EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000041556 (Gene tree)
Gene ID: 426522
Gene Symbol: GPATCH8
Alias: GPATC8|KIAA0553
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 65619 bases
Position: chr27:3911372-3976990
Accession: 426522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000074095	zf-C2H2_jaz	PF12171.8	2.5e-06	1	1
ENSGALP00000053384	zf-C2H2_jaz	PF12171.8	2.5e-06	1	1
ENSGALP00000072435	zf-C2H2_jaz	PF12171.8	2.7e-06	1	1
ENSGALP00000074133	zf-C2H2_jaz	PF12171.8	2.9e-06	1	1
ENSGALP00000074095	G-patch	PF01585.23	2.6e-13	1	1
ENSGALP00000053384	G-patch	PF01585.23	2.7e-13	1	1
ENSGALP00000072435	G-patch	PF01585.23	2.8e-13	1	1
ENSGALP00000074133	G-patch	PF01585.23	2.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000106590	GPATCH8-204	5420	-	ENSGALP00000074095	1447 (aa)	-	-
ENSGALT00000063910	GPATCH8-202	5468	XM_025144201	ENSGALP00000053384	1463 (aa)	XP_024999969	A0A1D5PKM3
ENSGALT00000102266	GPATCH8-203	5633	XM_015299300	ENSGALP00000072435	1518 (aa)	XP_015154786	-
ENSGALT00000103933	GPATCH8-201	4983	-	ENSGALP00000074133	1660 (aa)	-	-

Gene Model

Click here to download ENSGALG00000041556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000041556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000041556	GPATCH8	54	61.510	ENSG00000186566	GPATCH8	93	100.000	Homo_sapiens
ENSGALG00000041556	GPATCH8	59	63.077	ENSACIG00000012241	gpatch8	81	53.254	Amphilophus_citrinellus
ENSGALG00000041556	GPATCH8	54	47.826	ENSAOCG00000018102	gpatch8	77	52.579	Amphiprion_ocellaris
ENSGALG00000041556	GPATCH8	54	47.944	ENSAPEG00000016776	gpatch8	76	54.042	Amphiprion_percula
ENSGALG00000041556	GPATCH8	58	60.507	ENSATEG00000003247	gpatch8	57	60.870	Anabas_testudineus
ENSGALG00000041556	GPATCH8	100	66.208	ENSACAG00000012522	GPATCH8	100	65.488	Anolis_carolinensis
ENSGALG00000041556	GPATCH8	54	61.389	ENSANAG00000032773	GPATCH8	99	64.467	Aotus_nancymaae
ENSGALG00000041556	GPATCH8	75	53.931	ENSACLG00000004165	gpatch8	79	55.329	Astatotilapia_calliptera
ENSGALG00000041556	GPATCH8	51	62.304	ENSBTAG00000038316	GPATCH8	99	64.143	Bos_taurus
ENSGALG00000041556	GPATCH8	54	61.389	ENSCJAG00000009807	GPATCH8	99	64.224	Callithrix_jacchus
ENSGALG00000041556	GPATCH8	50	63.130	ENSCAFG00000014136	GPATCH8	99	64.863	Canis_familiaris
ENSGALG00000041556	GPATCH8	51	62.681	ENSCAFG00020009830	GPATCH8	99	64.820	Canis_lupus_dingo
ENSGALG00000041556	GPATCH8	52	61.598	ENSCHIG00000008962	GPATCH8	99	63.933	Capra_hircus
ENSGALG00000041556	GPATCH8	98	60.325	ENSCAPG00000004450	GPATCH8	99	60.448	Cavia_aperea
ENSGALG00000041556	GPATCH8	98	61.889	ENSCPOG00000039068	GPATCH8	100	60.816	Cavia_porcellus
ENSGALG00000041556	GPATCH8	54	61.369	ENSCCAG00000030686	GPATCH8	100	64.106	Cebus_capucinus
ENSGALG00000041556	GPATCH8	98	91.538	ENSCPBG00000008955	GPATCH8	100	72.306	Chrysemys_picta_bellii
ENSGALG00000041556	GPATCH8	57	58.449	ENSCGRG00001020210	Gpatch8	100	62.711	Cricetulus_griseus_chok1gshd
ENSGALG00000041556	GPATCH8	57	58.449	ENSCGRG00000017090	Gpatch8	100	62.711	Cricetulus_griseus_crigri
ENSGALG00000041556	GPATCH8	56	60.915	ENSDNOG00000005102	GPATCH8	99	64.581	Dasypus_novemcinctus
ENSGALG00000041556	GPATCH8	71	44.240	ENSEBUG00000005749	gpatch8	70	46.463	Eptatretus_burgeri
ENSGALG00000041556	GPATCH8	50	63.612	ENSEASG00005010264	GPATCH8	92	63.672	Equus_asinus_asinus
ENSGALG00000041556	GPATCH8	53	64.868	ENSECAG00000040232	GPATCH8	99	63.607	Equus_caballus
ENSGALG00000041556	GPATCH8	50	63.660	ENSFCAG00000043334	GPATCH8	99	64.876	Felis_catus
ENSGALG00000041556	GPATCH8	98	79.322	ENSFALG00000009554	GPATCH8	100	79.458	Ficedula_albicollis
ENSGALG00000041556	GPATCH8	100	71.054	ENSGAGG00000008358	GPATCH8	99	72.421	Gopherus_agassizii
ENSGALG00000041556	GPATCH8	89	73.108	ENSGGOG00000013860	GPATCH8	100	61.309	Gorilla_gorilla
ENSGALG00000041556	GPATCH8	57	63.566	ENSHBUG00000002669	gpatch8	57	61.372	Haplochromis_burtoni
ENSGALG00000041556	GPATCH8	100	61.503	ENSHGLG00000017687	GPATCH8	100	59.987	Heterocephalus_glaber_female
ENSGALG00000041556	GPATCH8	76	68.412	ENSHGLG00100010738	GPATCH8	95	67.513	Heterocephalus_glaber_male
ENSGALG00000041556	GPATCH8	52	61.647	ENSSTOG00000025022	GPATCH8	99	63.533	Ictidomys_tridecemlineatus
ENSGALG00000041556	GPATCH8	54	60.539	ENSJJAG00000017797	Gpatch8	100	62.354	Jaculus_jaculus
ENSGALG00000041556	GPATCH8	98	56.490	ENSLACG00000017530	GPATCH8	100	57.004	Latimeria_chalumnae
ENSGALG00000041556	GPATCH8	52	62.791	ENSLAFG00000032250	GPATCH8	99	60.031	Loxodonta_africana
ENSGALG00000041556	GPATCH8	75	53.774	ENSMZEG00005022584	gpatch8	79	55.172	Maylandia_zebra
ENSGALG00000041556	GPATCH8	54	59.756	ENSMAUG00000021770	Gpatch8	99	63.393	Mesocricetus_auratus
ENSGALG00000041556	GPATCH8	52	63.097	ENSMICG00000028586	GPATCH8	99	64.702	Microcebus_murinus
ENSGALG00000041556	GPATCH8	54	59.107	ENSMOCG00000001658	Gpatch8	100	61.920	Microtus_ochrogaster
ENSGALG00000041556	GPATCH8	100	63.932	ENSMODG00000011442	GPATCH8	99	65.441	Monodelphis_domestica
ENSGALG00000041556	GPATCH8	87	47.017	ENSMALG00000004204	gpatch8	78	51.659	Monopterus_albus
ENSGALG00000041556	GPATCH8	54	60.391	ENSMUSG00000034621	Gpatch8	99	63.570	Mus_musculus
ENSGALG00000041556	GPATCH8	54	60.636	MGP_PahariEiJ_G0018385	Gpatch8	100	62.171	Mus_pahari
ENSGALG00000041556	GPATCH8	50	63.540	MGP_SPRETEiJ_G0018098	Gpatch8	99	63.757	Mus_spretus
ENSGALG00000041556	GPATCH8	54	61.071	ENSMPUG00000009274	GPATCH8	99	64.937	Mustela_putorius_furo
ENSGALG00000041556	GPATCH8	64	90.604	ENSMLUG00000013840	GPATCH8	97	92.157	Myotis_lucifugus
ENSGALG00000041556	GPATCH8	54	61.520	ENSNGAG00000021860	Gpatch8	100	62.879	Nannospalax_galili
ENSGALG00000041556	GPATCH8	57	63.566	ENSNBRG00000016402	gpatch8	57	61.372	Neolamprologus_brichardi
ENSGALG00000041556	GPATCH8	77	58.996	ENSMEUG00000011799	GPATCH8	100	61.116	Notamacropus_eugenii
ENSGALG00000041556	GPATCH8	95	80.172	ENSOPRG00000008816	GPATCH8	97	80.172	Ochotona_princeps
ENSGALG00000041556	GPATCH8	54	61.104	ENSOCUG00000003291	GPATCH8	100	63.377	Oryctolagus_cuniculus
ENSGALG00000041556	GPATCH8	57	61.390	ENSORLG00020006656	gpatch8	75	54.714	Oryzias_latipes_hni
ENSGALG00000041556	GPATCH8	57	61.776	ENSOMEG00000023809	gpatch8	74	54.726	Oryzias_melastigma
ENSGALG00000041556	GPATCH8	54	59.562	ENSOARG00000008370	GPATCH8	100	59.003	Ovis_aries
ENSGALG00000041556	GPATCH8	54	61.632	ENSPPAG00000040523	GPATCH8	100	63.997	Pan_paniscus
ENSGALG00000041556	GPATCH8	54	60.976	ENSPPRG00000023310	GPATCH8	99	65.040	Panthera_pardus
ENSGALG00000041556	GPATCH8	54	60.976	ENSPTIG00000020001	GPATCH8	100	63.577	Panthera_tigris_altaica
ENSGALG00000041556	GPATCH8	54	61.632	ENSPTRG00000009278	GPATCH8	99	64.376	Pan_troglodytes
ENSGALG00000041556	GPATCH8	84	63.754	ENSPSIG00000006255	GPATCH8	99	67.675	Pelodiscus_sinensis
ENSGALG00000041556	GPATCH8	54	60.513	ENSPEMG00000008337	Gpatch8	99	62.882	Peromyscus_maniculatus_bairdii
ENSGALG00000041556	GPATCH8	94	63.165	ENSPCIG00000019927	GPATCH8	100	63.866	Phascolarctos_cinereus
ENSGALG00000041556	GPATCH8	54	60.901	ENSPPYG00000008329	GPATCH8	99	64.061	Pongo_abelii
ENSGALG00000041556	GPATCH8	59	100.000	ENSPCAG00000004441	GPATCH8	76	100.000	Procavia_capensis
ENSGALG00000041556	GPATCH8	100	61.782	ENSPVAG00000003155	GPATCH8	99	64.219	Pteropus_vampyrus
ENSGALG00000041556	GPATCH8	57	63.566	ENSPNYG00000009426	gpatch8	79	55.172	Pundamilia_nyererei
ENSGALG00000041556	GPATCH8	51	62.272	ENSRNOG00000021044	Gpatch8	100	61.652	Rattus_norvegicus
ENSGALG00000041556	GPATCH8	54	61.322	ENSSBOG00000023544	GPATCH8	99	64.352	Saimiri_boliviensis_boliviensis
ENSGALG00000041556	GPATCH8	100	62.987	ENSSHAG00000016140	GPATCH8	100	63.974	Sarcophilus_harrisii
ENSGALG00000041556	GPATCH8	55	62.121	ENSSDUG00000018065	gpatch8	66	62.642	Seriola_dumerili
ENSGALG00000041556	GPATCH8	59	62.934	ENSSLDG00000009225	gpatch8	59	59.717	Seriola_lalandi_dorsalis
ENSGALG00000041556	GPATCH8	54	63.703	ENSSSCG00000017357	ITGA2B	100	65.350	Sus_scrofa
ENSGALG00000041556	GPATCH8	75	53.655	ENSTRUG00000020474	gpatch8	75	52.574	Takifugu_rubripes
ENSGALG00000041556	GPATCH8	76	75.542	ENSTBEG00000009486	GPATCH8	91	74.923	Tupaia_belangeri
ENSGALG00000041556	GPATCH8	52	57.727	ENSTTRG00000010527	GPATCH8	100	61.657	Tursiops_truncatus
ENSGALG00000041556	GPATCH8	50	63.276	ENSVVUG00000017996	GPATCH8	99	64.977	Vulpes_vulpes