EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000038884 (Gene tree)
Gene ID: 396269
Gene Symbol: SRL
Alias: -
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 19020 bases
Position: chr14:13059180-13078199
Accession: 11295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000049285	MMR_HSR1	PF01926.23	2.7e-08	1	1
ENSGALP00000053831	MMR_HSR1	PF01926.23	7.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000061825	SRL-201	1674	-	ENSGALP00000049285	472 (aa)	-	A0A1D5P984
ENSGALT00000074172	SRL-202	2373	-	ENSGALP00000053831	790 (aa)	-	A0A1D5PLW0

Gene Model

Click here to download ENSGALG00000038884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000038884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000038884	SRL	96	90.330	ENSG00000185739	SRL	99	92.075	Homo_sapiens
ENSGALG00000038884	SRL	95	75.391	ENSAPOG00000012432	SRL	99	75.391	Acanthochromis_polyacanthus
ENSGALG00000038884	SRL	99	80.679	ENSAPOG00000018093	srl	99	82.993	Acanthochromis_polyacanthus
ENSGALG00000038884	SRL	97	90.810	ENSAMEG00000010862	SRL	52	90.652	Ailuropoda_melanoleuca
ENSGALG00000038884	SRL	93	83.864	ENSACIG00000015799	srl	98	83.864	Amphilophus_citrinellus
ENSGALG00000038884	SRL	93	76.818	ENSACIG00000015419	SRL	98	76.818	Amphilophus_citrinellus
ENSGALG00000038884	SRL	92	84.028	ENSAOCG00000007574	srl	99	84.028	Amphiprion_ocellaris
ENSGALG00000038884	SRL	97	73.856	ENSAOCG00000017049	SRL	99	73.856	Amphiprion_ocellaris
ENSGALG00000038884	SRL	97	70.306	ENSAPEG00000006533	SRL	99	71.024	Amphiprion_percula
ENSGALG00000038884	SRL	99	80.892	ENSAPEG00000006911	srl	99	80.892	Amphiprion_percula
ENSGALG00000038884	SRL	95	71.861	ENSATEG00000009643	SRL	53	72.294	Anabas_testudineus
ENSGALG00000038884	SRL	98	81.425	ENSATEG00000024315	srl	99	80.892	Anabas_testudineus
ENSGALG00000038884	SRL	99	87.474	ENSACAG00000016380	SRL	85	92.888	Anolis_carolinensis
ENSGALG00000038884	SRL	93	73.510	ENSACLG00000024674	SRL	55	75.184	Astatotilapia_calliptera
ENSGALG00000038884	SRL	98	81.857	ENSACLG00000027685	srl	96	83.864	Astatotilapia_calliptera
ENSGALG00000038884	SRL	88	77.295	ENSAMXG00000038693	SRL	99	72.727	Astyanax_mexicanus
ENSGALG00000038884	SRL	98	80.994	ENSAMXG00000018789	srl	91	80.994	Astyanax_mexicanus
ENSGALG00000038884	SRL	96	90.351	ENSBTAG00000001078	SRL	100	61.071	Bos_taurus
ENSGALG00000038884	SRL	93	91.136	ENSCJAG00000019750	SRL	99	88.771	Callithrix_jacchus
ENSGALG00000038884	SRL	96	90.529	ENSCAFG00000019233	SRL	84	90.529	Canis_familiaris
ENSGALG00000038884	SRL	96	90.929	ENSCAFG00020025024	SRL	56	90.929	Canis_lupus_dingo
ENSGALG00000038884	SRL	99	88.723	ENSCHIG00000017927	SRL	57	90.330	Capra_hircus
ENSGALG00000038884	SRL	99	89.407	ENSTSYG00000007919	SRL	99	92.308	Carlito_syrichta
ENSGALG00000038884	SRL	96	90.308	ENSCPOG00000012643	SRL	99	89.384	Cavia_porcellus
ENSGALG00000038884	SRL	93	85.455	ENSCCAG00000032646	SRL	99	91.799	Cebus_capucinus
ENSGALG00000038884	SRL	96	90.508	ENSCATG00000032227	-	99	89.195	Cercocebus_atys
ENSGALG00000038884	SRL	96	90.308	ENSCLAG00000016242	SRL	99	89.384	Chinchilla_lanigera
ENSGALG00000038884	SRL	82	93.005	ENSCHOG00000001618	SRL	52	93.005	Choloepus_hoffmanni
ENSGALG00000038884	SRL	96	96.382	ENSCPBG00000026371	SRL	100	91.116	Chrysemys_picta_bellii
ENSGALG00000038884	SRL	93	57.456	ENSCING00000005231	-	98	57.456	Ciona_intestinalis
ENSGALG00000038884	SRL	96	90.287	ENSCANG00000035872	SRL	99	92.075	Colobus_angolensis_palliatus
ENSGALG00000038884	SRL	97	89.059	ENSCGRG00001016630	Srl	99	88.535	Cricetulus_griseus_chok1gshd
ENSGALG00000038884	SRL	97	89.059	ENSCGRG00000005458	Srl	99	88.535	Cricetulus_griseus_crigri
ENSGALG00000038884	SRL	99	68.577	ENSCSEG00000011866	SRL	94	68.577	Cynoglossus_semilaevis
ENSGALG00000038884	SRL	98	82.289	ENSCSEG00000016151	srl	98	82.289	Cynoglossus_semilaevis
ENSGALG00000038884	SRL	98	81.857	ENSCVAG00000003513	srl	99	81.034	Cyprinodon_variegatus
ENSGALG00000038884	SRL	93	74.889	ENSCVAG00000022465	SRL	59	74.889	Cyprinodon_variegatus
ENSGALG00000038884	SRL	80	75.979	ENSDARG00000112959	CABZ01072309.1	99	75.979	Danio_rerio
ENSGALG00000038884	SRL	99	81.741	ENSDARG00000104587	srl	99	81.741	Danio_rerio
ENSGALG00000038884	SRL	95	90.222	ENSDNOG00000011643	SRL	54	89.890	Dasypus_novemcinctus
ENSGALG00000038884	SRL	96	90.110	ENSDORG00000014807	Srl	99	89.195	Dipodomys_ordii
ENSGALG00000038884	SRL	78	65.691	ENSEBUG00000015937	srl	95	65.691	Eptatretus_burgeri
ENSGALG00000038884	SRL	95	90.466	ENSEASG00005000942	SRL	55	90.132	Equus_asinus_asinus
ENSGALG00000038884	SRL	100	89.641	ENSECAG00000024219	SRL	100	89.641	Equus_caballus
ENSGALG00000038884	SRL	98	79.749	ENSELUG00000015616	srl	96	81.799	Esox_lucius
ENSGALG00000038884	SRL	99	89.195	ENSFCAG00000022075	SRL	99	90.042	Felis_catus
ENSGALG00000038884	SRL	96	97.345	ENSFALG00000004328	SRL	99	68.193	Ficedula_albicollis
ENSGALG00000038884	SRL	95	90.687	ENSFDAG00000006199	SRL	99	88.936	Fukomys_damarensis
ENSGALG00000038884	SRL	99	80.679	ENSFHEG00000011239	srl	98	81.210	Fundulus_heteroclitus
ENSGALG00000038884	SRL	98	72.956	ENSFHEG00000011854	SRL	99	75.839	Fundulus_heteroclitus
ENSGALG00000038884	SRL	93	80.310	ENSGMOG00000014954	srl	99	82.080	Gadus_morhua
ENSGALG00000038884	SRL	99	81.104	ENSGAFG00000000010	srl	99	82.096	Gambusia_affinis
ENSGALG00000038884	SRL	93	76.818	ENSGAFG00000016984	SRL	98	76.818	Gambusia_affinis
ENSGALG00000038884	SRL	93	80.752	ENSGACG00000011332	srl	99	82.743	Gasterosteus_aculeatus
ENSGALG00000038884	SRL	96	93.805	ENSGAGG00000015590	SRL	50	89.421	Gopherus_agassizii
ENSGALG00000038884	SRL	97	89.497	ENSGGOG00000011312	-	99	88.771	Gorilla_gorilla
ENSGALG00000038884	SRL	98	81.857	ENSHBUG00000007581	srl	96	83.864	Haplochromis_burtoni
ENSGALG00000038884	SRL	93	73.289	ENSHBUG00000015710	SRL	56	73.289	Haplochromis_burtoni
ENSGALG00000038884	SRL	96	90.088	ENSHGLG00000015271	SRL	99	89.172	Heterocephalus_glaber_female
ENSGALG00000038884	SRL	96	90.088	ENSHGLG00100019378	SRL	99	89.172	Heterocephalus_glaber_male
ENSGALG00000038884	SRL	93	72.506	ENSHCOG00000001012	SRL	50	72.506	Hippocampus_comes
ENSGALG00000038884	SRL	99	81.720	ENSHCOG00000008687	srl	98	83.636	Hippocampus_comes
ENSGALG00000038884	SRL	99	79.618	ENSIPUG00000012513	srl	99	79.618	Ictalurus_punctatus
ENSGALG00000038884	SRL	89	70.213	ENSIPUG00000011609	SRL	92	70.213	Ictalurus_punctatus
ENSGALG00000038884	SRL	97	89.497	ENSSTOG00000021151	-	99	88.535	Ictidomys_tridecemlineatus
ENSGALG00000038884	SRL	99	88.747	ENSJJAG00000016400	Srl	99	88.747	Jaculus_jaculus
ENSGALG00000038884	SRL	93	76.591	ENSKMAG00000019537	SRL	99	76.591	Kryptolebias_marmoratus
ENSGALG00000038884	SRL	96	82.599	ENSKMAG00000014115	srl	93	86.429	Kryptolebias_marmoratus
ENSGALG00000038884	SRL	97	73.799	ENSLBEG00000013811	SRL	99	73.799	Labrus_bergylta
ENSGALG00000038884	SRL	99	80.679	ENSLBEG00000026643	srl	99	80.679	Labrus_bergylta
ENSGALG00000038884	SRL	96	86.475	ENSLACG00000002825	SRL	99	86.475	Latimeria_chalumnae
ENSGALG00000038884	SRL	99	83.691	ENSLOCG00000002644	srl	99	83.691	Lepisosteus_oculatus
ENSGALG00000038884	SRL	96	90.044	ENSLAFG00000006329	SRL	51	90.044	Loxodonta_africana
ENSGALG00000038884	SRL	91	92.075	ENSMFAG00000037383	SRL	99	92.075	Macaca_fascicularis
ENSGALG00000038884	SRL	97	89.716	ENSMNEG00000019236	-	97	89.716	Macaca_nemestrina
ENSGALG00000038884	SRL	96	82.781	ENSMLEG00000032156	SRL	99	81.780	Mandrillus_leucophaeus
ENSGALG00000038884	SRL	98	80.778	ENSMAMG00000023322	srl	98	80.778	Mastacembelus_armatus
ENSGALG00000038884	SRL	94	73.856	ENSMAMG00000013756	SRL	69	59.874	Mastacembelus_armatus
ENSGALG00000038884	SRL	93	73.510	ENSMZEG00005004010	SRL	57	73.510	Maylandia_zebra
ENSGALG00000038884	SRL	98	81.857	ENSMZEG00005004548	srl	96	83.864	Maylandia_zebra
ENSGALG00000038884	SRL	100	95.763	ENSMGAG00000009342	SRL	99	95.443	Meleagris_gallopavo
ENSGALG00000038884	SRL	96	91.150	ENSMICG00000032307	SRL	99	90.578	Microcebus_murinus
ENSGALG00000038884	SRL	99	88.535	ENSMOCG00000008208	Srl	99	88.535	Microtus_ochrogaster
ENSGALG00000038884	SRL	94	71.554	ENSMMOG00000021572	SRL	99	71.772	Mola_mola
ENSGALG00000038884	SRL	95	82.366	ENSMMOG00000013970	srl	99	82.366	Mola_mola
ENSGALG00000038884	SRL	96	91.814	ENSMODG00000016380	-	51	91.814	Monodelphis_domestica
ENSGALG00000038884	SRL	88	76.627	ENSMALG00000000670	SRL	97	76.627	Monopterus_albus
ENSGALG00000038884	SRL	96	82.599	ENSMALG00000005039	srl	98	83.521	Monopterus_albus
ENSGALG00000038884	SRL	96	91.372	MGP_CAROLIEiJ_G0020400	Srl	99	90.254	Mus_caroli
ENSGALG00000038884	SRL	96	91.372	ENSMUSG00000022519	Srl	99	90.254	Mus_musculus
ENSGALG00000038884	SRL	93	91.818	MGP_PahariEiJ_G0016108	Srl	69	69.367	Mus_pahari
ENSGALG00000038884	SRL	96	91.372	MGP_SPRETEiJ_G0021294	Srl	99	90.254	Mus_spretus
ENSGALG00000038884	SRL	96	90.549	ENSMPUG00000015025	SRL	55	90.549	Mustela_putorius_furo
ENSGALG00000038884	SRL	96	91.170	ENSMLUG00000030733	SRL	57	91.170	Myotis_lucifugus
ENSGALG00000038884	SRL	96	89.427	ENSNGAG00000019741	Srl	99	88.747	Nannospalax_galili
ENSGALG00000038884	SRL	98	81.641	ENSNBRG00000023775	srl	98	81.641	Neolamprologus_brichardi
ENSGALG00000038884	SRL	93	73.068	ENSNBRG00000002422	SRL	70	62.000	Neolamprologus_brichardi
ENSGALG00000038884	SRL	96	83.736	ENSNLEG00000029051	SRL	99	82.627	Nomascus_leucogenys
ENSGALG00000038884	SRL	96	84.513	ENSOPRG00000000477	-	53	84.513	Ochotona_princeps
ENSGALG00000038884	SRL	95	90.909	ENSODEG00000013256	SRL	99	89.619	Octodon_degus
ENSGALG00000038884	SRL	99	80.892	ENSONIG00000005192	srl	99	80.892	Oreochromis_niloticus
ENSGALG00000038884	SRL	96	90.929	ENSOCUG00000025140	SRL	50	90.929	Oryctolagus_cuniculus
ENSGALG00000038884	SRL	99	80.679	ENSORLG00000008291	srl	93	85.969	Oryzias_latipes
ENSGALG00000038884	SRL	95	74.273	ENSORLG00000015064	SRL	98	74.273	Oryzias_latipes
ENSGALG00000038884	SRL	99	80.255	ENSORLG00020019784	srl	80	85.459	Oryzias_latipes_hni
ENSGALG00000038884	SRL	95	74.497	ENSORLG00020018173	SRL	98	74.497	Oryzias_latipes_hni
ENSGALG00000038884	SRL	99	79.830	ENSORLG00015009342	srl	97	79.830	Oryzias_latipes_hsok
ENSGALG00000038884	SRL	95	74.720	ENSORLG00015019063	SRL	98	74.720	Oryzias_latipes_hsok
ENSGALG00000038884	SRL	95	72.174	ENSOMEG00000005682	SRL	53	72.391	Oryzias_melastigma
ENSGALG00000038884	SRL	99	80.255	ENSOMEG00000010006	srl	99	82.472	Oryzias_melastigma
ENSGALG00000038884	SRL	96	91.150	ENSOGAG00000029266	SRL	55	91.150	Otolemur_garnettii
ENSGALG00000038884	SRL	99	89.293	ENSOARG00000003074	SRL	88	63.722	Ovis_aries
ENSGALG00000038884	SRL	96	90.487	ENSPPAG00000024919	-	99	92.075	Pan_paniscus
ENSGALG00000038884	SRL	99	89.407	ENSPPRG00000010274	SRL	99	92.774	Panthera_pardus
ENSGALG00000038884	SRL	99	89.407	ENSPTIG00000015162	SRL	99	92.774	Panthera_tigris_altaica
ENSGALG00000038884	SRL	96	90.487	ENSPTRG00000007712	SRL	99	92.075	Pan_troglodytes
ENSGALG00000038884	SRL	97	89.934	ENSPANG00000013804	SRL	98	89.934	Papio_anubis
ENSGALG00000038884	SRL	99	74.098	ENSPKIG00000024974	SRL	94	74.098	Paramormyrops_kingsleyae
ENSGALG00000038884	SRL	98	81.935	ENSPKIG00000006405	srl	98	81.935	Paramormyrops_kingsleyae
ENSGALG00000038884	SRL	96	93.142	ENSPSIG00000008586	SRL	51	93.142	Pelodiscus_sinensis
ENSGALG00000038884	SRL	95	82.444	ENSPMGG00000021081	srl	97	82.444	Periophthalmus_magnuspinnatus
ENSGALG00000038884	SRL	93	72.727	ENSPMGG00000023505	-	99	72.727	Periophthalmus_magnuspinnatus
ENSGALG00000038884	SRL	96	89.427	ENSPEMG00000015842	Srl	99	88.960	Peromyscus_maniculatus_bairdii
ENSGALG00000038884	SRL	89	68.879	ENSPMAG00000004786	srl	100	69.635	Petromyzon_marinus
ENSGALG00000038884	SRL	96	91.593	ENSPCIG00000012128	SRL	99	91.593	Phascolarctos_cinereus
ENSGALG00000038884	SRL	99	79.089	ENSPFOG00000011408	srl	95	82.013	Poecilia_formosa
ENSGALG00000038884	SRL	93	75.455	ENSPLAG00000002932	SRL	98	75.455	Poecilia_latipinna
ENSGALG00000038884	SRL	97	81.878	ENSPLAG00000008017	srl	99	81.878	Poecilia_latipinna
ENSGALG00000038884	SRL	99	80.892	ENSPMEG00000006745	srl	99	81.878	Poecilia_mexicana
ENSGALG00000038884	SRL	93	73.510	ENSPMEG00000005890	SRL	59	73.951	Poecilia_mexicana
ENSGALG00000038884	SRL	99	80.679	ENSPREG00000007751	srl	98	83.636	Poecilia_reticulata
ENSGALG00000038884	SRL	95	75.670	ENSPREG00000000315	SRL	99	75.670	Poecilia_reticulata
ENSGALG00000038884	SRL	89	92.344	ENSPPYG00000007053	SRL	97	92.344	Pongo_abelii
ENSGALG00000038884	SRL	96	90.728	ENSPCAG00000003378	-	51	90.728	Procavia_capensis
ENSGALG00000038884	SRL	96	90.989	ENSPCOG00000023135	SRL	99	93.007	Propithecus_coquereli
ENSGALG00000038884	SRL	96	90.929	ENSPVAG00000006586	SRL	56	90.929	Pteropus_vampyrus
ENSGALG00000038884	SRL	93	73.510	ENSPNYG00000003423	SRL	56	73.510	Pundamilia_nyererei
ENSGALG00000038884	SRL	98	81.857	ENSPNYG00000001200	srl	96	83.864	Pundamilia_nyererei
ENSGALG00000038884	SRL	98	80.346	ENSPNAG00000023106	srl	98	80.346	Pygocentrus_nattereri
ENSGALG00000038884	SRL	94	74.439	ENSPNAG00000007361	-	92	74.439	Pygocentrus_nattereri
ENSGALG00000038884	SRL	97	90.372	ENSRNOG00000005269	Srl	50	91.372	Rattus_norvegicus
ENSGALG00000038884	SRL	97	89.497	ENSRBIG00000042358	SRL	51	89.497	Rhinopithecus_bieti
ENSGALG00000038884	SRL	93	91.136	ENSSBOG00000029273	SRL	99	88.771	Saimiri_boliviensis_boliviensis
ENSGALG00000038884	SRL	96	91.353	ENSSHAG00000011715	-	51	91.353	Sarcophilus_harrisii
ENSGALG00000038884	SRL	93	76.591	ENSSFOG00015021327	SRL	69	59.542	Scleropages_formosus
ENSGALG00000038884	SRL	98	80.922	ENSSFOG00015009773	srl	97	83.114	Scleropages_formosus
ENSGALG00000038884	SRL	99	79.618	ENSSMAG00000016274	srl	99	79.618	Scophthalmus_maximus
ENSGALG00000038884	SRL	93	72.026	ENSSMAG00000002232	SRL	50	72.247	Scophthalmus_maximus
ENSGALG00000038884	SRL	93	84.091	ENSSDUG00000010808	srl	97	84.091	Seriola_dumerili
ENSGALG00000038884	SRL	95	74.066	ENSSDUG00000009161	SRL	99	74.066	Seriola_dumerili
ENSGALG00000038884	SRL	96	82.599	ENSSLDG00000022024	srl	99	81.104	Seriola_lalandi_dorsalis
ENSGALG00000038884	SRL	93	74.393	ENSSLDG00000014601	SRL	99	74.614	Seriola_lalandi_dorsalis
ENSGALG00000038884	SRL	96	93.363	ENSSPUG00000016859	SRL	99	93.363	Sphenodon_punctatus
ENSGALG00000038884	SRL	99	80.892	ENSSPAG00000019105	srl	99	80.892	Stegastes_partitus
ENSGALG00000038884	SRL	95	75.615	ENSSPAG00000014254	SRL	99	75.615	Stegastes_partitus
ENSGALG00000038884	SRL	96	89.912	ENSSSCG00000007949	SRL	99	90.157	Sus_scrofa
ENSGALG00000038884	SRL	96	97.566	ENSTGUG00000003951	-	99	97.566	Taeniopygia_guttata
ENSGALG00000038884	SRL	77	96.961	ENSTGUG00000016121	-	100	96.961	Taeniopygia_guttata
ENSGALG00000038884	SRL	89	74.463	ENSTRUG00000013310	SRL	55	74.463	Takifugu_rubripes
ENSGALG00000038884	SRL	99	80.679	ENSTRUG00000006005	srl	99	80.679	Takifugu_rubripes
ENSGALG00000038884	SRL	96	81.938	ENSTNIG00000009739	srl	99	80.679	Tetraodon_nigroviridis
ENSGALG00000038884	SRL	96	90.949	ENSUAMG00000005701	SRL	56	90.949	Ursus_americanus
ENSGALG00000038884	SRL	96	90.949	ENSUMAG00000002574	SRL	56	90.949	Ursus_maritimus
ENSGALG00000038884	SRL	96	90.549	ENSVVUG00000016331	-	50	90.549	Vulpes_vulpes
ENSGALG00000038884	SRL	98	87.284	ENSXETG00000017313	srl	99	89.556	Xenopus_tropicalis
ENSGALG00000038884	SRL	89	85.714	ENSXCOG00000010424	srl	96	85.714	Xiphophorus_couchianus
ENSGALG00000038884	SRL	93	76.136	ENSXCOG00000014584	SRL	98	76.136	Xiphophorus_couchianus
ENSGALG00000038884	SRL	93	74.172	ENSXMAG00000027598	SRL	85	58.615	Xiphophorus_maculatus
ENSGALG00000038884	SRL	99	80.892	ENSXMAG00000004625	srl	94	81.641	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	-	IEA	Function
GO:0033018	sarcoplasmic reticulum lumen	-	IEA	Component