EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000041331 (Gene tree)
Gene ID: 423845
Gene Symbol: RRP12
Alias: -
Full Name: Gallus gallus ribosomal RNA processing 12 homolog (RRP12)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 9315 bases
Position: chr6:23310320-23319634
Accession: NM_001012908
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000068676	NUC173	PF08161.12	1.3e-76	1	1
ENSGALP00000051199	NUC173	PF08161.12	1.3e-76	1	1
ENSGALP00000043579	NUC173	PF08161.12	1.9e-76	1	1
ENSGALP00000049327	NUC173	PF08161.12	2.3e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000105486	-	5532	-	ENSGALP00000068676	1219 (aa)	-	-
ENSGALT00000051958	-	4476	-	ENSGALP00000043579	1343 (aa)	-	A0A1D5NTC5
ENSGALT00000048790	-	4797	-	ENSGALP00000051199	1224 (aa)	-	A0A1D5PEJ6
ENSGALT00000074239	-	4847	-	ENSGALP00000049327	1408 (aa)	-	A0A1D5P9C6

Gene Model

Click here to download ENSGALG00000041331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000041331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000041331	RRP12	96	71.952	ENSG00000052749	RRP12	100	77.528	Homo_sapiens
ENSGALG00000041331	RRP12	96	64.957	ENSAPOG00000013355	rrp12	99	62.596	Acanthochromis_polyacanthus
ENSGALG00000041331	RRP12	95	72.556	ENSAMEG00000000134	RRP12	100	70.696	Ailuropoda_melanoleuca
ENSGALG00000041331	RRP12	96	64.047	ENSACIG00000022673	rrp12	99	63.904	Amphilophus_citrinellus
ENSGALG00000041331	RRP12	96	64.872	ENSAOCG00000016149	rrp12	99	63.826	Amphiprion_ocellaris
ENSGALG00000041331	RRP12	96	64.505	ENSAPEG00000016023	rrp12	99	62.974	Amphiprion_percula
ENSGALG00000041331	RRP12	96	64.055	ENSATEG00000022627	rrp12	99	63.121	Anabas_testudineus
ENSGALG00000041331	RRP12	93	83.930	ENSAPLG00000014387	RRP12	100	83.930	Anas_platyrhynchos
ENSGALG00000041331	RRP12	96	70.325	ENSACAG00000002175	RRP12	99	70.247	Anolis_carolinensis
ENSGALG00000041331	RRP12	96	72.331	ENSANAG00000037485	RRP12	100	74.675	Aotus_nancymaae
ENSGALG00000041331	RRP12	96	64.127	ENSACLG00000007354	rrp12	99	63.749	Astatotilapia_calliptera
ENSGALG00000041331	RRP12	95	62.016	ENSAMXG00000012852	rrp12	99	60.775	Astyanax_mexicanus
ENSGALG00000041331	RRP12	95	71.835	ENSBTAG00000002191	RRP12	100	70.385	Bos_taurus
ENSGALG00000041331	RRP12	82	68.841	ENSCJAG00000016549	-	100	69.203	Callithrix_jacchus
ENSGALG00000041331	RRP12	95	71.979	ENSCAFG00000009043	RRP12	100	70.390	Canis_familiaris
ENSGALG00000041331	RRP12	95	71.979	ENSCAFG00020005991	RRP12	100	70.390	Canis_lupus_dingo
ENSGALG00000041331	RRP12	96	71.416	ENSCHIG00000011876	RRP12	100	68.578	Capra_hircus
ENSGALG00000041331	RRP12	51	63.766	ENSTSYG00000030210	-	100	63.766	Carlito_syrichta
ENSGALG00000041331	RRP12	92	64.858	ENSCAPG00000008991	RRP12	97	63.585	Cavia_aperea
ENSGALG00000041331	RRP12	96	71.050	ENSCPOG00000004215	RRP12	99	69.666	Cavia_porcellus
ENSGALG00000041331	RRP12	77	72.633	ENSCCAG00000024088	RRP12	99	74.840	Cebus_capucinus
ENSGALG00000041331	RRP12	68	65.827	ENSCCAG00000033123	-	83	66.156	Cebus_capucinus
ENSGALG00000041331	RRP12	95	66.867	ENSCATG00000045310	RRP12	100	65.975	Cercocebus_atys
ENSGALG00000041331	RRP12	96	71.050	ENSCLAG00000003753	RRP12	99	69.569	Chinchilla_lanigera
ENSGALG00000041331	RRP12	85	70.200	ENSCSAG00000005877	RRP12	100	70.209	Chlorocebus_sabaeus
ENSGALG00000041331	RRP12	57	75.415	ENSCHOG00000003095	-	61	75.748	Choloepus_hoffmanni
ENSGALG00000041331	RRP12	90	79.208	ENSCPBG00000011935	RRP12	97	79.290	Chrysemys_picta_bellii
ENSGALG00000041331	RRP12	61	39.928	ENSCSAVG00000006059	-	98	40.167	Ciona_savignyi
ENSGALG00000041331	RRP12	95	72.915	ENSCANG00000031653	RRP12	100	75.974	Colobus_angolensis_palliatus
ENSGALG00000041331	RRP12	87	70.213	ENSCGRG00001004338	Rrp12	100	70.213	Cricetulus_griseus_chok1gshd
ENSGALG00000041331	RRP12	96	69.924	ENSCGRG00000011965	Rrp12	100	69.124	Cricetulus_griseus_crigri
ENSGALG00000041331	RRP12	95	63.235	ENSCSEG00000007799	rrp12	99	61.872	Cynoglossus_semilaevis
ENSGALG00000041331	RRP12	96	65.073	ENSCVAG00000003418	rrp12	99	63.826	Cyprinodon_variegatus
ENSGALG00000041331	RRP12	95	62.684	ENSDARG00000022410	rrp12	99	61.318	Danio_rerio
ENSGALG00000041331	RRP12	95	72.539	ENSDNOG00000005120	RRP12	99	70.561	Dasypus_novemcinctus
ENSGALG00000041331	RRP12	95	71.613	ENSDORG00000009199	Rrp12	99	69.739	Dipodomys_ordii
ENSGALG00000041331	RRP12	88	61.972	ENSETEG00000002455	RRP12	92	61.972	Echinops_telfairi
ENSGALG00000041331	RRP12	84	66.667	ENSEBUG00000006555	rrp12	98	66.667	Eptatretus_burgeri
ENSGALG00000041331	RRP12	95	73.219	ENSEASG00005008693	RRP12	100	71.681	Equus_asinus_asinus
ENSGALG00000041331	RRP12	95	70.901	ENSECAG00000010892	RRP12	100	72.236	Equus_caballus
ENSGALG00000041331	RRP12	61	62.865	ENSEEUG00000005447	-	69	58.511	Erinaceus_europaeus
ENSGALG00000041331	RRP12	96	62.351	ENSELUG00000010510	rrp12	100	62.130	Esox_lucius
ENSGALG00000041331	RRP12	96	72.666	ENSFCAG00000028639	RRP12	100	74.522	Felis_catus
ENSGALG00000041331	RRP12	90	88.807	ENSFALG00000008458	RRP12	99	88.807	Ficedula_albicollis
ENSGALG00000041331	RRP12	96	71.672	ENSFDAG00000019108	RRP12	95	70.470	Fukomys_damarensis
ENSGALG00000041331	RRP12	96	57.765	ENSFHEG00000004148	rrp12	99	57.562	Fundulus_heteroclitus
ENSGALG00000041331	RRP12	96	59.761	ENSGMOG00000004188	rrp12	99	57.430	Gadus_morhua
ENSGALG00000041331	RRP12	96	65.585	ENSGAFG00000009038	rrp12	99	64.198	Gambusia_affinis
ENSGALG00000041331	RRP12	96	61.604	ENSGACG00000007175	rrp12	99	60.541	Gasterosteus_aculeatus
ENSGALG00000041331	RRP12	71	78.984	ENSGAGG00000019169	RRP12	96	78.984	Gopherus_agassizii
ENSGALG00000041331	RRP12	96	72.255	ENSGGOG00000014850	RRP12	100	75.325	Gorilla_gorilla
ENSGALG00000041331	RRP12	96	63.891	ENSHBUG00000023527	rrp12	99	63.749	Haplochromis_burtoni
ENSGALG00000041331	RRP12	96	71.355	ENSHGLG00000016772	RRP12	99	70.177	Heterocephalus_glaber_female
ENSGALG00000041331	RRP12	96	71.355	ENSHGLG00100015110	RRP12	99	70.177	Heterocephalus_glaber_male
ENSGALG00000041331	RRP12	96	62.618	ENSHCOG00000019519	rrp12	99	61.694	Hippocampus_comes
ENSGALG00000041331	RRP12	96	61.913	ENSIPUG00000000311	RRP12	99	61.270	Ictalurus_punctatus
ENSGALG00000041331	RRP12	95	72.256	ENSSTOG00000006515	RRP12	100	70.615	Ictidomys_tridecemlineatus
ENSGALG00000041331	RRP12	92	71.886	ENSJJAG00000000110	Rrp12	99	70.584	Jaculus_jaculus
ENSGALG00000041331	RRP12	95	64.914	ENSKMAG00000020621	rrp12	99	63.235	Kryptolebias_marmoratus
ENSGALG00000041331	RRP12	96	62.543	ENSLBEG00000015335	rrp12	99	61.783	Labrus_bergylta
ENSGALG00000041331	RRP12	70	66.171	ENSLACG00000016633	RRP12	81	66.171	Latimeria_chalumnae
ENSGALG00000041331	RRP12	96	63.288	ENSLOCG00000003846	rrp12	99	62.733	Lepisosteus_oculatus
ENSGALG00000041331	RRP12	96	71.247	ENSLAFG00000015965	RRP12	99	69.985	Loxodonta_africana
ENSGALG00000041331	RRP12	95	72.829	ENSMFAG00000041558	RRP12	100	75.325	Macaca_fascicularis
ENSGALG00000041331	RRP12	95	72.829	ENSMMUG00000019634	RRP12	100	75.325	Macaca_mulatta
ENSGALG00000041331	RRP12	95	69.819	ENSMNEG00000036759	RRP12	100	75.325	Macaca_nemestrina
ENSGALG00000041331	RRP12	95	67.639	ENSMLEG00000041317	RRP12	100	75.325	Mandrillus_leucophaeus
ENSGALG00000041331	RRP12	96	64.219	ENSMAMG00000002964	rrp12	99	63.726	Mastacembelus_armatus
ENSGALG00000041331	RRP12	96	64.439	ENSMZEG00005003241	rrp12	99	63.904	Maylandia_zebra
ENSGALG00000041331	RRP12	96	94.145	ENSMGAG00000009829	RRP12	100	94.145	Meleagris_gallopavo
ENSGALG00000041331	RRP12	96	70.979	ENSMAUG00000020743	Rrp12	100	66.897	Mesocricetus_auratus
ENSGALG00000041331	RRP12	96	71.734	ENSMICG00000007624	RRP12	100	74.675	Microcebus_murinus
ENSGALG00000041331	RRP12	96	71.100	ENSMOCG00000006753	Rrp12	99	69.846	Microtus_ochrogaster
ENSGALG00000041331	RRP12	96	63.279	ENSMMOG00000010708	rrp12	99	62.082	Mola_mola
ENSGALG00000041331	RRP12	96	70.456	ENSMODG00000004315	RRP12	99	70.456	Monodelphis_domestica
ENSGALG00000041331	RRP12	96	63.768	ENSMALG00000016560	rrp12	99	63.322	Monopterus_albus
ENSGALG00000041331	RRP12	96	70.723	MGP_CAROLIEiJ_G0022957	Rrp12	99	68.931	Mus_caroli
ENSGALG00000041331	RRP12	96	70.383	ENSMUSG00000035049	Rrp12	99	69.124	Mus_musculus
ENSGALG00000041331	RRP12	96	70.588	MGP_PahariEiJ_G0014447	Rrp12	99	69.308	Mus_pahari
ENSGALG00000041331	RRP12	96	70.638	MGP_SPRETEiJ_G0023878	Rrp12	99	69.355	Mus_spretus
ENSGALG00000041331	RRP12	95	71.735	ENSMPUG00000017046	RRP12	100	70.038	Mustela_putorius_furo
ENSGALG00000041331	RRP12	96	71.697	ENSMLUG00000017160	RRP12	100	70.805	Myotis_lucifugus
ENSGALG00000041331	RRP12	96	70.748	ENSNGAG00000024144	Rrp12	99	69.685	Nannospalax_galili
ENSGALG00000041331	RRP12	96	64.041	ENSNBRG00000009987	rrp12	99	62.742	Neolamprologus_brichardi
ENSGALG00000041331	RRP12	92	75.325	ENSNLEG00000013762	RRP12	100	75.325	Nomascus_leucogenys
ENSGALG00000041331	RRP12	96	65.429	ENSMEUG00000003185	RRP12	99	65.429	Notamacropus_eugenii
ENSGALG00000041331	RRP12	91	69.601	ENSOPRG00000005001	RRP12	94	69.601	Ochotona_princeps
ENSGALG00000041331	RRP12	96	70.880	ENSODEG00000016439	RRP12	99	68.976	Octodon_degus
ENSGALG00000041331	RRP12	96	64.125	ENSONIG00000009528	rrp12	99	63.981	Oreochromis_niloticus
ENSGALG00000041331	RRP12	96	68.074	ENSOANG00000006560	RRP12	99	67.843	Ornithorhynchus_anatinus
ENSGALG00000041331	RRP12	95	72.515	ENSOCUG00000005662	RRP12	100	70.285	Oryctolagus_cuniculus
ENSGALG00000041331	RRP12	96	63.939	ENSORLG00000008688	rrp12	99	63.153	Oryzias_latipes
ENSGALG00000041331	RRP12	96	64.280	ENSORLG00020002355	rrp12	99	63.420	Oryzias_latipes_hni
ENSGALG00000041331	RRP12	96	63.841	ENSORLG00015006709	rrp12	99	63.439	Oryzias_latipes_hsok
ENSGALG00000041331	RRP12	96	64.237	ENSOMEG00000002609	rrp12	99	64.082	Oryzias_melastigma
ENSGALG00000041331	RRP12	95	71.997	ENSOGAG00000001626	RRP12	99	69.892	Otolemur_garnettii
ENSGALG00000041331	RRP12	95	71.012	ENSOARG00000009681	RRP12	100	69.472	Ovis_aries
ENSGALG00000041331	RRP12	92	74.359	ENSPPAG00000043885	RRP12	100	75.325	Pan_paniscus
ENSGALG00000041331	RRP12	96	72.666	ENSPPRG00000002029	RRP12	100	74.522	Panthera_pardus
ENSGALG00000041331	RRP12	89	73.885	ENSPTIG00000004428	RRP12	100	73.885	Panthera_tigris_altaica
ENSGALG00000041331	RRP12	92	74.359	ENSPTRG00000002806	RRP12	100	75.325	Pan_troglodytes
ENSGALG00000041331	RRP12	95	72.275	ENSPANG00000021360	RRP12	100	75.325	Papio_anubis
ENSGALG00000041331	RRP12	96	65.346	ENSPKIG00000016516	rrp12	99	64.765	Paramormyrops_kingsleyae
ENSGALG00000041331	RRP12	96	62.564	ENSPMGG00000020217	rrp12	99	61.842	Periophthalmus_magnuspinnatus
ENSGALG00000041331	RRP12	96	71.344	ENSPEMG00000008437	Rrp12	99	70.031	Peromyscus_maniculatus_bairdii
ENSGALG00000041331	RRP12	79	59.118	ENSPMAG00000007493	rrp12	82	59.118	Petromyzon_marinus
ENSGALG00000041331	RRP12	95	78.333	ENSPCIG00000002157	RRP12	99	70.620	Phascolarctos_cinereus
ENSGALG00000041331	RRP12	96	64.731	ENSPFOG00000014975	rrp12	99	63.503	Poecilia_formosa
ENSGALG00000041331	RRP12	96	64.646	ENSPLAG00000009840	rrp12	99	63.426	Poecilia_latipinna
ENSGALG00000041331	RRP12	96	64.902	ENSPMEG00000021871	rrp12	99	63.657	Poecilia_mexicana
ENSGALG00000041331	RRP12	96	64.286	ENSPREG00000020950	rrp12	99	62.980	Poecilia_reticulata
ENSGALG00000041331	RRP12	96	71.270	ENSPPYG00000002528	RRP12	100	70.046	Pongo_abelii
ENSGALG00000041331	RRP12	91	78.771	ENSPCAG00000008967	RRP12	94	78.771	Procavia_capensis
ENSGALG00000041331	RRP12	95	71.810	ENSPCOG00000014009	RRP12	100	74.675	Propithecus_coquereli
ENSGALG00000041331	RRP12	96	69.139	ENSPVAG00000003370	RRP12	100	67.385	Pteropus_vampyrus
ENSGALG00000041331	RRP12	96	64.212	ENSPNYG00000009451	rrp12	99	63.904	Pundamilia_nyererei
ENSGALG00000041331	RRP12	95	63.463	ENSPNAG00000007658	rrp12	99	61.938	Pygocentrus_nattereri
ENSGALG00000041331	RRP12	96	71.295	ENSRNOG00000048495	Rrp12	100	69.892	Rattus_norvegicus
ENSGALG00000041331	RRP12	95	72.829	ENSRBIG00000021296	RRP12	100	75.974	Rhinopithecus_bieti
ENSGALG00000041331	RRP12	95	72.829	ENSRROG00000032482	RRP12	100	75.974	Rhinopithecus_roxellana
ENSGALG00000041331	RRP12	96	72.184	ENSSBOG00000030992	RRP12	100	74.675	Saimiri_boliviensis_boliviensis
ENSGALG00000041331	RRP12	96	71.086	ENSSHAG00000018275	RRP12	99	70.293	Sarcophilus_harrisii
ENSGALG00000041331	RRP12	96	65.068	ENSSFOG00015016400	rrp12	99	63.854	Scleropages_formosus
ENSGALG00000041331	RRP12	96	63.219	ENSSMAG00000004047	rrp12	99	63.186	Scophthalmus_maximus
ENSGALG00000041331	RRP12	96	64.395	ENSSDUG00000022871	rrp12	99	63.418	Seriola_dumerili
ENSGALG00000041331	RRP12	96	64.055	ENSSLDG00000003038	rrp12	99	63.186	Seriola_lalandi_dorsalis
ENSGALG00000041331	RRP12	96	73.729	ENSSPUG00000012221	RRP12	99	73.806	Sphenodon_punctatus
ENSGALG00000041331	RRP12	96	64.439	ENSSPAG00000002261	rrp12	99	63.517	Stegastes_partitus
ENSGALG00000041331	RRP12	95	71.907	ENSSSCG00000010514	RRP12	99	70.200	Sus_scrofa
ENSGALG00000041331	RRP12	85	86.911	ENSTGUG00000009711	RRP12	100	86.911	Taeniopygia_guttata
ENSGALG00000041331	RRP12	96	60.068	ENSTRUG00000012017	rrp12	99	59.503	Takifugu_rubripes
ENSGALG00000041331	RRP12	95	64.273	ENSTNIG00000016522	rrp12	99	62.974	Tetraodon_nigroviridis
ENSGALG00000041331	RRP12	75	82.039	ENSTBEG00000004907	RRP12	80	82.039	Tupaia_belangeri
ENSGALG00000041331	RRP12	95	69.793	ENSTTRG00000009878	RRP12	99	68.154	Tursiops_truncatus
ENSGALG00000041331	RRP12	96	71.743	ENSUAMG00000009092	RRP12	100	70.719	Ursus_americanus
ENSGALG00000041331	RRP12	96	70.678	ENSUMAG00000021621	RRP12	100	69.869	Ursus_maritimus
ENSGALG00000041331	RRP12	95	71.637	ENSVVUG00000023168	RRP12	99	70.201	Vulpes_vulpes
ENSGALG00000041331	RRP12	96	67.609	ENSXETG00000003430	rrp12	99	66.692	Xenopus_tropicalis
ENSGALG00000041331	RRP12	95	64.888	ENSXCOG00000012082	rrp12	99	63.727	Xiphophorus_couchianus
ENSGALG00000041331	RRP12	96	64.786	ENSXMAG00000013498	rrp12	99	63.398	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005730	nucleolus	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0031965	nuclear membrane	-	IEA	Component