EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000043476 (Gene tree)
Gene ID: 396265
Gene Symbol: -
Alias: ARF/CPS3
Full Name: -
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 6800 bases
Position: chr1:1096008-1102807
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000046064	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000056542	-	514	-	ENSGALP00000046064	152 (aa)	-	A0A1D5P090

Gene Model

Click here to download ENSGALG00000043476's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000043476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000043476	-	100	97.368	ENSCAFG00000001726	ARF5	84	97.368	Canis_familiaris
ENSGALG00000043476	-	99	91.391	ENSELUG00000019582	-	84	91.391	Esox_lucius
ENSGALG00000043476	-	100	91.447	ENSKMAG00000008864	-	90	91.447	Kryptolebias_marmoratus
ENSGALG00000043476	-	99	76.667	ENSLACG00000012168	-	96	76.667	Latimeria_chalumnae
ENSGALG00000043476	-	87	98.485	ENSMGAG00000008562	-	100	98.485	Meleagris_gallopavo
ENSGALG00000043476	-	100	91.447	ENSORLG00020003354	-	89	91.447	Oryzias_latipes_hni
ENSGALG00000043476	-	100	91.447	ENSORLG00015002471	-	76	91.447	Oryzias_latipes_hsok
ENSGALG00000043476	-	78	89.831	ENSPMAG00000005571	-	87	89.831	Petromyzon_marinus
ENSGALG00000043476	-	100	90.132	ENSSDUG00000014675	-	84	90.132	Seriola_dumerili
ENSGALG00000043476	-	73	92.793	ENSSLDG00000005491	-	98	92.793	Seriola_lalandi_dorsalis
ENSGALG00000043476	-	100	92.105	ENSSPUG00000004465	-	84	92.105	Sphenodon_punctatus
ENSGALG00000043476	-	100	89.474	ENSTBEG00000007415	-	100	89.474	Tupaia_belangeri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	21873635.	IBA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005794	Golgi apparatus	21873635.	IBA	Component
GO:0005886	plasma membrane	21873635.	IBA	Component
GO:0005886	plasma membrane	-	ISS	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	21873635.	IBA	Process
GO:0006893	Golgi to plasma membrane transport	21873635.	IBA	Process
GO:0016192	vesicle-mediated transport	21873635.	IBA	Process