polr1a	89	61.228	Gambusia_affinis
ENSGALG00000038160	-	98	62.468	ENSGACG00000018791	polr1a	90	62.548	Gasterosteus_aculeatus
ENSGALG00000038160	-	88	78.587	ENSGAGG00000004984	-	96	84.111	Gopherus_agassizii
ENSGALG00000038160	-	99	69.571	ENSGGOG00000001788	POLR1A	90	69.571	Gorilla_gorilla
ENSGALG00000038160	-	89	63.752	ENSHBUG00000020021	polr1a	86	64.125	Haplochromis_burtoni
ENSGALG00000038160	-	99	69.596	ENSHGLG00000006334	POLR1A	91	69.128	Heterocephalus_glaber_female
ENSGALG00000038160	-	99	69.315	ENSHGLG00100006614	POLR1A	91	68.849	Heterocephalus_glaber_male
ENSGALG00000038160	-	98	60.417	ENSHCOG00000003345	polr1a	97	54.015	Hippocampus_comes
ENSGALG00000038160	-	99	65.058	ENSIPUG00000013174	polr1a	90	64.377	Ictalurus_punctatus
ENSGALG00000038160	-	99	68.706	ENSSTOG00000012580	POLR1A	91	68.706	Ictidomys_tridecemlineatus
ENSGALG00000038160	-	99	69.750	ENSJJAG00000013113	Polr1a	91	69.621	Jaculus_jaculus
ENSGALG00000038160	-	98	63.801	ENSKMAG00000007399	polr1a	89	63.613	Kryptolebias_marmoratus
ENSGALG00000038160	-	92	67.578	ENSLBEG00000015401	polr1a	88	67.578	Labrus_bergylta
ENSGALG00000038160	-	58	73.523	ENSLACG00000003218	polr1a	99	73.523	Latimeria_chalumnae
ENSGALG00000038160	-	99	67.979	ENSLOCG00000010881	polr1a	90	68.000	Lepisosteus_oculatus
ENSGALG00000038160	-	99	69.385	ENSLAFG00000014948	POLR1A	90	69.385	Loxodonta_africana
ENSGALG00000038160	-	99	69.750	ENSMFAG00000046097	POLR1A	90	69.621	Macaca_fascicularis
ENSGALG00000038160	-	99	69.750	ENSMMUG00000015815	POLR1A	90	69.621	Macaca_mulatta
ENSGALG00000038160	-	99	69.750	ENSMNEG00000043313	POLR1A	90	69.621	Macaca_nemestrina
ENSGALG00000038160	-	99	68.465	ENSMLEG00000042428	POLR1A	90	68.915	Mandrillus_leucophaeus
ENSGALG00000038160	-	98	64.491	ENSMAMG00000016565	polr1a	89	64.388	Mastacembelus_armatus
ENSGALG00000038160	-	99	63.777	ENSMZEG00005004915	polr1a	89	63.630	Maylandia_zebra
ENSGALG00000038160	-	98	95.817	ENSMGAG00000013111	POLR1A	89	95.817	Meleagris_gallopavo
ENSGALG00000038160	-	90	68.693	ENSMAUG00000008497	Polr1a	90	69.209	Mesocricetus_auratus
ENSGALG00000038160	-	99	69.320	ENSMICG00000000757	POLR1A	90	69.384	Microcebus_murinus
ENSGALG00000038160	-	99	68.614	ENSMOCG00000000122	Polr1a	91	69.167	Microtus_ochrogaster
ENSGALG00000038160	-	98	62.231	ENSMMOG00000010216	polr1a	89	62.010	Mola_mola
ENSGALG00000038160	-	97	68.840	ENSMODG00000009335	POLR1A	80	73.415	Monodelphis_domestica
ENSGALG00000038160	-	98	63.400	ENSMALG00000013363	polr1a	89	63.301	Monopterus_albus
ENSGALG00000038160	-	99	68.418	MGP_CAROLIEiJ_G0028494	Polr1a	99	60.932	Mus_caroli
ENSGALG00000038160	-	99	68.462	ENSMUSG00000049553	Polr1a	99	61.649	Mus_musculus
ENSGALG00000038160	-	99	69.380	MGP_PahariEiJ_G0022230	Polr1a	99	62.143	Mus_pahari
ENSGALG00000038160	-	99	66.960	MGP_SPRETEiJ_G0029499	Polr1a	99	61.649	Mus_spretus
ENSGALG00000038160	-	99	70.577	ENSMPUG00000009135	POLR1A	90	70.447	Mustela_putorius_furo
ENSGALG00000038160	-	99	69.221	ENSMLUG00000015723	POLR1A	90	69.674	Myotis_lucifugus
ENSGALG00000038160	-	99	68.902	ENSNGAG00000017907	Polr1a	91	69.186	Nannospalax_galili
ENSGALG00000038160	-	99	63.731	ENSNBRG00000000519	polr1a	89	63.601	Neolamprologus_brichardi
ENSGALG00000038160	-	99	68.694	ENSNLEG00000002264	POLR1A	90	68.694	Nomascus_leucogenys
ENSGALG00000038160	-	74	80.712	ENSMEUG00000011665	-	68	80.712	Notamacropus_eugenii
ENSGALG00000038160	-	99	65.020	ENSOPRG00000008269	POLR1A	91	64.779	Ochotona_princeps
ENSGALG00000038160	-	99	69.072	ENSODEG00000003542	POLR1A	90	69.077	Octodon_degus
ENSGALG00000038160	-	99	64.137	ENSONIG00000015895	polr1a	90	64.073	Oreochromis_niloticus
ENSGALG00000038160	-	99	69.968	ENSOCUG00000010138	POLR1A	90	69.904	Oryctolagus_cuniculus
ENSGALG00000038160	-	98	63.636	ENSORLG00000008753	polr1a	89	63.748	Oryzias_latipes
ENSGALG00000038160	-	98	62.264	ENSORLG00020020726	polr1a	89	61.638	Oryzias_latipes_hni
ENSGALG00000038160	-	93	74.444	ENSORLG00015016071	polr1a	87	74.444	Oryzias_latipes_hsok
ENSGALG00000038160	-	99	69.610	ENSOGAG00000004031	POLR1A	90	69.660	Otolemur_garnettii
ENSGALG00000038160	-	99	70.330	ENSOARG00000020601	POLR1A	90	69.814	Ovis_aries
ENSGALG00000038160	-	99	69.635	ENSPPAG00000042450	POLR1A	90	69.635	Pan_paniscus
ENSGALG00000038160	-	99	70.577	ENSPPRG00000006702	POLR1A	90	70.447	Panthera_pardus
ENSGALG00000038160	-	99	70.110	ENSPTIG00000018783	POLR1A	90	69.981	Panthera_tigris_altaica
ENSGALG00000038160	-	99	68.902	ENSPTRG00000012147	POLR1A	90	69.571	Pan_troglodytes
ENSGALG00000038160	-	99	69.428	ENSPANG00000025908	POLR1A	90	69.428	Papio_anubis
ENSGALG00000038160	-	92	72.143	ENSPKIG00000005468	polr1a	88	72.143	Paramormyrops_kingsleyae
ENSGALG00000038160	-	58	75.326	ENSPSIG00000009321	-	85	75.163	Pelodiscus_sinensis
ENSGALG00000038160	-	60	67.129	ENSPMGG00000009718	polr1a	95	67.129	Periophthalmus_magnuspinnatus
ENSGALG00000038160	-	99	69.359	ENSPEMG00000022224	Polr1a	91	69.359	Peromyscus_maniculatus_bairdii
ENSGALG00000038160	-	99	70.660	ENSPCIG00000004222	POLR1A	94	69.968	Phascolarctos_cinereus
ENSGALG00000038160	-	98	63.212	ENSPFOG00000005025	polr1a	89	63.407	Poecilia_formosa
ENSGALG00000038160	-	98	63.448	ENSPLAG00000021389	polr1a	89	63.571	Poecilia_latipinna
ENSGALG00000038160	-	98	61.324	ENSPMEG00000006463	polr1a	89	61.772	Poecilia_mexicana
ENSGALG00000038160	-	98	63.625	ENSPREG00000002389	polr1a	89	63.566	Poecilia_reticulata
ENSGALG00000038160	-	99	68.786	ENSPPYG00000012217	POLR1A	90	68.786	Pongo_abelii
ENSGALG00000038160	-	88	68.885	ENSPCAG00000011582	POLR1A	80	68.885	Procavia_capensis
ENSGALG00000038160	-	99	69.590	ENSPCOG00000026987	POLR1A	91	69.654	Propithecus_coquereli
ENSGALG00000038160	-	93	68.452	ENSPVAG00000012674	POLR1A	86	68.285	Pteropus_vampyrus
ENSGALG00000038160	-	99	63.713	ENSPNYG00000000026	polr1a	89	63.566	Pundamilia_nyererei
ENSGALG00000038160	-	99	65.026	ENSPNAG00000019223	polr1a	89	67.030	Pygocentrus_nattereri
ENSGALG00000038160	-	99	69.403	ENSRNOG00000009545	Polr1a	91	69.423	Rattus_norvegicus
ENSGALG00000038160	-	99	69.162	ENSRBIG00000028335	POLR1A	90	69.300	Rhinopithecus_bieti
ENSGALG00000038160	-	99	69.098	ENSRROG00000031473	POLR1A	90	69.236	Rhinopithecus_roxellana
ENSGALG00000038160	-	97	38.122	YOR341W	RPA190	88	37.688	Saccharomyces_cerevisiae
ENSGALG00000038160	-	99	68.549	ENSSBOG00000030262	POLR1A	90	69.107	Saimiri_boliviensis_boliviensis
ENSGALG00000038160	-	99	63.735	ENSSHAG00000014739	POLR1A	91	63.416	Sarcophilus_harrisii
ENSGALG00000038160	-	91	69.392	ENSSFOG00015019716	polr1a	90	65.176	Scleropages_formosus
ENSGALG00000038160	-	98	63.990	ENSSMAG00000014342	polr1a	89	63.948	Scophthalmus_maximus
ENSGALG00000038160	-	98	64.114	ENSSDUG00000014631	polr1a	89	64.337	Seriola_dumerili
ENSGALG00000038160	-	98	62.100	ENSSLDG00000024095	polr1a	89	62.394	Seriola_lalandi_dorsalis
ENSGALG00000038160	-	68	92.683	ENSSARG00000003136	-	65	92.683	Sorex_araneus
ENSGALG00000038160	-	99	72.020	ENSSPUG00000004215	POLR1A	89	76.952	Sphenodon_punctatus
ENSGALG00000038160	-	69	71.640	ENSSPAG00000016341	polr1a	93	71.640	Stegastes_partitus
ENSGALG00000038160	-	91	72.561	ENSSSCG00000008226	POLR1A	99	72.465	Sus_scrofa
ENSGALG00000038160	-	97	86.280	ENSTGUG00000010704	POLR1A	90	86.139	Taeniopygia_guttata
ENSGALG00000038160	-	98	62.337	ENSTRUG00000002210	polr1a	97	64.465	Takifugu_rubripes
ENSGALG00000038160	-	98	58.831	ENSTNIG00000010116	polr1a	89	58.831	Tetraodon_nigroviridis
ENSGALG00000038160	-	74	85.841	ENSTBEG00000008646	POLR1A	67	85.841	Tupaia_belangeri
ENSGALG00000038160	-	99	67.359	ENSTTRG00000008597	POLR1A	90	67.207	Tursiops_truncatus
ENSGALG00000038160	-	64	70.348	ENSUAMG00000012158	-	81	70.149	Ursus_americanus
ENSGALG00000038160	-	99	69.630	ENSUMAG00000006700	POLR1A	97	74.973	Ursus_maritimus
ENSGALG00000038160	-	99	70.298	ENSVVUG00000001245	POLR1A	90	70.169	Vulpes_vulpes
ENSGALG00000038160	-	99	65.307	ENSXETG00000001952	polr1a	99	67.697	Xenopus_tropicalis
ENSGALG00000038160	-	98	63.202	ENSXMAG00000004032	polr1a	89	62.420	Xiphophorus_maculatus