EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGALG00000042641 (Gene tree)
Gene ID
426566
Gene Symbol
PATL1
Alias
FLJ36874|Pat1b
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Gallus_gallus
Status
putative
Strand
Minus strand
Length
4688 bases
Position
chr5:233987-238674
Accession
426566
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGALP00000053147PAT1PF09770.91.9e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGALT00000050674PATL1-2012265-ENSGALP00000053147754 (aa)XP_015156942A0A1D5PJZ8
Gene Model
Click here to download ENSGALG00000042641's gene model file
Pathways
Pathway IDPathway NameSource
gga03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000042641's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGALG00000042641PATL110077.647ENSG00000166889PATL19977.778Homo_sapiens
ENSGALG00000042641PATL15436.842ENSG00000229474PATL29937.602Homo_sapiens
ENSGALG00000042641PATL15554.106ENSAPOG00000021290patl19847.786Acanthochromis_polyacanthus
ENSGALG00000042641PATL16835.741ENSAPOG00000022988patl25837.260Acanthochromis_polyacanthus
ENSGALG00000042641PATL110077.937ENSAMEG00000014215PATL19977.807Ailuropoda_melanoleuca
ENSGALG00000042641PATL15636.092ENSAMEG00000014997PATL27536.232Ailuropoda_melanoleuca
ENSGALG00000042641PATL19646.806ENSACIG00000005182patl19846.231Amphilophus_citrinellus
ENSGALG00000042641PATL15554.348ENSAOCG00000021993patl19546.598Amphiprion_ocellaris
ENSGALG00000042641PATL16834.133ENSAOCG00000023738patl25136.145Amphiprion_ocellaris
ENSGALG00000042641PATL16234.591ENSAPEG00000011299patl26135.266Amphiprion_percula
ENSGALG00000042641PATL16365.000ENSAPEG00000021391patl18066.667Amphiprion_percula
ENSGALG00000042641PATL19465.000ENSATEG00000002230patl18455.056Anabas_testudineus
ENSGALG00000042641PATL16433.401ENSATEG00000019567patl26134.977Anabas_testudineus
ENSGALG00000042641PATL17178.584ENSAPLG00000013394PATL110078.584Anas_platyrhynchos
ENSGALG00000042641PATL15440.097ENSAPLG00000003980PATL26438.849Anas_platyrhynchos
ENSGALG00000042641PATL19979.396ENSACAG00000006607PATL19979.003Anolis_carolinensis
ENSGALG00000042641PATL110078.039ENSANAG00000023078PATL19978.170Aotus_nancymaae
ENSGALG00000042641PATL16366.667ENSACLG00000005144patl18066.667Astatotilapia_calliptera
ENSGALG00000042641PATL16235.491ENSACLG00000010326patl25336.320Astatotilapia_calliptera
ENSGALG00000042641PATL16335.354ENSAMXG00000020293patl25736.957Astyanax_mexicanus
ENSGALG00000042641PATL19644.911ENSAMXG00000010731patl19947.880Astyanax_mexicanus
ENSGALG00000042641PATL110077.807ENSBTAG00000005913PATL19978.068Bos_taurus
ENSGALG00000042641PATL15737.011ENSCJAG00000002379PATL27237.288Callithrix_jacchus
ENSGALG00000042641PATL110078.039ENSCJAG00000016192PATL19978.170Callithrix_jacchus
ENSGALG00000042641PATL16534.731ENSCAFG00000013629PATL27436.235Canis_familiaris
ENSGALG00000042641PATL110078.721ENSCAFG00000007581PATL19978.590Canis_familiaris
ENSGALG00000042641PATL110078.721ENSCAFG00020001648PATL110078.590Canis_lupus_dingo
ENSGALG00000042641PATL16534.731ENSCAFG00020022169PATL27436.235Canis_lupus_dingo
ENSGALG00000042641PATL16037.418ENSCHIG00000026665PATL27437.381Capra_hircus
ENSGALG00000042641PATL110076.762ENSCHIG00000025913PATL19977.023Capra_hircus
ENSGALG00000042641PATL110078.170ENSTSYG00000012748PATL19578.170Carlito_syrichta
ENSGALG00000042641PATL110076.271ENSCAPG00000013668PATL19976.662Cavia_aperea
ENSGALG00000042641PATL110074.904ENSCPOG00000006827PATL19975.287Cavia_porcellus
ENSGALG00000042641PATL110078.170ENSCCAG00000023759PATL19978.301Cebus_capucinus
ENSGALG00000042641PATL110078.039ENSCATG00000009629PATL19978.170Cercocebus_atys
ENSGALG00000042641PATL15137.056ENSCLAG00000014407PATL27336.776Chinchilla_lanigera
ENSGALG00000042641PATL19976.974ENSCLAG00000003427PATL19977.105Chinchilla_lanigera
ENSGALG00000042641PATL19078.520ENSCSAG00000006095PATL19978.810Chlorocebus_sabaeus
ENSGALG00000042641PATL16883.413ENSCHOG00000001611PATL18283.413Choloepus_hoffmanni
ENSGALG00000042641PATL15439.709ENSCPBG00000006150PATL25939.130Chrysemys_picta_bellii
ENSGALG00000042641PATL18031.596ENSCING00000021535-9930.975Ciona_intestinalis
ENSGALG00000042641PATL19978.010ENSCANG00000039197PATL19979.412Colobus_angolensis_palliatus
ENSGALG00000042641PATL15736.697ENSCANG00000013856PATL27236.957Colobus_angolensis_palliatus
ENSGALG00000042641PATL110077.386ENSCGRG00001024927Patl19977.516Cricetulus_griseus_chok1gshd
ENSGALG00000042641PATL19977.368ENSCGRG00000000461Patl19977.500Cricetulus_griseus_crigri
ENSGALG00000042641PATL16433.742ENSCSEG00000009438patl25735.024Cynoglossus_semilaevis
ENSGALG00000042641PATL19747.619ENSCSEG00000008261patl17968.333Cynoglossus_semilaevis
ENSGALG00000042641PATL15832.462ENSCVAG00000016203patl26332.176Cyprinodon_variegatus
ENSGALG00000042641PATL19051.675ENSCVAG00000006664patl110045.649Cyprinodon_variegatus
ENSGALG00000042641PATL16933.874ENSDARG00000089567patl25637.150Danio_rerio
ENSGALG00000042641PATL110046.303ENSDARG00000017423patl110046.229Danio_rerio
ENSGALG00000042641PATL19972.668ENSDNOG00000038865PATL19979.342Dasypus_novemcinctus
ENSGALG00000042641PATL15437.709ENSDORG00000026649Patl27237.659Dipodomys_ordii
ENSGALG00000042641PATL110076.993ENSDORG00000000237Patl19977.124Dipodomys_ordii
ENSGALG00000042641PATL110077.575ENSEASG00005007963PATL19977.836Equus_asinus_asinus
ENSGALG00000042641PATL110077.575ENSECAG00000011411PATL19977.836Equus_caballus
ENSGALG00000042641PATL19446.792ENSELUG00000024249patl19449.924Esox_lucius
ENSGALG00000042641PATL110078.170ENSFCAG00000015573PATL19977.647Felis_catus
ENSGALG00000042641PATL15935.824ENSFCAG00000027170PATL27236.232Felis_catus
ENSGALG00000042641PATL15836.910ENSFALG00000009768PATL25539.078Ficedula_albicollis
ENSGALG00000042641PATL19987.417ENSFALG00000012150PATL19987.152Ficedula_albicollis
ENSGALG00000042641PATL19975.916ENSFDAG00000016128PATL19975.654Fukomys_damarensis
ENSGALG00000042641PATL15235.750ENSFDAG00000012242PATL27337.000Fukomys_damarensis
ENSGALG00000042641PATL16366.667ENSFHEG00000017790patl17961.429Fundulus_heteroclitus
ENSGALG00000042641PATL15833.113ENSGMOG00000005666patl29833.092Gadus_morhua
ENSGALG00000042641PATL16437.576ENSGALG00000002167PATL26036.673Gallus_gallus
ENSGALG00000042641PATL16035.789ENSGAFG00000019344patl25536.232Gambusia_affinis
ENSGALG00000042641PATL19463.235ENSGAFG00000006508patl19549.622Gambusia_affinis
ENSGALG00000042641PATL110047.308ENSGACG00000016448patl19948.774Gasterosteus_aculeatus
ENSGALG00000042641PATL110082.438ENSGAGG00000004461PATL19983.576Gopherus_agassizii
ENSGALG00000042641PATL15436.957ENSGGOG00000025923PATL27136.957Gorilla_gorilla
ENSGALG00000042641PATL110077.647ENSGGOG00000004335PATL19977.778Gorilla_gorilla
ENSGALG00000042641PATL16235.565ENSHBUG00000005929patl26235.915Haplochromis_burtoni
ENSGALG00000042641PATL16366.667ENSHBUG00000005365patl18066.667Haplochromis_burtoni
ENSGALG00000042641PATL110077.386ENSHGLG00000018173PATL19977.386Heterocephalus_glaber_female
ENSGALG00000042641PATL19976.253ENSHGLG00100003453PATL19976.253Heterocephalus_glaber_male
ENSGALG00000042641PATL19930.660ENSHCOG00000016754patl29530.311Hippocampus_comes
ENSGALG00000042641PATL19066.667ENSHCOG00000001898patl18050.549Hippocampus_comes
ENSGALG00000042641PATL15835.973ENSIPUG00000020692patl25735.613Ictalurus_punctatus
ENSGALG00000042641PATL15937.061ENSSTOG00000033848PATL27138.164Ictidomys_tridecemlineatus
ENSGALG00000042641PATL19878.486ENSSTOG00000013764PATL19878.619Ictidomys_tridecemlineatus
ENSGALG00000042641PATL19977.207ENSJJAG00000010135Patl19977.339Jaculus_jaculus
ENSGALG00000042641PATL18447.440ENSKMAG00000020848patl17349.698Kryptolebias_marmoratus
ENSGALG00000042641PATL16233.475ENSKMAG00000021275patl25434.783Kryptolebias_marmoratus
ENSGALG00000042641PATL19468.333ENSLBEG00000023617patl18068.333Labrus_bergylta
ENSGALG00000042641PATL15836.242ENSLBEG00000022344patl25336.715Labrus_bergylta
ENSGALG00000042641PATL19956.675ENSLACG00000004640PATL19956.675Latimeria_chalumnae
ENSGALG00000042641PATL19931.509ENSLACG00000005291-9731.630Latimeria_chalumnae
ENSGALG00000042641PATL110049.325ENSLOCG00000000717patl19949.816Lepisosteus_oculatus
ENSGALG00000042641PATL110077.415ENSLAFG00000015161PATL19977.676Loxodonta_africana
ENSGALG00000042641PATL15137.500ENSLAFG00000031124PATL27137.245Loxodonta_africana
ENSGALG00000042641PATL110078.039ENSMFAG00000040851PATL19978.170Macaca_fascicularis
ENSGALG00000042641PATL110078.039ENSMMUG00000017287PATL19978.170Macaca_mulatta
ENSGALG00000042641PATL110078.039ENSMNEG00000038692PATL19978.170Macaca_nemestrina
ENSGALG00000042641PATL110078.039ENSMLEG00000030044PATL19978.170Mandrillus_leucophaeus
ENSGALG00000042641PATL19644.140ENSMAMG00000003950patl19950.154Mastacembelus_armatus
ENSGALG00000042641PATL16234.728ENSMAMG00000013327patl26136.124Mastacembelus_armatus
ENSGALG00000042641PATL16235.491ENSMZEG00005014292patl25336.320Maylandia_zebra
ENSGALG00000042641PATL16366.667ENSMZEG00005013404patl18066.667Maylandia_zebra
ENSGALG00000042641PATL19395.708ENSMGAG00000003406PATL19995.708Meleagris_gallopavo
ENSGALG00000042641PATL15440.821ENSMGAG00000001309PATL26439.568Meleagris_gallopavo
ENSGALG00000042641PATL19560.333ENSMAUG00000012059Patl19658.391Mesocricetus_auratus
ENSGALG00000042641PATL110074.413ENSMICG00000004172PATL110077.642Microcebus_murinus
ENSGALG00000042641PATL110077.908ENSMOCG00000010087Patl19978.039Microtus_ochrogaster
ENSGALG00000042641PATL15836.343ENSMOCG00000015367Patl27236.318Microtus_ochrogaster
ENSGALG00000042641PATL15033.422ENSMMOG00000001299patl25931.796Mola_mola
ENSGALG00000042641PATL110047.190ENSMMOG00000013711patl110046.214Mola_mola
ENSGALG00000042641PATL15937.251ENSMODG00000017690PATL27137.709Monodelphis_domestica
ENSGALG00000042641PATL110080.840ENSMODG00000020201PATL19980.709Monodelphis_domestica
ENSGALG00000042641PATL15734.703ENSMALG00000008131patl25135.749Monopterus_albus
ENSGALG00000042641PATL19442.931ENSMALG00000018706patl19944.805Monopterus_albus
ENSGALG00000042641PATL110077.255MGP_CAROLIEiJ_G0022739Patl19977.386Mus_caroli
ENSGALG00000042641PATL110077.255ENSMUSG00000046139Patl19977.386Mus_musculus
ENSGALG00000042641PATL110077.516MGP_PahariEiJ_G0014233Patl19977.647Mus_pahari
ENSGALG00000042641PATL110077.386MGP_SPRETEiJ_G0023652Patl19977.516Mus_spretus
ENSGALG00000042641PATL110078.982ENSMPUG00000014607PATL19978.851Mustela_putorius_furo
ENSGALG00000042641PATL110075.654ENSMLUG00000011169PATL19975.654Myotis_lucifugus
ENSGALG00000042641PATL110077.633ENSNGAG00000003682Patl19977.373Nannospalax_galili
ENSGALG00000042641PATL16234.874ENSNBRG00000011745patl25935.915Neolamprologus_brichardi
ENSGALG00000042641PATL110075.098ENSNLEG00000013081PATL110075.229Nomascus_leucogenys
ENSGALG00000042641PATL15436.957ENSNLEG00000005673PATL27236.957Nomascus_leucogenys
ENSGALG00000042641PATL16485.758ENSMEUG00000009391PATL17485.758Notamacropus_eugenii
ENSGALG00000042641PATL16881.841ENSOPRG00000007963PATL17881.701Ochotona_princeps
ENSGALG00000042641PATL17077.551ENSODEG00000001792PATL19477.551Octodon_degus
ENSGALG00000042641PATL16235.639ENSONIG00000011519patl25336.804Oreochromis_niloticus
ENSGALG00000042641PATL16366.667ENSONIG00000004170patl110047.539Oreochromis_niloticus
ENSGALG00000042641PATL15284.949ENSOANG00000011117-9585.052Ornithorhynchus_anatinus
ENSGALG00000042641PATL15138.071ENSOANG00000001538-8438.519Ornithorhynchus_anatinus
ENSGALG00000042641PATL110077.778ENSOCUG00000002156PATL19977.908Oryctolagus_cuniculus
ENSGALG00000042641PATL15336.409ENSOCUG00000006339PATL27436.409Oryctolagus_cuniculus
ENSGALG00000042641PATL16234.395ENSORLG00000005780patl25435.904Oryzias_latipes
ENSGALG00000042641PATL16433.468ENSORLG00020016506patl25236.145Oryzias_latipes_hni
ENSGALG00000042641PATL16234.395ENSORLG00015014500patl25435.904Oryzias_latipes_hsok
ENSGALG00000042641PATL16234.681ENSOMEG00000021628patl25635.990Oryzias_melastigma
ENSGALG00000042641PATL110078.170ENSOGAG00000004351PATL19978.301Otolemur_garnettii
ENSGALG00000042641PATL15735.253ENSOGAG00000004709PATL27235.922Otolemur_garnettii
ENSGALG00000042641PATL19977.267ENSOARG00000012005PATL19577.530Ovis_aries
ENSGALG00000042641PATL15337.192ENSOARG00000003762PATL27237.685Ovis_aries
ENSGALG00000042641PATL15437.198ENSPPAG00000007221PATL27137.198Pan_paniscus
ENSGALG00000042641PATL110077.908ENSPPAG00000034275PATL19978.039Pan_paniscus
ENSGALG00000042641PATL19978.158ENSPPRG00000020639PATL19977.632Panthera_pardus
ENSGALG00000042641PATL15935.604ENSPPRG00000004279PATL27235.990Panthera_pardus
ENSGALG00000042641PATL110078.170ENSPTIG00000019298PATL19977.647Panthera_tigris_altaica
ENSGALG00000042641PATL15935.824ENSPTIG00000018964PATL27236.232Panthera_tigris_altaica
ENSGALG00000042641PATL15436.957ENSPTRG00000041536PATL27136.957Pan_troglodytes
ENSGALG00000042641PATL110073.062ENSPTRG00000003697PATL110072.668Pan_troglodytes
ENSGALG00000042641PATL110078.039ENSPANG00000035620PATL19978.170Papio_anubis
ENSGALG00000042641PATL110046.914ENSPKIG00000016224patl19947.485Paramormyrops_kingsleyae
ENSGALG00000042641PATL15437.709ENSPKIG00000016887patl25537.352Paramormyrops_kingsleyae
ENSGALG00000042641PATL110082.199ENSPSIG00000016206PATL19581.913Pelodiscus_sinensis
ENSGALG00000042641PATL15436.983ENSPSIG00000017690PATL29337.722Pelodiscus_sinensis
ENSGALG00000042641PATL16133.895ENSPMGG00000014550patl26535.499Periophthalmus_magnuspinnatus
ENSGALG00000042641PATL15555.314ENSPMGG00000002644patl19947.009Periophthalmus_magnuspinnatus
ENSGALG00000042641PATL110077.647ENSPEMG00000014215Patl19977.778Peromyscus_maniculatus_bairdii
ENSGALG00000042641PATL15535.446ENSPEMG00000016509Patl27036.735Peromyscus_maniculatus_bairdii
ENSGALG00000042641PATL15835.477ENSPCIG00000018256PATL27636.946Phascolarctos_cinereus
ENSGALG00000042641PATL110080.709ENSPCIG00000010852PATL19980.577Phascolarctos_cinereus
ENSGALG00000042641PATL110046.014ENSPFOG00000007768patl19945.978Poecilia_formosa
ENSGALG00000042641PATL15836.242ENSPFOG00000007305patl25635.849Poecilia_formosa
ENSGALG00000042641PATL15836.242ENSPLAG00000020713patl25635.849Poecilia_latipinna
ENSGALG00000042641PATL16855.024ENSPLAG00000018465patl19149.849Poecilia_latipinna
ENSGALG00000042641PATL15836.242ENSPMEG00000018942patl25635.849Poecilia_mexicana
ENSGALG00000042641PATL19949.694ENSPMEG00000006555patl19149.849Poecilia_mexicana
ENSGALG00000042641PATL18948.174ENSPREG00000003874patl18648.542Poecilia_reticulata
ENSGALG00000042641PATL110078.301ENSPPYG00000003230PATL19978.431Pongo_abelii
ENSGALG00000042641PATL110078.170ENSPCOG00000020770PATL19978.301Propithecus_coquereli
ENSGALG00000042641PATL16335.918ENSPCOG00000000295PATL29939.011Propithecus_coquereli
ENSGALG00000042641PATL18576.198ENSPVAG00000015239PATL19975.385Pteropus_vampyrus
ENSGALG00000042641PATL16235.146ENSPNYG00000017381patl26235.782Pundamilia_nyererei
ENSGALG00000042641PATL17953.823ENSPNYG00000018936patl19653.799Pundamilia_nyererei
ENSGALG00000042641PATL16335.318ENSPNAG00000002315patl25737.198Pygocentrus_nattereri
ENSGALG00000042641PATL110044.828ENSPNAG00000017907patl19946.796Pygocentrus_nattereri
ENSGALG00000042641PATL110077.255ENSRNOG00000021052Patl19977.386Rattus_norvegicus
ENSGALG00000042641PATL110068.875ENSRBIG00000032263PATL19968.375Rhinopithecus_bieti
ENSGALG00000042641PATL110078.039ENSRROG00000032861PATL19978.170Rhinopithecus_roxellana
ENSGALG00000042641PATL110078.039ENSSBOG00000025195PATL19978.170Saimiri_boliviensis_boliviensis
ENSGALG00000042641PATL110080.313ENSSHAG00000004309PATL19980.183Sarcophilus_harrisii
ENSGALG00000042641PATL110044.970ENSSFOG00015009614patl19947.555Scleropages_formosus
ENSGALG00000042641PATL15837.168ENSSFOG00015000720patl29530.446Scleropages_formosus
ENSGALG00000042641PATL16234.681ENSSMAG00000017262patl26435.714Scophthalmus_maximus
ENSGALG00000042641PATL19266.129ENSSMAG00000009482patl19950.077Scophthalmus_maximus
ENSGALG00000042641PATL16235.443ENSSDUG00000022927patl25436.232Seriola_dumerili
ENSGALG00000042641PATL19468.333ENSSDUG00000005362patl17968.333Seriola_dumerili
ENSGALG00000042641PATL16236.518ENSSLDG00000017922patl25937.530Seriola_lalandi_dorsalis
ENSGALG00000042641PATL19466.667ENSSLDG00000019146patl17966.667Seriola_lalandi_dorsalis
ENSGALG00000042641PATL17980.153ENSSARG00000009600PATL17980.153Sorex_araneus
ENSGALG00000042641PATL15137.975ENSSARG00000009047PATL27636.709Sorex_araneus
ENSGALG00000042641PATL110081.926ENSSPUG00000009453PATL19981.530Sphenodon_punctatus
ENSGALG00000042641PATL18654.106ENSSPAG00000003187patl19846.173Stegastes_partitus
ENSGALG00000042641PATL16834.026ENSSPAG00000004784patl26335.981Stegastes_partitus
ENSGALG00000042641PATL110077.676ENSSSCG00000013124PATL19977.937Sus_scrofa
ENSGALG00000042641PATL19986.974ENSTGUG00000006222PATL19985.921Taeniopygia_guttata
ENSGALG00000042641PATL15238.384ENSTGUG00000004619-9637.722Taeniopygia_guttata
ENSGALG00000042641PATL16035.000ENSTRUG00000005647patl25636.538Takifugu_rubripes
ENSGALG00000042641PATL19461.667ENSTRUG00000000709patl19943.727Takifugu_rubripes
ENSGALG00000042641PATL19073.953ENSTBEG00000000796PATL19074.186Tupaia_belangeri
ENSGALG00000042641PATL17283.632ENSTTRG00000009389PATL18283.505Tursiops_truncatus
ENSGALG00000042641PATL15635.566ENSUAMG00000018533PATL27135.593Ursus_americanus
ENSGALG00000042641PATL19978.581ENSUMAG00000018634PATL19978.841Ursus_maritimus
ENSGALG00000042641PATL15635.797ENSUMAG00000007738PATL27136.077Ursus_maritimus
ENSGALG00000042641PATL16182.424ENSVPAG00000009224PATL17282.424Vicugna_pacos
ENSGALG00000042641PATL16534.930ENSVVUG00000011576PATL27436.471Vulpes_vulpes
ENSGALG00000042641PATL19978.712ENSVVUG00000016668PATL19978.841Vulpes_vulpes
ENSGALG00000042641PATL15438.107ENSXETG00000014167patl28733.333Xenopus_tropicalis
ENSGALG00000042641PATL16267.308ENSXCOG00000010808patl19767.308Xiphophorus_couchianus
ENSGALG00000042641PATL15836.465ENSXMAG00000018464patl25536.085Xiphophorus_maculatus
ENSGALG00000042641PATL19468.333ENSXMAG00000013834patl18949.470Xiphophorus_maculatus

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