EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000040109 (Gene tree)
Gene ID: 416258
Gene Symbol: LARP1
Alias: KIAA0731|LARP|MGC19556
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 39512 bases
Position: chr13:12764337-12803848
Accession: 29531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000073649	La	PF05383.17	2.4e-21	1	1
ENSGALP00000051703	La	PF05383.17	2.8e-21	1	1
ENSGALP00000069827	La	PF05383.17	2.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000101187	LARP1-201	723	-	ENSGALP00000072645	240 (aa)	-	-
ENSGALT00000096842	LARP1-202	426	-	ENSGALP00000065226	141 (aa)	-	-
ENSGALT00000108329	LARP1-204	3141	-	ENSGALP00000069827	1046 (aa)	-	-
ENSGALT00000099556	LARP1-203	2720	-	ENSGALP00000067719	688 (aa)	-	-
ENSGALT00000099434	LARP1-206	2856	-	ENSGALP00000073649	951 (aa)	-	-
ENSGALT00000059160	LARP1-205	3132	-	ENSGALP00000051703	1043 (aa)	-	A0A1D5PFY6

Gene Model

Click here to download ENSGALG00000040109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000040109's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000040109	LARP1	95	79.396	ENSG00000155506	LARP1	89	93.210	Homo_sapiens
ENSGALG00000040109	LARP1	87	85.714	ENSAPOG00000020685	larp1	98	86.047	Acanthochromis_polyacanthus
ENSGALG00000040109	LARP1	95	79.626	ENSAMEG00000016673	LARP1	100	81.894	Ailuropoda_melanoleuca
ENSGALG00000040109	LARP1	97	69.002	ENSACIG00000012994	larp1	99	62.884	Amphilophus_citrinellus
ENSGALG00000040109	LARP1	83	72.005	ENSAOCG00000007792	larp1	98	73.647	Amphiprion_ocellaris
ENSGALG00000040109	LARP1	99	68.929	ENSAPEG00000022246	larp1	99	68.451	Amphiprion_percula
ENSGALG00000040109	LARP1	95	71.338	ENSATEG00000013523	larp1	99	67.754	Anabas_testudineus
ENSGALG00000040109	LARP1	83	96.587	ENSAPLG00000007559	LARP1	99	96.587	Anas_platyrhynchos
ENSGALG00000040109	LARP1	95	84.734	ENSACAG00000004071	LARP1	100	88.976	Anolis_carolinensis
ENSGALG00000040109	LARP1	95	79.396	ENSANAG00000029949	LARP1	100	79.024	Aotus_nancymaae
ENSGALG00000040109	LARP1	97	71.575	ENSACLG00000015256	larp1	99	70.041	Astatotilapia_calliptera
ENSGALG00000040109	LARP1	96	74.153	ENSAMXG00000000859	larp1	99	69.614	Astyanax_mexicanus
ENSGALG00000040109	LARP1	100	77.112	ENSBTAG00000008443	LARP1	100	77.657	Bos_taurus
ENSGALG00000040109	LARP1	100	77.132	ENSCJAG00000004454	LARP1	100	77.223	Callithrix_jacchus
ENSGALG00000040109	LARP1	95	79.771	ENSCAFG00000017639	LARP1	99	81.837	Canis_familiaris
ENSGALG00000040109	LARP1	90	80.778	ENSCAFG00020023860	LARP1	100	82.091	Canis_lupus_dingo
ENSGALG00000040109	LARP1	100	77.604	ENSCHIG00000014414	LARP1	100	77.778	Capra_hircus
ENSGALG00000040109	LARP1	98	77.403	ENSTSYG00000013732	LARP1	99	79.895	Carlito_syrichta
ENSGALG00000040109	LARP1	83	80.964	ENSCAPG00000013865	LARP1	86	82.088	Cavia_aperea
ENSGALG00000040109	LARP1	95	79.979	ENSCPOG00000003377	LARP1	100	82.359	Cavia_porcellus
ENSGALG00000040109	LARP1	100	77.314	ENSCCAG00000025201	LARP1	100	76.951	Cebus_capucinus
ENSGALG00000040109	LARP1	97	77.868	ENSCATG00000030675	LARP1	98	78.628	Cercocebus_atys
ENSGALG00000040109	LARP1	95	79.855	ENSCLAG00000012755	LARP1	99	80.711	Chinchilla_lanigera
ENSGALG00000040109	LARP1	90	77.790	ENSCSAG00000010800	LARP1	100	78.883	Chlorocebus_sabaeus
ENSGALG00000040109	LARP1	89	74.487	ENSCHOG00000012716	LARP1	91	76.696	Choloepus_hoffmanni
ENSGALG00000040109	LARP1	97	90.944	ENSCPBG00000002173	LARP1	94	93.441	Chrysemys_picta_bellii
ENSGALG00000040109	LARP1	95	79.292	ENSCANG00000037418	LARP1	98	78.728	Colobus_angolensis_palliatus
ENSGALG00000040109	LARP1	100	77.757	ENSCGRG00001016913	Larp1	100	77.757	Cricetulus_griseus_chok1gshd
ENSGALG00000040109	LARP1	90	77.140	ENSCGRG00000009916	Larp1	99	80.044	Cricetulus_griseus_crigri
ENSGALG00000040109	LARP1	94	72.632	ENSCSEG00000016431	larp1	99	66.944	Cynoglossus_semilaevis
ENSGALG00000040109	LARP1	95	73.145	ENSCVAG00000022687	larp1	96	69.376	Cyprinodon_variegatus
ENSGALG00000040109	LARP1	99	66.769	ENSDARG00000101722	larp1	97	67.647	Danio_rerio
ENSGALG00000040109	LARP1	100	76.923	ENSDNOG00000012073	LARP1	100	77.055	Dasypus_novemcinctus
ENSGALG00000040109	LARP1	95	76.514	ENSDORG00000002897	Larp1	99	79.310	Dipodomys_ordii
ENSGALG00000040109	LARP1	87	81.725	ENSETEG00000020251	LARP1	100	83.995	Echinops_telfairi
ENSGALG00000040109	LARP1	97	79.352	ENSEASG00005001070	LARP1	100	76.833	Equus_asinus_asinus
ENSGALG00000040109	LARP1	97	79.352	ENSECAG00000017002	LARP1	78	78.703	Equus_caballus
ENSGALG00000040109	LARP1	93	76.013	ENSEEUG00000001065	LARP1	100	77.790	Erinaceus_europaeus
ENSGALG00000040109	LARP1	99	68.169	ENSELUG00000019403	larp1	99	68.199	Esox_lucius
ENSGALG00000040109	LARP1	97	79.656	ENSFCAG00000000592	LARP1	100	77.034	Felis_catus
ENSGALG00000040109	LARP1	84	94.614	ENSFALG00000008335	LARP1	100	96.944	Ficedula_albicollis
ENSGALG00000040109	LARP1	95	79.854	ENSFDAG00000021125	LARP1	100	82.027	Fukomys_damarensis
ENSGALG00000040109	LARP1	62	59.763	ENSFHEG00000020307	larp1	92	69.375	Fundulus_heteroclitus
ENSGALG00000040109	LARP1	100	86.854	ENSGAGG00000025113	LARP1	99	93.138	Gopherus_agassizii
ENSGALG00000040109	LARP1	95	79.353	ENSGGOG00000006048	LARP1	93	81.315	Gorilla_gorilla
ENSGALG00000040109	LARP1	97	72.148	ENSHBUG00000020762	larp1	98	73.185	Haplochromis_burtoni
ENSGALG00000040109	LARP1	100	76.965	ENSHGLG00000006267	LARP1	100	76.895	Heterocephalus_glaber_female
ENSGALG00000040109	LARP1	95	79.771	ENSHGLG00100014230	-	100	82.359	Heterocephalus_glaber_male
ENSGALG00000040109	LARP1	99	64.800	ENSHGLG00100003395	-	91	67.788	Heterocephalus_glaber_male
ENSGALG00000040109	LARP1	90	84.518	ENSHCOG00000010786	larp1	97	84.518	Hippocampus_comes
ENSGALG00000040109	LARP1	96	71.354	ENSIPUG00000019105	Larp1	98	71.354	Ictalurus_punctatus
ENSGALG00000040109	LARP1	95	77.244	ENSSTOG00000005678	LARP1	99	79.519	Ictidomys_tridecemlineatus
ENSGALG00000040109	LARP1	100	73.767	ENSJJAG00000016950	Larp1	100	73.581	Jaculus_jaculus
ENSGALG00000040109	LARP1	97	69.677	ENSKMAG00000018468	larp1	96	70.907	Kryptolebias_marmoratus
ENSGALG00000040109	LARP1	96	70.693	ENSLBEG00000027172	larp1	99	67.011	Labrus_bergylta
ENSGALG00000040109	LARP1	93	75.433	ENSLOCG00000012457	larp1	99	75.770	Lepisosteus_oculatus
ENSGALG00000040109	LARP1	100	76.888	ENSLAFG00000008991	LARP1	100	77.072	Loxodonta_africana
ENSGALG00000040109	LARP1	97	77.563	ENSMFAG00000031651	LARP1	98	78.330	Macaca_fascicularis
ENSGALG00000040109	LARP1	95	76.489	ENSMMUG00000009411	LARP1	99	78.347	Macaca_mulatta
ENSGALG00000040109	LARP1	90	80.067	ENSMNEG00000039294	LARP1	100	81.159	Macaca_nemestrina
ENSGALG00000040109	LARP1	97	77.970	ENSMLEG00000035142	LARP1	98	78.728	Mandrillus_leucophaeus
ENSGALG00000040109	LARP1	97	73.048	ENSMAMG00000021788	larp1	99	67.769	Mastacembelus_armatus
ENSGALG00000040109	LARP1	97	71.575	ENSMZEG00005009345	larp1	99	70.041	Maylandia_zebra
ENSGALG00000040109	LARP1	95	94.439	ENSMGAG00000005696	LARP1	100	98.075	Meleagris_gallopavo
ENSGALG00000040109	LARP1	100	77.665	ENSMAUG00000001385	Larp1	100	77.665	Mesocricetus_auratus
ENSGALG00000040109	LARP1	95	78.810	ENSMICG00000000837	LARP1	99	82.497	Microcebus_murinus
ENSGALG00000040109	LARP1	100	77.850	ENSMOCG00000008920	Larp1	100	77.850	Microtus_ochrogaster
ENSGALG00000040109	LARP1	94	52.999	ENSMMOG00000013364	larp1	95	56.028	Mola_mola
ENSGALG00000040109	LARP1	95	82.075	ENSMODG00000008663	LARP1	99	84.365	Monodelphis_domestica
ENSGALG00000040109	LARP1	99	67.857	ENSMALG00000017180	larp1	95	72.260	Monopterus_albus
ENSGALG00000040109	LARP1	100	77.602	MGP_CAROLIEiJ_G0016383	Larp1	100	77.943	Mus_caroli
ENSGALG00000040109	LARP1	99	78.216	ENSMUSG00000037331	Larp1	99	78.558	Mus_musculus
ENSGALG00000040109	LARP1	100	77.294	MGP_PahariEiJ_G0017518	Larp1	100	77.726	Mus_pahari
ENSGALG00000040109	LARP1	99	78.216	MGP_SPRETEiJ_G0017225	Larp1	99	78.558	Mus_spretus
ENSGALG00000040109	LARP1	82	76.542	ENSMPUG00000013564	LARP1	99	76.542	Mustela_putorius_furo
ENSGALG00000040109	LARP1	94	76.409	ENSMLUG00000002608	LARP1	99	78.826	Myotis_lucifugus
ENSGALG00000040109	LARP1	95	76.483	ENSNGAG00000001098	Larp1	99	78.216	Nannospalax_galili
ENSGALG00000040109	LARP1	94	73.224	ENSNBRG00000008963	larp1	96	72.425	Neolamprologus_brichardi
ENSGALG00000040109	LARP1	97	75.727	ENSNLEG00000016588	LARP1	99	78.247	Nomascus_leucogenys
ENSGALG00000040109	LARP1	95	76.471	ENSMEUG00000002957	LARP1	100	78.685	Notamacropus_eugenii
ENSGALG00000040109	LARP1	95	79.458	ENSOPRG00000013014	LARP1	100	81.524	Ochotona_princeps
ENSGALG00000040109	LARP1	95	79.666	ENSODEG00000010824	LARP1	100	82.255	Octodon_degus
ENSGALG00000040109	LARP1	97	70.994	ENSONIG00000017308	larp1	99	67.369	Oreochromis_niloticus
ENSGALG00000040109	LARP1	95	85.492	ENSOANG00000005096	LARP1	98	88.100	Ornithorhynchus_anatinus
ENSGALG00000040109	LARP1	100	79.098	ENSOCUG00000013066	LARP1	100	79.190	Oryctolagus_cuniculus
ENSGALG00000040109	LARP1	97	69.430	ENSORLG00000000824	larp1	99	74.541	Oryzias_latipes
ENSGALG00000040109	LARP1	99	67.781	ENSORLG00020022241	larp1	99	67.164	Oryzias_latipes_hni
ENSGALG00000040109	LARP1	97	71.266	ENSORLG00015007538	larp1	99	67.072	Oryzias_latipes_hsok
ENSGALG00000040109	LARP1	97	71.577	ENSOMEG00000003134	larp1	99	67.227	Oryzias_melastigma
ENSGALG00000040109	LARP1	95	79.249	ENSOGAG00000016750	LARP1	100	81.211	Otolemur_garnettii
ENSGALG00000040109	LARP1	95	78.056	ENSOARG00000009893	LARP1	99	80.693	Ovis_aries
ENSGALG00000040109	LARP1	95	79.292	ENSPPAG00000042993	LARP1	98	78.628	Pan_paniscus
ENSGALG00000040109	LARP1	97	77.584	ENSPPRG00000009780	LARP1	95	79.816	Panthera_pardus
ENSGALG00000040109	LARP1	98	76.923	ENSPTIG00000007013	LARP1	95	79.816	Panthera_tigris_altaica
ENSGALG00000040109	LARP1	100	74.909	ENSPTRG00000017447	LARP1	98	78.529	Pan_troglodytes
ENSGALG00000040109	LARP1	97	77.868	ENSPANG00000008080	LARP1	98	78.628	Papio_anubis
ENSGALG00000040109	LARP1	95	68.723	ENSPKIG00000017153	-	99	66.097	Paramormyrops_kingsleyae
ENSGALG00000040109	LARP1	97	73.061	ENSPKIG00000010096	larp1	99	68.843	Paramormyrops_kingsleyae
ENSGALG00000040109	LARP1	94	70.706	ENSPMGG00000011599	larp1	98	70.811	Periophthalmus_magnuspinnatus
ENSGALG00000040109	LARP1	95	76.771	ENSPEMG00000022523	Larp1	99	79.079	Peromyscus_maniculatus_bairdii
ENSGALG00000040109	LARP1	98	81.474	ENSPCIG00000019242	LARP1	90	81.569	Phascolarctos_cinereus
ENSGALG00000040109	LARP1	97	66.451	ENSPFOG00000005836	larp1	99	65.162	Poecilia_formosa
ENSGALG00000040109	LARP1	94	70.682	ENSPLAG00000008936	larp1	99	65.963	Poecilia_latipinna
ENSGALG00000040109	LARP1	97	66.667	ENSPMEG00000013656	larp1	99	65.343	Poecilia_mexicana
ENSGALG00000040109	LARP1	91	68.877	ENSPREG00000005726	larp1	97	69.958	Poecilia_reticulata
ENSGALG00000040109	LARP1	95	77.406	ENSPCAG00000006407	LARP1	100	78.870	Procavia_capensis
ENSGALG00000040109	LARP1	95	72.054	ENSPCOG00000016949	LARP1	100	77.035	Propithecus_coquereli
ENSGALG00000040109	LARP1	97	79.049	ENSPVAG00000002262	LARP1	100	76.423	Pteropus_vampyrus
ENSGALG00000040109	LARP1	97	71.779	ENSPNYG00000007938	larp1	99	70.226	Pundamilia_nyererei
ENSGALG00000040109	LARP1	96	72.689	ENSPNAG00000021427	larp1	99	70.182	Pygocentrus_nattereri
ENSGALG00000040109	LARP1	95	77.003	ENSRNOG00000031544	Larp1	99	78.986	Rattus_norvegicus
ENSGALG00000040109	LARP1	95	79.188	ENSRBIG00000038005	LARP1	98	78.429	Rhinopithecus_bieti
ENSGALG00000040109	LARP1	95	79.188	ENSRROG00000034073	LARP1	100	81.271	Rhinopithecus_roxellana
ENSGALG00000040109	LARP1	99	76.954	ENSSBOG00000019816	LARP1	100	79.101	Saimiri_boliviensis_boliviensis
ENSGALG00000040109	LARP1	95	83.738	ENSSHAG00000011115	LARP1	100	86.047	Sarcophilus_harrisii
ENSGALG00000040109	LARP1	94	74.480	ENSSFOG00015018058	-	97	69.912	Scleropages_formosus
ENSGALG00000040109	LARP1	95	70.103	ENSSFOG00015020304	larp1	93	71.668	Scleropages_formosus
ENSGALG00000040109	LARP1	90	75.342	ENSSMAG00000007468	larp1	98	69.261	Scophthalmus_maximus
ENSGALG00000040109	LARP1	99	67.147	ENSSDUG00000000268	larp1	98	71.477	Seriola_dumerili
ENSGALG00000040109	LARP1	88	70.602	ENSSLDG00000016505	larp1	98	71.364	Seriola_lalandi_dorsalis
ENSGALG00000040109	LARP1	62	83.916	ENSSARG00000013907	-	88	84.912	Sorex_araneus
ENSGALG00000040109	LARP1	100	87.259	ENSSPUG00000012179	-	100	86.984	Sphenodon_punctatus
ENSGALG00000040109	LARP1	97	70.174	ENSSPAG00000003910	larp1	99	67.763	Stegastes_partitus
ENSGALG00000040109	LARP1	97	79.171	ENSSSCG00000017069	LARP1	100	82.000	Sus_scrofa
ENSGALG00000040109	LARP1	90	91.557	ENSTGUG00000000704	LARP1	100	94.298	Taeniopygia_guttata
ENSGALG00000040109	LARP1	99	70.062	ENSTRUG00000009470	larp1	99	66.915	Takifugu_rubripes
ENSGALG00000040109	LARP1	87	79.684	ENSTBEG00000003381	LARP1	100	82.054	Tupaia_belangeri
ENSGALG00000040109	LARP1	93	79.557	ENSTTRG00000015934	LARP1	100	82.046	Tursiops_truncatus
ENSGALG00000040109	LARP1	97	79.555	ENSUAMG00000019334	LARP1	100	77.125	Ursus_americanus
ENSGALG00000040109	LARP1	93	78.556	ENSUMAG00000002934	LARP1	96	84.364	Ursus_maritimus
ENSGALG00000040109	LARP1	90	80.778	ENSVVUG00000004644	LARP1	100	82.091	Vulpes_vulpes
ENSGALG00000040109	LARP1	97	76.843	ENSXETG00000008413	larp1	99	74.882	Xenopus_tropicalis
ENSGALG00000040109	LARP1	83	77.447	ENSXCOG00000004022	larp1	95	77.305	Xiphophorus_couchianus
ENSGALG00000040109	LARP1	97	67.573	ENSXMAG00000018780	larp1	99	66.148	Xiphophorus_maculatus