EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000041972 (Gene tree)
Gene ID: 768362
Gene Symbol: POP4
Alias: -
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 2832 bases
Position: chr11:8355856-8358687
Accession: 30081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000049263	UPF0086	PF01868.16	2.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000055017	POP4-201	1160	-	ENSGALP00000049263	238 (aa)	-	A0A1D5P962

Gene Model

Click here to download ENSGALG00000041972's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03008	Ribosome biogenesis in eukaryotes	KEGG
gga03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000041972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000041972	POP4	92	69.091	ENSG00000105171	POP4	100	81.250	Homo_sapiens
ENSGALG00000041972	POP4	87	61.722	ENSAMEG00000003172	-	94	61.722	Ailuropoda_melanoleuca
ENSGALG00000041972	POP4	92	66.972	ENSAMEG00000018329	-	99	66.972	Ailuropoda_melanoleuca
ENSGALG00000041972	POP4	92	58.904	ENSACIG00000008358	pop4	99	58.904	Amphilophus_citrinellus
ENSGALG00000041972	POP4	84	59.901	ENSAOCG00000010116	pop4	98	58.911	Amphiprion_ocellaris
ENSGALG00000041972	POP4	92	56.561	ENSAPEG00000002829	pop4	93	55.656	Amphiprion_percula
ENSGALG00000041972	POP4	92	57.207	ENSATEG00000013028	pop4	100	56.306	Anabas_testudineus
ENSGALG00000041972	POP4	85	87.624	ENSAPLG00000014051	POP4	98	87.624	Anas_platyrhynchos
ENSGALG00000041972	POP4	92	68.182	ENSANAG00000020295	POP4	100	68.182	Aotus_nancymaae
ENSGALG00000041972	POP4	93	59.276	ENSACLG00000000526	pop4	99	59.817	Astatotilapia_calliptera
ENSGALG00000041972	POP4	92	57.273	ENSAMXG00000002899	pop4	100	57.273	Astyanax_mexicanus
ENSGALG00000041972	POP4	92	70.909	ENSBTAG00000002223	POP4	100	70.909	Bos_taurus
ENSGALG00000041972	POP4	92	67.421	ENSCJAG00000046750	POP4	98	75.141	Callithrix_jacchus
ENSGALG00000041972	POP4	76	71.978	ENSCAFG00000007630	POP4	100	71.978	Canis_familiaris
ENSGALG00000041972	POP4	92	70.455	ENSCHIG00000016743	POP4	100	70.455	Capra_hircus
ENSGALG00000041972	POP4	92	67.727	ENSTSYG00000003488	POP4	100	67.727	Carlito_syrichta
ENSGALG00000041972	POP4	91	47.926	ENSCAPG00000011105	POP4	100	47.926	Cavia_aperea
ENSGALG00000041972	POP4	92	66.364	ENSCPOG00000002992	POP4	100	66.364	Cavia_porcellus
ENSGALG00000041972	POP4	92	68.182	ENSCCAG00000020285	-	100	68.182	Cebus_capucinus
ENSGALG00000041972	POP4	92	58.636	ENSCCAG00000034244	-	100	58.636	Cebus_capucinus
ENSGALG00000041972	POP4	92	68.636	ENSCATG00000036022	POP4	100	79.167	Cercocebus_atys
ENSGALG00000041972	POP4	92	67.431	ENSCLAG00000013162	POP4	100	66.818	Chinchilla_lanigera
ENSGALG00000041972	POP4	92	69.725	ENSCSAG00000004868	POP4	100	69.725	Chlorocebus_sabaeus
ENSGALG00000041972	POP4	91	49.537	ENSCHOG00000002071	POP4	100	49.309	Choloepus_hoffmanni
ENSGALG00000041972	POP4	92	81.364	ENSCPBG00000016132	POP4	100	81.364	Chrysemys_picta_bellii
ENSGALG00000041972	POP4	51	36.585	ENSCING00000023871	-	72	34.752	Ciona_intestinalis
ENSGALG00000041972	POP4	85	71.782	ENSCANG00000005924	POP4	100	71.782	Colobus_angolensis_palliatus
ENSGALG00000041972	POP4	92	67.273	ENSCGRG00001017185	Pop4	100	67.727	Cricetulus_griseus_chok1gshd
ENSGALG00000041972	POP4	92	67.273	ENSCGRG00000008155	Pop4	100	67.727	Cricetulus_griseus_crigri
ENSGALG00000041972	POP4	92	52.055	ENSCSEG00000002946	pop4	99	52.055	Cynoglossus_semilaevis
ENSGALG00000041972	POP4	96	39.565	ENSCVAG00000018602	POP4	99	39.565	Cyprinodon_variegatus
ENSGALG00000041972	POP4	92	60.000	ENSDARG00000101472	pop4	100	60.000	Danio_rerio
ENSGALG00000041972	POP4	92	69.545	ENSDNOG00000047663	POP4	88	69.545	Dasypus_novemcinctus
ENSGALG00000041972	POP4	72	62.791	ENSDORG00000008577	Pop4	100	62.791	Dipodomys_ordii
ENSGALG00000041972	POP4	64	34.375	FBgn0035831	CG8038	71	34.932	Drosophila_melanogaster
ENSGALG00000041972	POP4	91	56.682	ENSETEG00000003607	POP4	100	56.682	Echinops_telfairi
ENSGALG00000041972	POP4	92	42.534	ENSEBUG00000008575	pop4	100	41.629	Eptatretus_burgeri
ENSGALG00000041972	POP4	84	46.296	ENSEBUG00000010447	pop4	83	44.860	Eptatretus_burgeri
ENSGALG00000041972	POP4	92	39.574	ENSEBUG00000004305	pop4	100	38.197	Eptatretus_burgeri
ENSGALG00000041972	POP4	92	71.154	ENSECAG00000020206	POP4	81	71.154	Equus_caballus
ENSGALG00000041972	POP4	83	52.284	ENSEEUG00000013109	POP4	99	52.284	Erinaceus_europaeus
ENSGALG00000041972	POP4	92	57.273	ENSELUG00000019812	pop4	100	57.273	Esox_lucius
ENSGALG00000041972	POP4	92	68.182	ENSFCAG00000001619	POP4	100	68.182	Felis_catus
ENSGALG00000041972	POP4	91	81.944	ENSFALG00000000206	POP4	96	81.944	Ficedula_albicollis
ENSGALG00000041972	POP4	92	66.364	ENSFDAG00000017859	POP4	100	66.364	Fukomys_damarensis
ENSGALG00000041972	POP4	91	50.917	ENSFHEG00000012745	pop4	98	50.000	Fundulus_heteroclitus
ENSGALG00000041972	POP4	84	57.214	ENSGMOG00000000335	pop4	99	56.219	Gadus_morhua
ENSGALG00000041972	POP4	73	50.282	ENSGAFG00000003571	pop4	98	49.718	Gambusia_affinis
ENSGALG00000041972	POP4	89	57.870	ENSGACG00000014510	pop4	94	62.644	Gasterosteus_aculeatus
ENSGALG00000041972	POP4	93	81.982	ENSGAGG00000024544	POP4	80	81.982	Gopherus_agassizii
ENSGALG00000041972	POP4	92	69.725	ENSGGOG00000038346	POP4	99	69.725	Gorilla_gorilla
ENSGALG00000041972	POP4	92	58.904	ENSHBUG00000021821	pop4	99	58.904	Haplochromis_burtoni
ENSGALG00000041972	POP4	92	67.890	ENSHGLG00000015798	POP4	99	67.890	Heterocephalus_glaber_female
ENSGALG00000041972	POP4	92	67.273	ENSHGLG00100009737	POP4	100	67.273	Heterocephalus_glaber_male
ENSGALG00000041972	POP4	92	57.991	ENSHCOG00000020937	pop4	99	57.991	Hippocampus_comes
ENSGALG00000041972	POP4	92	56.364	ENSIPUG00000013652	pop4	100	56.364	Ictalurus_punctatus
ENSGALG00000041972	POP4	92	67.727	ENSSTOG00000011016	POP4	100	67.727	Ictidomys_tridecemlineatus
ENSGALG00000041972	POP4	94	66.816	ENSJJAG00000013376	Pop4	100	67.727	Jaculus_jaculus
ENSGALG00000041972	POP4	92	59.729	ENSKMAG00000012250	pop4	99	58.824	Kryptolebias_marmoratus
ENSGALG00000041972	POP4	92	50.679	ENSLBEG00000014139	pop4	99	50.679	Labrus_bergylta
ENSGALG00000041972	POP4	92	50.679	ENSLBEG00000018846	-	99	50.679	Labrus_bergylta
ENSGALG00000041972	POP4	91	68.203	ENSLACG00000008581	POP4	98	68.203	Latimeria_chalumnae
ENSGALG00000041972	POP4	92	67.273	ENSLOCG00000005597	pop4	100	67.273	Lepisosteus_oculatus
ENSGALG00000041972	POP4	91	67.742	ENSLAFG00000000084	POP4	100	66.818	Loxodonta_africana
ENSGALG00000041972	POP4	92	69.091	ENSMFAG00000029606	POP4	100	69.091	Macaca_fascicularis
ENSGALG00000041972	POP4	92	67.873	ENSMMUG00000017424	POP4	100	69.231	Macaca_mulatta
ENSGALG00000041972	POP4	92	67.873	ENSMNEG00000031374	POP4	100	69.231	Macaca_nemestrina
ENSGALG00000041972	POP4	92	69.545	ENSMLEG00000043454	POP4	100	69.545	Mandrillus_leucophaeus
ENSGALG00000041972	POP4	93	56.502	ENSMAMG00000011716	pop4	100	55.605	Mastacembelus_armatus
ENSGALG00000041972	POP4	92	59.817	ENSMZEG00005002360	pop4	99	59.817	Maylandia_zebra
ENSGALG00000041972	POP4	95	94.222	ENSMGAG00000005337	POP4	100	94.222	Meleagris_gallopavo
ENSGALG00000041972	POP4	92	65.909	ENSMAUG00000020110	Pop4	100	65.909	Mesocricetus_auratus
ENSGALG00000041972	POP4	92	66.055	ENSMICG00000035730	POP4	98	66.055	Microcebus_murinus
ENSGALG00000041972	POP4	92	56.621	ENSMMOG00000015321	pop4	99	56.621	Mola_mola
ENSGALG00000041972	POP4	95	68.722	ENSMODG00000029406	POP4	98	68.722	Monodelphis_domestica
ENSGALG00000041972	POP4	92	57.991	ENSMALG00000012571	pop4	99	57.991	Monopterus_albus
ENSGALG00000041972	POP4	92	65.611	MGP_CAROLIEiJ_G0029600	Pop4	100	65.611	Mus_caroli
ENSGALG00000041972	POP4	92	65.158	ENSMUSG00000030423	Pop4	100	65.158	Mus_musculus
ENSGALG00000041972	POP4	92	65.000	MGP_SPRETEiJ_G0030699	Pop4	100	65.455	Mus_spretus
ENSGALG00000041972	POP4	92	57.919	ENSMPUG00000008063	-	100	57.919	Mustela_putorius_furo
ENSGALG00000041972	POP4	92	68.182	ENSMPUG00000008041	-	100	68.182	Mustela_putorius_furo
ENSGALG00000041972	POP4	92	55.251	ENSMLUG00000010774	POP4	99	55.251	Myotis_lucifugus
ENSGALG00000041972	POP4	53	77.600	ENSMEUG00000003636	-	100	77.600	Notamacropus_eugenii
ENSGALG00000041972	POP4	83	72.222	ENSOPRG00000004736	POP4	99	72.222	Ochotona_princeps
ENSGALG00000041972	POP4	91	66.359	ENSODEG00000013025	POP4	98	68.599	Octodon_degus
ENSGALG00000041972	POP4	93	59.729	ENSONIG00000003458	pop4	98	59.729	Oreochromis_niloticus
ENSGALG00000041972	POP4	92	68.636	ENSOCUG00000015974	POP4	100	68.636	Oryctolagus_cuniculus
ENSGALG00000041972	POP4	93	56.054	ENSORLG00000020317	pop4	100	55.157	Oryzias_latipes
ENSGALG00000041972	POP4	92	56.109	ENSORLG00015011624	pop4	99	55.204	Oryzias_latipes_hsok
ENSGALG00000041972	POP4	92	57.014	ENSOMEG00000002538	pop4	99	56.561	Oryzias_melastigma
ENSGALG00000041972	POP4	92	66.972	ENSOGAG00000011168	POP4	99	66.972	Otolemur_garnettii
ENSGALG00000041972	POP4	92	70.136	ENSOARG00000004041	POP4	100	70.136	Ovis_aries
ENSGALG00000041972	POP4	92	69.091	ENSPPAG00000040372	POP4	100	69.091	Pan_paniscus
ENSGALG00000041972	POP4	92	68.182	ENSPPRG00000010502	POP4	100	68.182	Panthera_pardus
ENSGALG00000041972	POP4	92	68.182	ENSPTIG00000016598	POP4	100	68.182	Panthera_tigris_altaica
ENSGALG00000041972	POP4	92	69.091	ENSPTRG00000010779	POP4	100	69.091	Pan_troglodytes
ENSGALG00000041972	POP4	92	69.091	ENSPANG00000008546	POP4	100	69.091	Papio_anubis
ENSGALG00000041972	POP4	84	62.802	ENSPKIG00000004468	pop4	88	65.174	Paramormyrops_kingsleyae
ENSGALG00000041972	POP4	93	81.448	ENSPSIG00000015690	POP4	100	84.158	Pelodiscus_sinensis
ENSGALG00000041972	POP4	84	57.073	ENSPMGG00000008608	pop4	98	57.073	Periophthalmus_magnuspinnatus
ENSGALG00000041972	POP4	92	54.128	ENSPEMG00000019982	-	100	54.128	Peromyscus_maniculatus_bairdii
ENSGALG00000041972	POP4	92	66.364	ENSPEMG00000014034	-	94	70.297	Peromyscus_maniculatus_bairdii
ENSGALG00000041972	POP4	76	51.515	ENSPMAG00000006265	pop4	100	50.505	Petromyzon_marinus
ENSGALG00000041972	POP4	97	69.130	ENSPCIG00000024738	POP4	99	69.130	Phascolarctos_cinereus
ENSGALG00000041972	POP4	92	56.364	ENSPFOG00000000925	pop4	99	56.364	Poecilia_formosa
ENSGALG00000041972	POP4	92	55.909	ENSPLAG00000003161	pop4	99	55.909	Poecilia_latipinna
ENSGALG00000041972	POP4	92	56.364	ENSPMEG00000002475	pop4	99	56.364	Poecilia_mexicana
ENSGALG00000041972	POP4	93	54.955	ENSPREG00000022403	pop4	94	54.955	Poecilia_reticulata
ENSGALG00000041972	POP4	92	68.636	ENSPPYG00000009805	POP4	100	68.636	Pongo_abelii
ENSGALG00000041972	POP4	92	64.840	ENSPCAG00000007737	POP4	99	64.840	Procavia_capensis
ENSGALG00000041972	POP4	92	67.273	ENSPCOG00000018055	POP4	100	67.273	Propithecus_coquereli
ENSGALG00000041972	POP4	92	66.818	ENSPVAG00000006069	POP4	100	66.818	Pteropus_vampyrus
ENSGALG00000041972	POP4	92	59.817	ENSPNYG00000020038	pop4	99	59.817	Pundamilia_nyererei
ENSGALG00000041972	POP4	92	55.909	ENSPNAG00000005591	pop4	100	55.909	Pygocentrus_nattereri
ENSGALG00000041972	POP4	92	66.063	ENSRNOG00000027646	Pop4	100	66.063	Rattus_norvegicus
ENSGALG00000041972	POP4	74	65.714	ENSRBIG00000044769	POP4	89	70.290	Rhinopithecus_bieti
ENSGALG00000041972	POP4	92	68.636	ENSRROG00000028903	POP4	100	68.636	Rhinopithecus_roxellana
ENSGALG00000041972	POP4	53	32.374	YBR257W	-	50	32.374	Saccharomyces_cerevisiae
ENSGALG00000041972	POP4	92	68.636	ENSSBOG00000032445	POP4	100	68.636	Saimiri_boliviensis_boliviensis
ENSGALG00000041972	POP4	92	72.018	ENSSHAG00000016888	POP4	99	72.018	Sarcophilus_harrisii
ENSGALG00000041972	POP4	89	60.563	ENSSFOG00015014556	pop4	95	60.377	Scleropages_formosus
ENSGALG00000041972	POP4	92	56.561	ENSSMAG00000016611	pop4	99	56.109	Scophthalmus_maximus
ENSGALG00000041972	POP4	92	55.656	ENSSDUG00000019865	pop4	89	54.751	Seriola_dumerili
ENSGALG00000041972	POP4	92	56.109	ENSSLDG00000001763	pop4	99	55.204	Seriola_lalandi_dorsalis
ENSGALG00000041972	POP4	91	68.664	ENSSARG00000004748	POP4	100	68.664	Sorex_araneus
ENSGALG00000041972	POP4	92	58.824	ENSSPAG00000014364	pop4	99	57.919	Stegastes_partitus
ENSGALG00000041972	POP4	92	69.091	ENSSSCG00000002854	POP4	100	69.091	Sus_scrofa
ENSGALG00000041972	POP4	84	86.000	ENSTGUG00000008953	POP4	100	86.000	Taeniopygia_guttata
ENSGALG00000041972	POP4	85	59.606	ENSTNIG00000006401	pop4	100	59.606	Tetraodon_nigroviridis
ENSGALG00000041972	POP4	92	67.421	ENSTBEG00000002194	POP4	100	67.421	Tupaia_belangeri
ENSGALG00000041972	POP4	92	70.455	ENSTTRG00000005882	POP4	100	70.455	Tursiops_truncatus
ENSGALG00000041972	POP4	92	66.818	ENSUAMG00000003049	-	100	66.818	Ursus_americanus
ENSGALG00000041972	POP4	92	66.818	ENSUMAG00000007522	-	100	66.818	Ursus_maritimus
ENSGALG00000041972	POP4	94	64.758	ENSVVUG00000016876	-	79	64.758	Vulpes_vulpes
ENSGALG00000041972	POP4	91	68.519	ENSXETG00000017598	pop4	98	66.667	Xenopus_tropicalis
ENSGALG00000041972	POP4	93	55.357	ENSXCOG00000017695	pop4	94	54.911	Xiphophorus_couchianus
ENSGALG00000041972	POP4	93	55.357	ENSXMAG00000013862	pop4	94	54.911	Xiphophorus_maculatus