EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000039803 (Gene tree)
Gene ID: 776864
Gene Symbol: LSM12
Alias: -
Full Name: Protein LSM12 homolog
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 2849 bases
Position: chr27:5493406-5496254
Accession: Q5ZML5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000043938	AD	PF09793.9	5.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000065412	LSM12-201	462	-	ENSGALP00000043938	153 (aa)	-	Q5ZML5

Gene Model

Click here to download ENSGALG00000039803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000039803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000039803	LSM12	100	94.118	ENSG00000161654	LSM12	78	94.118	Homo_sapiens
ENSGALG00000039803	LSM12	100	86.928	ENSAPOG00000007907	lsm12b	78	86.928	Acanthochromis_polyacanthus
ENSGALG00000039803	LSM12	100	94.118	ENSAMEG00000018321	LSM12	77	94.118	Ailuropoda_melanoleuca
ENSGALG00000039803	LSM12	100	84.967	ENSACIG00000008538	lsm12b	78	84.967	Amphilophus_citrinellus
ENSGALG00000039803	LSM12	100	86.275	ENSAOCG00000021847	lsm12b	68	86.275	Amphiprion_ocellaris
ENSGALG00000039803	LSM12	100	86.275	ENSAPEG00000002252	lsm12b	78	86.275	Amphiprion_percula
ENSGALG00000039803	LSM12	100	85.621	ENSATEG00000005705	lsm12b	78	85.621	Anabas_testudineus
ENSGALG00000039803	LSM12	100	96.732	ENSACAG00000004618	LSM12	79	96.732	Anolis_carolinensis
ENSGALG00000039803	LSM12	100	94.118	ENSANAG00000029011	LSM12	80	92.661	Aotus_nancymaae
ENSGALG00000039803	LSM12	100	85.621	ENSACLG00000026332	lsm12b	78	85.621	Astatotilapia_calliptera
ENSGALG00000039803	LSM12	100	81.046	ENSAMXG00000036117	lsm12a	71	81.046	Astyanax_mexicanus
ENSGALG00000039803	LSM12	100	85.621	ENSAMXG00000032952	lsm12b	78	85.621	Astyanax_mexicanus
ENSGALG00000039803	LSM12	100	94.118	ENSBTAG00000016252	LSM12	78	94.118	Bos_taurus
ENSGALG00000039803	LSM12	100	94.118	ENSCJAG00000048480	LSM12	80	92.661	Callithrix_jacchus
ENSGALG00000039803	LSM12	100	94.118	ENSCAFG00000014379	LSM12	72	94.118	Canis_familiaris
ENSGALG00000039803	LSM12	100	94.118	ENSCAFG00020012173	LSM12	78	94.118	Canis_lupus_dingo
ENSGALG00000039803	LSM12	100	94.118	ENSCHIG00000018175	LSM12	78	94.118	Capra_hircus
ENSGALG00000039803	LSM12	100	94.118	ENSTSYG00000036361	LSM12	78	94.118	Carlito_syrichta
ENSGALG00000039803	LSM12	100	94.118	ENSCAPG00000009647	LSM12	84	94.118	Cavia_aperea
ENSGALG00000039803	LSM12	100	94.118	ENSCPOG00000012860	LSM12	80	92.661	Cavia_porcellus
ENSGALG00000039803	LSM12	100	94.118	ENSCCAG00000032905	LSM12	80	92.661	Cebus_capucinus
ENSGALG00000039803	LSM12	100	94.118	ENSCATG00000030577	-	80	92.661	Cercocebus_atys
ENSGALG00000039803	LSM12	100	94.118	ENSCLAG00000015759	LSM12	80	92.661	Chinchilla_lanigera
ENSGALG00000039803	LSM12	100	93.464	ENSCSAG00000003486	LSM12	78	93.464	Chlorocebus_sabaeus
ENSGALG00000039803	LSM12	71	91.743	ENSCHOG00000001198	LSM12	100	91.743	Choloepus_hoffmanni
ENSGALG00000039803	LSM12	100	94.771	ENSCPBG00000027105	LSM12	79	94.771	Chrysemys_picta_bellii
ENSGALG00000039803	LSM12	100	94.118	ENSCANG00000043328	LSM12	80	92.661	Colobus_angolensis_palliatus
ENSGALG00000039803	LSM12	100	94.118	ENSCGRG00001002094	Lsm12	80	92.661	Cricetulus_griseus_chok1gshd
ENSGALG00000039803	LSM12	100	94.118	ENSCGRG00000004316	Lsm12	86	94.118	Cricetulus_griseus_crigri
ENSGALG00000039803	LSM12	100	84.967	ENSCSEG00000008434	lsm12b	78	84.967	Cynoglossus_semilaevis
ENSGALG00000039803	LSM12	100	85.621	ENSCVAG00000008755	lsm12b	78	85.621	Cyprinodon_variegatus
ENSGALG00000039803	LSM12	100	76.471	ENSDARG00000028848	lsm12a	78	76.471	Danio_rerio
ENSGALG00000039803	LSM12	100	86.275	ENSDARG00000109510	lsm12b	78	86.275	Danio_rerio
ENSGALG00000039803	LSM12	100	94.771	ENSDNOG00000002418	LSM12	71	94.771	Dasypus_novemcinctus
ENSGALG00000039803	LSM12	100	94.118	ENSDORG00000016381	Lsm12	80	92.661	Dipodomys_ordii
ENSGALG00000039803	LSM12	100	82.353	ENSETEG00000011012	-	87	82.353	Echinops_telfairi
ENSGALG00000039803	LSM12	100	93.464	ENSETEG00000008374	LSM12	78	93.464	Echinops_telfairi
ENSGALG00000039803	LSM12	84	60.156	ENSEBUG00000016299	lsm12a	72	60.156	Eptatretus_burgeri
ENSGALG00000039803	LSM12	100	94.118	ENSEASG00005010155	LSM12	78	94.118	Equus_asinus_asinus
ENSGALG00000039803	LSM12	100	94.118	ENSECAG00000009071	LSM12	80	92.661	Equus_caballus
ENSGALG00000039803	LSM12	100	94.118	ENSEEUG00000002419	-	100	94.118	Erinaceus_europaeus
ENSGALG00000039803	LSM12	100	84.314	ENSELUG00000015538	lsm12b	72	84.314	Esox_lucius
ENSGALG00000039803	LSM12	100	83.007	ENSELUG00000000256	-	78	83.007	Esox_lucius
ENSGALG00000039803	LSM12	100	94.118	ENSFCAG00000037021	LSM12	78	94.118	Felis_catus
ENSGALG00000039803	LSM12	97	93.919	ENSFDAG00000008954	LSM12	87	93.919	Fukomys_damarensis
ENSGALG00000039803	LSM12	100	84.314	ENSFHEG00000019913	lsm12b	78	84.314	Fundulus_heteroclitus
ENSGALG00000039803	LSM12	100	84.967	ENSGMOG00000015449	lsm12b	97	84.967	Gadus_morhua
ENSGALG00000039803	LSM12	100	84.967	ENSGAFG00000011829	lsm12b	78	84.967	Gambusia_affinis
ENSGALG00000039803	LSM12	100	86.275	ENSGACG00000003428	lsm12b	97	86.275	Gasterosteus_aculeatus
ENSGALG00000039803	LSM12	100	96.078	ENSGAGG00000021965	LSM12	79	96.078	Gopherus_agassizii
ENSGALG00000039803	LSM12	100	94.118	ENSGGOG00000010589	-	80	92.661	Gorilla_gorilla
ENSGALG00000039803	LSM12	100	85.621	ENSHBUG00000007667	lsm12b	68	85.621	Haplochromis_burtoni
ENSGALG00000039803	LSM12	100	94.118	ENSHGLG00000011411	LSM12	80	92.661	Heterocephalus_glaber_female
ENSGALG00000039803	LSM12	100	94.118	ENSHGLG00100000241	LSM12	81	94.118	Heterocephalus_glaber_male
ENSGALG00000039803	LSM12	100	84.314	ENSHCOG00000002094	lsm12b	78	84.314	Hippocampus_comes
ENSGALG00000039803	LSM12	100	86.275	ENSIPUG00000014800	lsm12	78	86.275	Ictalurus_punctatus
ENSGALG00000039803	LSM12	99	76.159	ENSIPUG00000008936	lsm12a	77	76.159	Ictalurus_punctatus
ENSGALG00000039803	LSM12	100	94.118	ENSSTOG00000007403	LSM12	80	92.661	Ictidomys_tridecemlineatus
ENSGALG00000039803	LSM12	100	92.810	ENSJJAG00000004364	-	80	91.743	Jaculus_jaculus
ENSGALG00000039803	LSM12	81	82.258	ENSJJAG00000014652	-	73	82.258	Jaculus_jaculus
ENSGALG00000039803	LSM12	100	82.468	ENSJJAG00000011793	-	80	82.468	Jaculus_jaculus
ENSGALG00000039803	LSM12	100	86.275	ENSLBEG00000027999	lsm12b	78	86.275	Labrus_bergylta
ENSGALG00000039803	LSM12	99	90.789	ENSLACG00000015981	LSM12	78	90.789	Latimeria_chalumnae
ENSGALG00000039803	LSM12	100	85.621	ENSLOCG00000013079	lsm12b	78	85.621	Lepisosteus_oculatus
ENSGALG00000039803	LSM12	100	94.118	ENSLAFG00000005202	LSM12	78	94.118	Loxodonta_africana
ENSGALG00000039803	LSM12	100	94.118	ENSMFAG00000031376	LSM12	80	92.661	Macaca_fascicularis
ENSGALG00000039803	LSM12	100	94.118	ENSMMUG00000006804	LSM12	80	92.661	Macaca_mulatta
ENSGALG00000039803	LSM12	57	79.310	ENSMMUG00000042106	-	79	79.310	Macaca_mulatta
ENSGALG00000039803	LSM12	57	79.310	ENSMMUG00000038408	-	79	79.310	Macaca_mulatta
ENSGALG00000039803	LSM12	100	94.118	ENSMNEG00000030594	-	80	92.661	Macaca_nemestrina
ENSGALG00000039803	LSM12	100	94.118	ENSMLEG00000039934	LSM12	80	92.661	Mandrillus_leucophaeus
ENSGALG00000039803	LSM12	100	85.621	ENSMAMG00000004279	lsm12b	78	85.621	Mastacembelus_armatus
ENSGALG00000039803	LSM12	100	85.621	ENSMZEG00005005754	lsm12b	78	85.621	Maylandia_zebra
ENSGALG00000039803	LSM12	100	93.464	ENSMICG00000037219	LSM12	80	91.743	Microcebus_murinus
ENSGALG00000039803	LSM12	100	94.118	ENSMOCG00000019878	-	80	92.661	Microtus_ochrogaster
ENSGALG00000039803	LSM12	100	77.124	ENSMOCG00000017015	-	67	77.124	Microtus_ochrogaster
ENSGALG00000039803	LSM12	100	85.621	ENSMMOG00000020848	lsm12b	78	85.621	Mola_mola
ENSGALG00000039803	LSM12	100	86.275	ENSMALG00000007578	lsm12b	78	86.275	Monopterus_albus
ENSGALG00000039803	LSM12	100	93.464	MGP_CAROLIEiJ_G0017241	Lsm12	80	91.743	Mus_caroli
ENSGALG00000039803	LSM12	100	94.118	ENSMUSG00000020922	Lsm12	80	92.661	Mus_musculus
ENSGALG00000039803	LSM12	100	84.706	MGP_PahariEiJ_G0018371	Lsm12	80	92.661	Mus_pahari
ENSGALG00000039803	LSM12	100	93.464	MGP_SPRETEiJ_G0018084	Lsm12	79	92.593	Mus_spretus
ENSGALG00000039803	LSM12	100	93.464	ENSMLUG00000006391	LSM12	78	93.464	Myotis_lucifugus
ENSGALG00000039803	LSM12	99	69.536	ENSNGAG00000015429	-	77	69.536	Nannospalax_galili
ENSGALG00000039803	LSM12	100	94.118	ENSNGAG00000001870	Lsm12	80	92.661	Nannospalax_galili
ENSGALG00000039803	LSM12	100	85.621	ENSNBRG00000006266	lsm12b	78	85.621	Neolamprologus_brichardi
ENSGALG00000039803	LSM12	100	94.118	ENSNLEG00000005580	-	80	92.661	Nomascus_leucogenys
ENSGALG00000039803	LSM12	80	95.122	ENSMEUG00000007501	-	75	95.122	Notamacropus_eugenii
ENSGALG00000039803	LSM12	100	94.118	ENSOPRG00000008552	LSM12	78	94.118	Ochotona_princeps
ENSGALG00000039803	LSM12	100	83.660	ENSODEG00000007886	-	59	83.660	Octodon_degus
ENSGALG00000039803	LSM12	100	94.118	ENSODEG00000017998	-	80	92.661	Octodon_degus
ENSGALG00000039803	LSM12	100	85.621	ENSONIG00000007933	lsm12b	78	85.621	Oreochromis_niloticus
ENSGALG00000039803	LSM12	53	88.889	ENSOANG00000031724	-	100	88.889	Ornithorhynchus_anatinus
ENSGALG00000039803	LSM12	99	86.184	ENSOCUG00000024823	-	78	86.184	Oryctolagus_cuniculus
ENSGALG00000039803	LSM12	99	87.500	ENSOCUG00000021254	-	78	87.500	Oryctolagus_cuniculus
ENSGALG00000039803	LSM12	99	90.132	ENSOCUG00000027889	-	78	90.132	Oryctolagus_cuniculus
ENSGALG00000039803	LSM12	100	94.118	ENSOCUG00000008566	-	77	94.118	Oryctolagus_cuniculus
ENSGALG00000039803	LSM12	100	85.621	ENSORLG00000011310	lsm12b	78	85.621	Oryzias_latipes
ENSGALG00000039803	LSM12	100	85.621	ENSORLG00020002060	lsm12b	72	85.621	Oryzias_latipes_hni
ENSGALG00000039803	LSM12	100	85.621	ENSORLG00015001647	lsm12b	72	85.621	Oryzias_latipes_hsok
ENSGALG00000039803	LSM12	100	85.621	ENSOMEG00000006184	lsm12b	71	85.621	Oryzias_melastigma
ENSGALG00000039803	LSM12	100	93.464	ENSOGAG00000010489	LSM12	78	93.464	Otolemur_garnettii
ENSGALG00000039803	LSM12	100	94.118	ENSOARG00000006589	LSM12	76	94.118	Ovis_aries
ENSGALG00000039803	LSM12	100	94.118	ENSPPAG00000034974	-	83	94.118	Pan_paniscus
ENSGALG00000039803	LSM12	100	94.118	ENSPPRG00000023420	LSM12	78	94.118	Panthera_pardus
ENSGALG00000039803	LSM12	100	94.118	ENSPTIG00000012704	-	82	94.118	Panthera_tigris_altaica
ENSGALG00000039803	LSM12	73	89.189	ENSPTIG00000014850	-	81	89.189	Panthera_tigris_altaica
ENSGALG00000039803	LSM12	100	94.118	ENSPTRG00000009261	LSM12	80	92.661	Pan_troglodytes
ENSGALG00000039803	LSM12	100	94.118	ENSPANG00000021315	-	80	92.661	Papio_anubis
ENSGALG00000039803	LSM12	100	74.510	ENSPKIG00000017932	-	78	74.510	Paramormyrops_kingsleyae
ENSGALG00000039803	LSM12	100	86.928	ENSPKIG00000021058	lsm12b	78	86.928	Paramormyrops_kingsleyae
ENSGALG00000039803	LSM12	100	85.621	ENSPMGG00000021344	lsm12b	78	85.621	Periophthalmus_magnuspinnatus
ENSGALG00000039803	LSM12	100	94.118	ENSPEMG00000012199	Lsm12	80	92.661	Peromyscus_maniculatus_bairdii
ENSGALG00000039803	LSM12	86	65.152	ENSPMAG00000005461	lsm12a	76	65.152	Petromyzon_marinus
ENSGALG00000039803	LSM12	100	95.425	ENSPCIG00000020244	LSM12	78	95.425	Phascolarctos_cinereus
ENSGALG00000039803	LSM12	100	83.660	ENSPFOG00000015930	lsm12b	78	83.660	Poecilia_formosa
ENSGALG00000039803	LSM12	100	83.660	ENSPLAG00000021089	lsm12b	78	83.660	Poecilia_latipinna
ENSGALG00000039803	LSM12	100	83.660	ENSPMEG00000012961	lsm12b	78	83.660	Poecilia_mexicana
ENSGALG00000039803	LSM12	100	84.967	ENSPREG00000010236	lsm12b	85	84.967	Poecilia_reticulata
ENSGALG00000039803	LSM12	100	94.118	ENSPPYG00000008344	LSM12	78	94.118	Pongo_abelii
ENSGALG00000039803	LSM12	80	95.935	ENSPCAG00000008790	LSM12	77	95.935	Procavia_capensis
ENSGALG00000039803	LSM12	100	94.118	ENSPCOG00000027951	LSM12	80	92.661	Propithecus_coquereli
ENSGALG00000039803	LSM12	100	93.464	ENSPVAG00000013706	LSM12	78	93.464	Pteropus_vampyrus
ENSGALG00000039803	LSM12	100	85.621	ENSPNYG00000003386	lsm12b	78	85.621	Pundamilia_nyererei
ENSGALG00000039803	LSM12	100	84.967	ENSPNAG00000004186	lsm12b	78	84.967	Pygocentrus_nattereri
ENSGALG00000039803	LSM12	100	80.392	ENSPNAG00000018435	lsm12a	78	80.392	Pygocentrus_nattereri
ENSGALG00000039803	LSM12	100	94.118	ENSRNOG00000020894	Lsm12	78	94.118	Rattus_norvegicus
ENSGALG00000039803	LSM12	100	94.118	ENSRBIG00000027910	LSM12	80	92.661	Rhinopithecus_bieti
ENSGALG00000039803	LSM12	100	94.118	ENSRROG00000045530	-	80	92.661	Rhinopithecus_roxellana
ENSGALG00000039803	LSM12	76	77.586	ENSRROG00000000537	-	80	77.586	Rhinopithecus_roxellana
ENSGALG00000039803	LSM12	74	31.746	YHR121W	-	65	31.746	Saccharomyces_cerevisiae
ENSGALG00000039803	LSM12	100	94.118	ENSSBOG00000025310	LSM12	80	92.661	Saimiri_boliviensis_boliviensis
ENSGALG00000039803	LSM12	100	95.425	ENSSHAG00000014914	LSM12	97	95.425	Sarcophilus_harrisii
ENSGALG00000039803	LSM12	100	86.928	ENSSFOG00015009612	lsm12	78	86.928	Scleropages_formosus
ENSGALG00000039803	LSM12	100	82.353	ENSSFOG00015020392	lsm12a	78	82.353	Scleropages_formosus
ENSGALG00000039803	LSM12	100	86.275	ENSSMAG00000008089	lsm12b	78	86.275	Scophthalmus_maximus
ENSGALG00000039803	LSM12	100	86.928	ENSSDUG00000012711	lsm12b	78	86.928	Seriola_dumerili
ENSGALG00000039803	LSM12	100	86.928	ENSSLDG00000007404	lsm12b	78	86.928	Seriola_lalandi_dorsalis
ENSGALG00000039803	LSM12	100	93.464	ENSSARG00000005537	LSM12	100	93.464	Sorex_araneus
ENSGALG00000039803	LSM12	100	97.386	ENSSPUG00000011984	LSM12	79	97.386	Sphenodon_punctatus
ENSGALG00000039803	LSM12	100	86.275	ENSSPAG00000017058	lsm12b	78	86.275	Stegastes_partitus
ENSGALG00000039803	LSM12	100	94.118	ENSSSCG00000032394	LSM12	78	94.118	Sus_scrofa
ENSGALG00000039803	LSM12	100	84.967	ENSTRUG00000007121	lsm12b	78	84.967	Takifugu_rubripes
ENSGALG00000039803	LSM12	100	84.967	ENSTNIG00000014436	lsm12b	78	84.967	Tetraodon_nigroviridis
ENSGALG00000039803	LSM12	100	89.542	ENSTBEG00000012392	-	78	89.542	Tupaia_belangeri
ENSGALG00000039803	LSM12	100	93.464	ENSTBEG00000012523	-	78	93.464	Tupaia_belangeri
ENSGALG00000039803	LSM12	100	94.118	ENSTTRG00000010433	LSM12	78	94.118	Tursiops_truncatus
ENSGALG00000039803	LSM12	100	94.118	ENSUAMG00000006313	LSM12	95	94.118	Ursus_americanus
ENSGALG00000039803	LSM12	100	94.118	ENSUMAG00000012987	LSM12	87	94.118	Ursus_maritimus
ENSGALG00000039803	LSM12	100	86.928	ENSVPAG00000011145	LSM12	78	86.928	Vicugna_pacos
ENSGALG00000039803	LSM12	100	94.118	ENSVVUG00000017581	LSM12	78	94.118	Vulpes_vulpes
ENSGALG00000039803	LSM12	95	65.068	ENSXETG00000003371	lsm12	72	65.068	Xenopus_tropicalis
ENSGALG00000039803	LSM12	100	84.967	ENSXCOG00000003994	lsm12b	78	84.967	Xiphophorus_couchianus
ENSGALG00000039803	LSM12	100	84.967	ENSXMAG00000020950	lsm12b	78	84.967	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0016070	RNA metabolic process	21873635.	IBA	Process