EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000043593 (Gene tree)
Gene ID: 419036
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Plus strand
Length: 17437 bases
Position: chr1:7384177-7401613
Accession: 419036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000070276	PRP4	PF08799.11	5e-13	1	1
ENSGALP00000055559	PRP4	PF08799.11	5.2e-13	1	1
ENSGALP00000070276	Prp18	PF02840.15	2e-62	1	1
ENSGALP00000055559	Prp18	PF02840.15	2.5e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000060233	-	2135	XM_004937491	ENSGALP00000055559	351 (aa)	XP_004937548	A0A1D5PRN2
ENSGALT00000092510	-	2372	-	ENSGALP00000070276	342 (aa)	XP_417229	UPI00003A9504

Gene Model

Click here to download ENSGALG00000043593's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000043593's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000043593	-	100	92.398	ENSG00000165630	PRPF18	100	92.398	Homo_sapiens
ENSGALG00000043593	-	100	84.503	ENSAPOG00000024177	prpf18	100	84.503	Acanthochromis_polyacanthus
ENSGALG00000043593	-	100	91.813	ENSAMEG00000013591	-	100	91.813	Ailuropoda_melanoleuca
ENSGALG00000043593	-	100	84.503	ENSACIG00000001186	prpf18	100	84.503	Amphilophus_citrinellus
ENSGALG00000043593	-	98	84.179	ENSAOCG00000006572	prpf18	94	82.456	Amphiprion_ocellaris
ENSGALG00000043593	-	100	84.503	ENSAPEG00000004564	prpf18	100	84.503	Amphiprion_percula
ENSGALG00000043593	-	100	83.041	ENSATEG00000000303	prpf18	100	83.041	Anabas_testudineus
ENSGALG00000043593	-	99	98.824	ENSAPLG00000003387	-	99	98.824	Anas_platyrhynchos
ENSGALG00000043593	-	100	91.860	ENSACAG00000000818	-	100	91.860	Anolis_carolinensis
ENSGALG00000043593	-	100	92.398	ENSANAG00000037445	-	100	92.398	Aotus_nancymaae
ENSGALG00000043593	-	100	83.918	ENSACLG00000026296	prpf18	100	83.918	Astatotilapia_calliptera
ENSGALG00000043593	-	100	84.046	ENSAMXG00000012848	prpf18	100	83.761	Astyanax_mexicanus
ENSGALG00000043593	-	100	91.520	ENSBTAG00000017244	PRPF18	100	91.520	Bos_taurus
ENSGALG00000043593	-	97	37.791	WBGene00009320	F32B6.3	96	37.429	Caenorhabditis_elegans
ENSGALG00000043593	-	100	92.398	ENSCJAG00000009432	-	100	92.398	Callithrix_jacchus
ENSGALG00000043593	-	100	91.813	ENSCAFG00000004735	-	100	91.813	Canis_familiaris
ENSGALG00000043593	-	100	91.813	ENSCAFG00020007712	-	100	91.813	Canis_lupus_dingo
ENSGALG00000043593	-	100	91.520	ENSCHIG00000000499	-	100	91.520	Capra_hircus
ENSGALG00000043593	-	100	91.813	ENSTSYG00000003517	-	100	91.813	Carlito_syrichta
ENSGALG00000043593	-	100	92.398	ENSCPOG00000021069	-	100	92.398	Cavia_porcellus
ENSGALG00000043593	-	100	92.398	ENSCCAG00000036822	-	100	92.398	Cebus_capucinus
ENSGALG00000043593	-	100	81.871	ENSCATG00000016633	-	100	81.871	Cercocebus_atys
ENSGALG00000043593	-	100	91.813	ENSCLAG00000011770	-	100	91.813	Chinchilla_lanigera
ENSGALG00000043593	-	100	92.023	ENSCSAG00000013109	-	100	92.023	Chlorocebus_sabaeus
ENSGALG00000043593	-	100	90.685	ENSCPBG00000003100	-	100	91.233	Chrysemys_picta_bellii
ENSGALG00000043593	-	99	55.425	ENSCING00000020481	-	97	54.624	Ciona_intestinalis
ENSGALG00000043593	-	99	54.971	ENSCSAVG00000010546	-	99	54.839	Ciona_savignyi
ENSGALG00000043593	-	100	92.105	ENSCANG00000034900	-	100	92.105	Colobus_angolensis_palliatus
ENSGALG00000043593	-	100	92.398	ENSCGRG00001023665	Prpf18	100	92.398	Cricetulus_griseus_chok1gshd
ENSGALG00000043593	-	100	92.398	ENSCGRG00000014690	Prpf18	100	92.398	Cricetulus_griseus_crigri
ENSGALG00000043593	-	100	81.871	ENSCSEG00000005536	prpf18	99	81.871	Cynoglossus_semilaevis
ENSGALG00000043593	-	100	83.041	ENSCVAG00000012401	prpf18	100	83.041	Cyprinodon_variegatus
ENSGALG00000043593	-	100	84.503	ENSDARG00000058306	prpf18	100	84.503	Danio_rerio
ENSGALG00000043593	-	100	92.105	ENSDNOG00000035607	-	100	92.105	Dasypus_novemcinctus
ENSGALG00000043593	-	100	91.520	ENSDORG00000000858	Prpf18	100	91.520	Dipodomys_ordii
ENSGALG00000043593	-	99	51.327	FBgn0027784	Prp18	98	51.327	Drosophila_melanogaster
ENSGALG00000043593	-	100	81.871	ENSETEG00000015060	-	100	81.871	Echinops_telfairi
ENSGALG00000043593	-	100	67.435	ENSEBUG00000016502	prpf18	99	66.282	Eptatretus_burgeri
ENSGALG00000043593	-	100	92.105	ENSEASG00005019373	-	100	92.105	Equus_asinus_asinus
ENSGALG00000043593	-	100	92.105	ENSECAG00000006997	PRPF18	100	92.105	Equus_caballus
ENSGALG00000043593	-	92	57.595	ENSEEUG00000001171	-	100	57.595	Erinaceus_europaeus
ENSGALG00000043593	-	100	81.633	ENSELUG00000022190	prpf18	100	81.633	Esox_lucius
ENSGALG00000043593	-	100	91.813	ENSFCAG00000004436	-	100	91.813	Felis_catus
ENSGALG00000043593	-	93	98.154	ENSFALG00000001912	-	97	98.154	Ficedula_albicollis
ENSGALG00000043593	-	99	61.159	ENSFDAG00000010713	-	97	61.159	Fukomys_damarensis
ENSGALG00000043593	-	93	94.671	ENSFDAG00000014026	-	99	94.671	Fukomys_damarensis
ENSGALG00000043593	-	80	87.546	ENSFHEG00000020125	prpf18	98	87.640	Fundulus_heteroclitus
ENSGALG00000043593	-	99	79.765	ENSGMOG00000012210	prpf18	99	79.765	Gadus_morhua
ENSGALG00000043593	-	100	82.164	ENSGAFG00000006034	prpf18	100	82.164	Gambusia_affinis
ENSGALG00000043593	-	100	80.994	ENSGACG00000012232	prpf18	100	80.994	Gasterosteus_aculeatus
ENSGALG00000043593	-	100	94.302	ENSGAGG00000016878	-	100	94.302	Gopherus_agassizii
ENSGALG00000043593	-	93	91.385	ENSGGOG00000025188	-	96	91.772	Gorilla_gorilla
ENSGALG00000043593	-	100	83.918	ENSHBUG00000010264	prpf18	100	83.918	Haplochromis_burtoni
ENSGALG00000043593	-	100	91.813	ENSHGLG00000018534	PRPF18	100	91.813	Heterocephalus_glaber_female
ENSGALG00000043593	-	93	94.357	ENSHGLG00100012161	-	98	94.357	Heterocephalus_glaber_male
ENSGALG00000043593	-	100	83.041	ENSHCOG00000015987	prpf18	100	83.041	Hippocampus_comes
ENSGALG00000043593	-	100	82.720	ENSIPUG00000007432	prpf18	100	83.853	Ictalurus_punctatus
ENSGALG00000043593	-	100	91.228	ENSSTOG00000008735	-	100	91.228	Ictidomys_tridecemlineatus
ENSGALG00000043593	-	100	67.055	ENSJJAG00000015191	-	100	67.055	Jaculus_jaculus
ENSGALG00000043593	-	100	92.398	ENSJJAG00000024041	-	100	92.398	Jaculus_jaculus
ENSGALG00000043593	-	100	83.626	ENSKMAG00000012124	prpf18	100	83.626	Kryptolebias_marmoratus
ENSGALG00000043593	-	96	83.180	ENSLBEG00000028466	prpf18	98	81.682	Labrus_bergylta
ENSGALG00000043593	-	100	87.135	ENSLACG00000009885	prpf18	100	87.135	Latimeria_chalumnae
ENSGALG00000043593	-	100	89.181	ENSLOCG00000016736	prpf18	100	89.181	Lepisosteus_oculatus
ENSGALG00000043593	-	100	92.398	ENSLAFG00000007753	-	100	92.398	Loxodonta_africana
ENSGALG00000043593	-	100	92.398	ENSMFAG00000000540	-	100	92.398	Macaca_fascicularis
ENSGALG00000043593	-	100	92.398	ENSMMUG00000015071	PRPF18	100	92.398	Macaca_mulatta
ENSGALG00000043593	-	100	92.398	ENSMNEG00000024679	-	100	92.398	Macaca_nemestrina
ENSGALG00000043593	-	100	77.193	ENSMLEG00000031715	-	100	77.193	Mandrillus_leucophaeus
ENSGALG00000043593	-	100	83.333	ENSMAMG00000006610	prpf18	100	83.333	Mastacembelus_armatus
ENSGALG00000043593	-	100	83.918	ENSMZEG00005019392	prpf18	100	83.918	Maylandia_zebra
ENSGALG00000043593	-	100	100.000	ENSMGAG00000005023	-	100	100.000	Meleagris_gallopavo
ENSGALG00000043593	-	100	92.105	ENSMICG00000006572	-	100	92.105	Microcebus_murinus
ENSGALG00000043593	-	100	92.398	ENSMOCG00000021468	Prpf18	100	92.398	Microtus_ochrogaster
ENSGALG00000043593	-	100	83.333	ENSMMOG00000013012	prpf18	100	83.333	Mola_mola
ENSGALG00000043593	-	100	82.164	ENSMODG00000024043	-	100	82.164	Monodelphis_domestica
ENSGALG00000043593	-	96	89.941	ENSMODG00000016902	-	92	89.941	Monodelphis_domestica
ENSGALG00000043593	-	100	75.581	ENSMALG00000005486	prpf18	100	76.163	Monopterus_albus
ENSGALG00000043593	-	100	91.813	MGP_CAROLIEiJ_G0023143	Prpf18	100	95.890	Mus_caroli
ENSGALG00000043593	-	100	91.520	ENSMUSG00000039449	Prpf18	100	95.890	Mus_musculus
ENSGALG00000043593	-	100	92.105	MGP_PahariEiJ_G0019203	Prpf18	100	95.890	Mus_pahari
ENSGALG00000043593	-	100	91.228	MGP_SPRETEiJ_G0024061	Prpf18	100	95.890	Mus_spretus
ENSGALG00000043593	-	100	91.520	ENSMPUG00000000938	-	100	91.520	Mustela_putorius_furo
ENSGALG00000043593	-	100	91.520	ENSMLUG00000009200	-	100	91.520	Myotis_lucifugus
ENSGALG00000043593	-	100	91.813	ENSNGAG00000012500	-	100	91.813	Nannospalax_galili
ENSGALG00000043593	-	67	88.261	ENSNGAG00000023550	-	82	88.261	Nannospalax_galili
ENSGALG00000043593	-	100	83.626	ENSNBRG00000001778	prpf18	100	83.626	Neolamprologus_brichardi
ENSGALG00000043593	-	100	92.398	ENSNLEG00000012186	-	100	92.398	Nomascus_leucogenys
ENSGALG00000043593	-	100	64.327	ENSMEUG00000005032	-	100	64.327	Notamacropus_eugenii
ENSGALG00000043593	-	77	72.830	ENSOPRG00000002153	-	100	72.830	Ochotona_princeps
ENSGALG00000043593	-	100	92.105	ENSODEG00000003770	-	100	92.105	Octodon_degus
ENSGALG00000043593	-	98	83.284	ENSONIG00000014854	prpf18	96	83.284	Oreochromis_niloticus
ENSGALG00000043593	-	100	92.398	ENSOANG00000015404	-	100	92.398	Ornithorhynchus_anatinus
ENSGALG00000043593	-	100	92.105	ENSOCUG00000027756	-	96	93.272	Oryctolagus_cuniculus
ENSGALG00000043593	-	100	80.912	ENSORLG00000010293	prpf18	100	80.857	Oryzias_latipes
ENSGALG00000043593	-	100	82.456	ENSORLG00020001530	prpf18	100	82.456	Oryzias_latipes_hni
ENSGALG00000043593	-	100	82.164	ENSORLG00015013705	prpf18	100	82.164	Oryzias_latipes_hsok
ENSGALG00000043593	-	100	84.211	ENSOMEG00000009167	prpf18	100	84.211	Oryzias_melastigma
ENSGALG00000043593	-	100	91.520	ENSOGAG00000007294	-	100	91.520	Otolemur_garnettii
ENSGALG00000043593	-	100	91.168	ENSOARG00000006243	-	100	91.168	Ovis_aries
ENSGALG00000043593	-	100	92.398	ENSPPAG00000041959	-	100	92.398	Pan_paniscus
ENSGALG00000043593	-	100	91.813	ENSPPRG00000000107	-	100	91.813	Panthera_pardus
ENSGALG00000043593	-	100	92.105	ENSPTIG00000021094	-	100	92.105	Panthera_tigris_altaica
ENSGALG00000043593	-	100	92.398	ENSPTRG00000002306	PRPF18	100	92.398	Pan_troglodytes
ENSGALG00000043593	-	100	92.105	ENSPANG00000023346	-	100	92.105	Papio_anubis
ENSGALG00000043593	-	86	98.113	ENSPKIG00000014128	prpf18	96	82.621	Paramormyrops_kingsleyae
ENSGALG00000043593	-	100	94.444	ENSPSIG00000016064	-	100	94.444	Pelodiscus_sinensis
ENSGALG00000043593	-	100	78.070	ENSPMGG00000016486	prpf18	100	78.070	Periophthalmus_magnuspinnatus
ENSGALG00000043593	-	100	92.105	ENSPEMG00000013704	Prpf18	100	92.105	Peromyscus_maniculatus_bairdii
ENSGALG00000043593	-	100	74.277	ENSPMAG00000000204	prpf18	100	74.277	Petromyzon_marinus
ENSGALG00000043593	-	93	92.923	ENSPCIG00000012963	-	99	93.354	Phascolarctos_cinereus
ENSGALG00000043593	-	100	81.197	ENSPFOG00000017611	prpf18	100	81.143	Poecilia_formosa
ENSGALG00000043593	-	100	82.749	ENSPLAG00000000369	prpf18	100	82.749	Poecilia_latipinna
ENSGALG00000043593	-	100	82.749	ENSPMEG00000005183	prpf18	100	82.749	Poecilia_mexicana
ENSGALG00000043593	-	100	82.749	ENSPREG00000015232	prpf18	100	82.749	Poecilia_reticulata
ENSGALG00000043593	-	100	92.105	ENSPPYG00000002101	PRPF18	100	92.105	Pongo_abelii
ENSGALG00000043593	-	100	74.269	ENSPCAG00000010833	-	100	74.269	Procavia_capensis
ENSGALG00000043593	-	100	85.380	ENSPCOG00000013057	-	100	85.380	Propithecus_coquereli
ENSGALG00000043593	-	100	56.433	ENSPVAG00000002947	-	100	56.433	Pteropus_vampyrus
ENSGALG00000043593	-	100	83.626	ENSPNYG00000003554	prpf18	100	83.626	Pundamilia_nyererei
ENSGALG00000043593	-	100	85.470	ENSPNAG00000023151	prpf18	100	85.470	Pygocentrus_nattereri
ENSGALG00000043593	-	100	92.105	ENSRNOG00000018396	Prpf18	100	92.105	Rattus_norvegicus
ENSGALG00000043593	-	100	91.813	ENSRBIG00000028028	-	100	91.813	Rhinopithecus_bieti
ENSGALG00000043593	-	100	92.105	ENSRROG00000040695	-	100	92.105	Rhinopithecus_roxellana
ENSGALG00000043593	-	100	92.398	ENSSBOG00000034482	-	100	92.398	Saimiri_boliviensis_boliviensis
ENSGALG00000043593	-	100	93.567	ENSSHAG00000016463	-	100	93.567	Sarcophilus_harrisii
ENSGALG00000043593	-	100	76.901	ENSSHAG00000009669	-	100	76.901	Sarcophilus_harrisii
ENSGALG00000043593	-	77	44.528	ENSSFOG00015021154	-	89	48.498	Scleropages_formosus
ENSGALG00000043593	-	98	83.478	ENSSFOG00015022118	prpf18	100	77.522	Scleropages_formosus
ENSGALG00000043593	-	100	81.871	ENSSMAG00000005308	prpf18	100	81.871	Scophthalmus_maximus
ENSGALG00000043593	-	100	83.333	ENSSDUG00000015428	prpf18	100	83.333	Seriola_dumerili
ENSGALG00000043593	-	100	83.333	ENSSLDG00000023989	prpf18	100	83.333	Seriola_lalandi_dorsalis
ENSGALG00000043593	-	100	62.865	ENSSARG00000005307	-	100	62.865	Sorex_araneus
ENSGALG00000043593	-	100	93.275	ENSSPUG00000002619	-	100	93.275	Sphenodon_punctatus
ENSGALG00000043593	-	100	83.333	ENSSPAG00000019502	prpf18	100	83.333	Stegastes_partitus
ENSGALG00000043593	-	100	91.813	ENSSSCG00000026354	-	100	91.813	Sus_scrofa
ENSGALG00000043593	-	100	98.246	ENSTGUG00000002286	-	100	98.246	Taeniopygia_guttata
ENSGALG00000043593	-	100	82.749	ENSTRUG00000011278	prpf18	100	82.749	Takifugu_rubripes
ENSGALG00000043593	-	100	84.503	ENSTNIG00000000911	prpf18	100	84.503	Tetraodon_nigroviridis
ENSGALG00000043593	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSGALG00000043593	-	100	92.690	ENSTTRG00000011117	PRPF18	100	92.690	Tursiops_truncatus
ENSGALG00000043593	-	91	94.212	ENSUAMG00000001815	-	93	94.212	Ursus_americanus
ENSGALG00000043593	-	100	87.135	ENSUMAG00000012329	-	100	87.135	Ursus_maritimus
ENSGALG00000043593	-	100	86.257	ENSVPAG00000011486	-	100	86.257	Vicugna_pacos
ENSGALG00000043593	-	100	91.813	ENSVVUG00000005453	-	100	91.813	Vulpes_vulpes
ENSGALG00000043593	-	100	80.290	ENSXETG00000024057	prpf18	100	80.290	Xenopus_tropicalis
ENSGALG00000043593	-	100	81.395	ENSXCOG00000020414	prpf18	100	81.395	Xiphophorus_couchianus
ENSGALG00000043593	-	100	82.164	ENSXMAG00000004713	prpf18	91	82.164	Xiphophorus_maculatus