EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000038260 (Gene tree)
Gene ID: 427217
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 16535 bases
Position: chrZ:25250237-25266771
Accession: 427217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000052651	MRP-S27	PF10037.9	3.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000074012	PTCD2-201	1249	XM_424804	ENSGALP00000052651	381 (aa)	XP_424804	A0A1D5PIL7

Gene Model

Click here to download ENSGALG00000038260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000038260's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000038260	PTCD2	92	51.143	ENSG00000049883	PTCD2	100	47.783	Homo_sapiens
ENSGALG00000038260	PTCD2	92	44.915	ENSAPOG00000020682	ptcd2	92	44.915	Acanthochromis_polyacanthus
ENSGALG00000038260	PTCD2	93	49.575	ENSAMEG00000007194	PTCD2	91	49.575	Ailuropoda_melanoleuca
ENSGALG00000038260	PTCD2	91	42.693	ENSACIG00000002053	ptcd2	100	42.693	Amphilophus_citrinellus
ENSGALG00000038260	PTCD2	92	44.915	ENSAOCG00000006616	ptcd2	91	44.915	Amphiprion_ocellaris
ENSGALG00000038260	PTCD2	92	44.915	ENSAPEG00000022926	ptcd2	91	44.915	Amphiprion_percula
ENSGALG00000038260	PTCD2	99	55.118	ENSACAG00000009747	PTCD2	91	56.780	Anolis_carolinensis
ENSGALG00000038260	PTCD2	93	50.000	ENSANAG00000029353	PTCD2	91	50.000	Aotus_nancymaae
ENSGALG00000038260	PTCD2	92	44.633	ENSACLG00000027742	ptcd2	91	44.633	Astatotilapia_calliptera
ENSGALG00000038260	PTCD2	93	40.510	ENSAMXG00000029404	ptcd2	88	41.212	Astyanax_mexicanus
ENSGALG00000038260	PTCD2	100	47.532	ENSBTAG00000014675	PTCD2	92	49.008	Bos_taurus
ENSGALG00000038260	PTCD2	93	51.685	ENSCJAG00000016364	PTCD2	91	51.685	Callithrix_jacchus
ENSGALG00000038260	PTCD2	100	50.260	ENSCAFG00000007982	PTCD2	83	51.977	Canis_familiaris
ENSGALG00000038260	PTCD2	91	52.312	ENSCAFG00020019147	PTCD2	97	52.312	Canis_lupus_dingo
ENSGALG00000038260	PTCD2	100	48.052	ENSCHIG00000017118	PTCD2	92	49.858	Capra_hircus
ENSGALG00000038260	PTCD2	100	46.753	ENSCPOG00000040168	PTCD2	92	48.159	Cavia_porcellus
ENSGALG00000038260	PTCD2	93	49.435	ENSCCAG00000029389	-	91	49.435	Cebus_capucinus
ENSGALG00000038260	PTCD2	76	51.203	ENSCCAG00000021996	-	89	51.203	Cebus_capucinus
ENSGALG00000038260	PTCD2	100	49.219	ENSCATG00000019069	PTCD2	91	51.429	Cercocebus_atys
ENSGALG00000038260	PTCD2	100	47.396	ENSCLAG00000000072	PTCD2	91	49.568	Chinchilla_lanigera
ENSGALG00000038260	PTCD2	100	48.958	ENSCSAG00000015623	PTCD2	92	50.565	Chlorocebus_sabaeus
ENSGALG00000038260	PTCD2	72	56.471	ENSCHOG00000010634	PTCD2	79	56.471	Choloepus_hoffmanni
ENSGALG00000038260	PTCD2	100	54.569	ENSCPBG00000000216	PTCD2	91	56.742	Chrysemys_picta_bellii
ENSGALG00000038260	PTCD2	100	49.479	ENSCANG00000035636	PTCD2	90	51.429	Colobus_angolensis_palliatus
ENSGALG00000038260	PTCD2	93	50.847	ENSCGRG00001015289	Ptcd2	78	50.847	Cricetulus_griseus_chok1gshd
ENSGALG00000038260	PTCD2	93	50.847	ENSCGRG00000006193	Ptcd2	78	50.847	Cricetulus_griseus_crigri
ENSGALG00000038260	PTCD2	99	41.689	ENSCVAG00000001285	ptcd2	89	43.516	Cyprinodon_variegatus
ENSGALG00000038260	PTCD2	97	45.676	ENSDARG00000035391	ptcd2	92	46.328	Danio_rerio
ENSGALG00000038260	PTCD2	99	51.175	ENSDNOG00000008719	PTCD2	92	52.408	Dasypus_novemcinctus
ENSGALG00000038260	PTCD2	92	48.857	ENSDORG00000004921	Ptcd2	90	48.857	Dipodomys_ordii
ENSGALG00000038260	PTCD2	93	46.779	ENSETEG00000016542	PTCD2	92	46.779	Echinops_telfairi
ENSGALG00000038260	PTCD2	95	49.591	ENSEASG00005018038	PTCD2	93	49.719	Equus_asinus_asinus
ENSGALG00000038260	PTCD2	93	49.718	ENSECAG00000007022	PTCD2	91	49.718	Equus_caballus
ENSGALG00000038260	PTCD2	93	49.292	ENSEEUG00000014031	PTCD2	91	49.292	Erinaceus_europaeus
ENSGALG00000038260	PTCD2	93	44.350	ENSELUG00000003584	ptcd2	92	44.350	Esox_lucius
ENSGALG00000038260	PTCD2	82	53.674	ENSFCAG00000045432	PTCD2	73	53.674	Felis_catus
ENSGALG00000038260	PTCD2	86	80.428	ENSFALG00000010299	PTCD2	99	80.428	Ficedula_albicollis
ENSGALG00000038260	PTCD2	93	47.592	ENSFDAG00000018461	PTCD2	92	47.592	Fukomys_damarensis
ENSGALG00000038260	PTCD2	100	41.969	ENSGMOG00000003637	ptcd2	90	43.966	Gadus_morhua
ENSGALG00000038260	PTCD2	100	60.052	ENSGAGG00000021952	PTCD2	91	62.640	Gopherus_agassizii
ENSGALG00000038260	PTCD2	92	51.143	ENSGGOG00000010695	PTCD2	90	51.143	Gorilla_gorilla
ENSGALG00000038260	PTCD2	92	44.633	ENSHBUG00000009191	ptcd2	91	44.633	Haplochromis_burtoni
ENSGALG00000038260	PTCD2	100	47.396	ENSHGLG00000001234	PTCD2	92	48.725	Heterocephalus_glaber_female
ENSGALG00000038260	PTCD2	93	48.725	ENSHGLG00100015419	PTCD2	92	48.725	Heterocephalus_glaber_male
ENSGALG00000038260	PTCD2	100	40.838	ENSHCOG00000001703	ptcd2	92	41.972	Hippocampus_comes
ENSGALG00000038260	PTCD2	87	41.194	ENSIPUG00000006080	ptcd2	87	41.194	Ictalurus_punctatus
ENSGALG00000038260	PTCD2	100	49.351	ENSSTOG00000006596	PTCD2	93	50.986	Ictidomys_tridecemlineatus
ENSGALG00000038260	PTCD2	100	50.260	ENSJJAG00000024388	Ptcd2	92	51.977	Jaculus_jaculus
ENSGALG00000038260	PTCD2	89	38.953	ENSKMAG00000009329	ptcd2	89	38.953	Kryptolebias_marmoratus
ENSGALG00000038260	PTCD2	99	43.799	ENSLBEG00000024871	ptcd2	91	45.763	Labrus_bergylta
ENSGALG00000038260	PTCD2	93	49.718	ENSLOCG00000011122	ptcd2	92	49.718	Lepisosteus_oculatus
ENSGALG00000038260	PTCD2	72	55.636	ENSLAFG00000004115	PTCD2	90	55.160	Loxodonta_africana
ENSGALG00000038260	PTCD2	100	49.479	ENSMFAG00000031516	PTCD2	90	51.714	Macaca_fascicularis
ENSGALG00000038260	PTCD2	100	49.741	ENSMNEG00000007537	PTCD2	91	51.429	Macaca_nemestrina
ENSGALG00000038260	PTCD2	100	49.219	ENSMLEG00000031093	PTCD2	90	51.429	Mandrillus_leucophaeus
ENSGALG00000038260	PTCD2	91	46.398	ENSMAMG00000018529	ptcd2	91	46.398	Mastacembelus_armatus
ENSGALG00000038260	PTCD2	92	44.633	ENSMZEG00005003625	ptcd2	91	44.633	Maylandia_zebra
ENSGALG00000038260	PTCD2	91	93.084	ENSMGAG00000005033	PTCD2	99	93.084	Meleagris_gallopavo
ENSGALG00000038260	PTCD2	93	39.831	ENSMAUG00000020253	Ptcd2	92	39.831	Mesocricetus_auratus
ENSGALG00000038260	PTCD2	93	50.000	ENSMICG00000004535	PTCD2	91	50.000	Microcebus_murinus
ENSGALG00000038260	PTCD2	93	48.870	ENSMOCG00000019985	Ptcd2	93	48.870	Microtus_ochrogaster
ENSGALG00000038260	PTCD2	99	49.608	ENSMODG00000001695	PTCD2	93	50.980	Monodelphis_domestica
ENSGALG00000038260	PTCD2	92	42.655	ENSMALG00000022372	ptcd2	92	42.655	Monopterus_albus
ENSGALG00000038260	PTCD2	100	46.597	MGP_CAROLIEiJ_G0018829	Ptcd2	93	48.023	Mus_caroli
ENSGALG00000038260	PTCD2	100	46.859	ENSMUSG00000021650	Ptcd2	93	48.305	Mus_musculus
ENSGALG00000038260	PTCD2	93	48.023	MGP_PahariEiJ_G0015904	Ptcd2	93	48.023	Mus_pahari
ENSGALG00000038260	PTCD2	100	47.644	MGP_SPRETEiJ_G0019711	Ptcd2	93	49.153	Mus_spretus
ENSGALG00000038260	PTCD2	93	51.275	ENSMPUG00000014401	PTCD2	92	51.275	Mustela_putorius_furo
ENSGALG00000038260	PTCD2	92	49.143	ENSMLUG00000007374	PTCD2	96	47.978	Myotis_lucifugus
ENSGALG00000038260	PTCD2	96	45.812	ENSNGAG00000005027	Ptcd2	92	47.875	Nannospalax_galili
ENSGALG00000038260	PTCD2	87	43.030	ENSNBRG00000000092	-	100	43.030	Neolamprologus_brichardi
ENSGALG00000038260	PTCD2	92	44.915	ENSNBRG00000008174	ptcd2	92	44.915	Neolamprologus_brichardi
ENSGALG00000038260	PTCD2	100	49.741	ENSNLEG00000004516	PTCD2	90	52.000	Nomascus_leucogenys
ENSGALG00000038260	PTCD2	93	48.305	ENSOPRG00000007290	PTCD2	91	48.305	Ochotona_princeps
ENSGALG00000038260	PTCD2	100	47.781	ENSODEG00000016417	PTCD2	92	49.435	Octodon_degus
ENSGALG00000038260	PTCD2	76	47.603	ENSONIG00000011269	ptcd2	85	47.603	Oreochromis_niloticus
ENSGALG00000038260	PTCD2	93	48.159	ENSOCUG00000007970	PTCD2	92	48.159	Oryctolagus_cuniculus
ENSGALG00000038260	PTCD2	94	40.782	ENSORLG00000003851	ptcd2	92	40.782	Oryzias_latipes
ENSGALG00000038260	PTCD2	94	40.223	ENSORLG00020009823	ptcd2	93	40.223	Oryzias_latipes_hni
ENSGALG00000038260	PTCD2	92	42.000	ENSORLG00015016777	ptcd2	99	42.000	Oryzias_latipes_hsok
ENSGALG00000038260	PTCD2	93	42.373	ENSOMEG00000012396	ptcd2	86	42.373	Oryzias_melastigma
ENSGALG00000038260	PTCD2	93	49.157	ENSOGAG00000008390	PTCD2	92	49.157	Otolemur_garnettii
ENSGALG00000038260	PTCD2	100	47.792	ENSOARG00000005087	PTCD2	91	49.575	Ovis_aries
ENSGALG00000038260	PTCD2	92	51.143	ENSPPAG00000028480	PTCD2	90	51.143	Pan_paniscus
ENSGALG00000038260	PTCD2	92	50.857	ENSPTRG00000016968	PTCD2	90	50.857	Pan_troglodytes
ENSGALG00000038260	PTCD2	91	51.884	ENSPANG00000006611	PTCD2	89	51.884	Papio_anubis
ENSGALG00000038260	PTCD2	93	47.059	ENSPKIG00000019896	ptcd2	92	47.059	Paramormyrops_kingsleyae
ENSGALG00000038260	PTCD2	82	61.859	ENSPSIG00000014559	PTCD2	97	61.859	Pelodiscus_sinensis
ENSGALG00000038260	PTCD2	88	53.412	ENSPEMG00000000884	Ptcd2	88	53.412	Peromyscus_maniculatus_bairdii
ENSGALG00000038260	PTCD2	100	49.610	ENSPCIG00000029047	PTCD2	93	50.140	Phascolarctos_cinereus
ENSGALG00000038260	PTCD2	99	41.161	ENSPLAG00000010456	ptcd2	92	42.938	Poecilia_latipinna
ENSGALG00000038260	PTCD2	99	40.897	ENSPREG00000021797	ptcd2	88	42.651	Poecilia_reticulata
ENSGALG00000038260	PTCD2	100	42.746	ENSPPYG00000015543	PTCD2	89	44.000	Pongo_abelii
ENSGALG00000038260	PTCD2	80	43.506	ENSPCAG00000006806	PTCD2	89	46.237	Procavia_capensis
ENSGALG00000038260	PTCD2	100	47.135	ENSPVAG00000010935	PTCD2	92	48.459	Pteropus_vampyrus
ENSGALG00000038260	PTCD2	92	44.350	ENSPNYG00000003122	ptcd2	91	44.350	Pundamilia_nyererei
ENSGALG00000038260	PTCD2	99	43.307	ENSPNAG00000021490	ptcd2	93	44.258	Pygocentrus_nattereri
ENSGALG00000038260	PTCD2	93	49.435	ENSRNOG00000028403	Ptcd2	93	49.435	Rattus_norvegicus
ENSGALG00000038260	PTCD2	99	45.093	ENSRBIG00000032929	PTCD2	90	46.571	Rhinopithecus_bieti
ENSGALG00000038260	PTCD2	100	49.482	ENSRROG00000000080	PTCD2	91	51.143	Rhinopithecus_roxellana
ENSGALG00000038260	PTCD2	93	50.000	ENSSBOG00000018911	PTCD2	92	50.000	Saimiri_boliviensis_boliviensis
ENSGALG00000038260	PTCD2	99	46.997	ENSSHAG00000003833	PTCD2	92	48.179	Sarcophilus_harrisii
ENSGALG00000038260	PTCD2	92	49.008	ENSSFOG00015015415	ptcd2	92	49.008	Scleropages_formosus
ENSGALG00000038260	PTCD2	99	39.894	ENSSMAG00000010350	ptcd2	92	40.960	Scophthalmus_maximus
ENSGALG00000038260	PTCD2	91	45.402	ENSSDUG00000008142	ptcd2	87	45.402	Seriola_dumerili
ENSGALG00000038260	PTCD2	91	45.690	ENSSLDG00000015284	ptcd2	91	45.690	Seriola_lalandi_dorsalis
ENSGALG00000038260	PTCD2	81	45.484	ENSSARG00000004983	PTCD2	89	47.143	Sorex_araneus
ENSGALG00000038260	PTCD2	100	49.347	ENSSPUG00000000176	PTCD2	90	51.685	Sphenodon_punctatus
ENSGALG00000038260	PTCD2	91	44.638	ENSSPAG00000008591	ptcd2	89	44.638	Stegastes_partitus
ENSGALG00000038260	PTCD2	93	49.008	ENSSSCG00000016975	PTCD2	83	49.008	Sus_scrofa
ENSGALG00000038260	PTCD2	91	77.457	ENSTGUG00000005705	PTCD2	100	77.457	Taeniopygia_guttata
ENSGALG00000038260	PTCD2	99	47.656	ENSTBEG00000016559	PTCD2	91	49.292	Tupaia_belangeri
ENSGALG00000038260	PTCD2	95	50.409	ENSTTRG00000011851	PTCD2	91	50.708	Tursiops_truncatus
ENSGALG00000038260	PTCD2	93	50.142	ENSUAMG00000007583	PTCD2	83	50.142	Ursus_americanus
ENSGALG00000038260	PTCD2	93	50.142	ENSUMAG00000007666	PTCD2	92	50.142	Ursus_maritimus
ENSGALG00000038260	PTCD2	93	48.305	ENSVPAG00000009597	PTCD2	91	48.305	Vicugna_pacos
ENSGALG00000038260	PTCD2	100	49.740	ENSVVUG00000007299	-	94	50.970	Vulpes_vulpes
ENSGALG00000038260	PTCD2	100	46.073	ENSXETG00000031652	PTCD2	92	47.578	Xenopus_tropicalis
ENSGALG00000038260	PTCD2	99	41.425	ENSXMAG00000005940	ptcd2	84	43.503	Xiphophorus_maculatus