EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSGALG00000043597 (Gene tree)
Gene ID: 395449
Gene Symbol: RAD54B
Alias: -
Full Name: Gallus gallus RAD54 homolog B (RAD54B)%2C mRNA.
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 59368 bases
Position: chr2:125967941-126027308
Accession: NM_204710
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000052510	ResIII	PF04851.15	3.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000055136	-	3384	-	ENSGALP00000052510	918 (aa)	XP_015138397	A0A1D5PI78

Gene Model

Click here to download ENSGALG00000043597's gene model file

Pathways

Pathway ID	Pathway Name	Source
gga03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000043597's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000043597	RAD54B	99	68.689	ENSG00000197275	RAD54B	100	68.689	Homo_sapiens
ENSGALG00000043597	RAD54B	79	74.176	ENSG00000265817	FSBP	100	74.176	Homo_sapiens
ENSGALG00000043597	RAD54B	99	67.394	ENSAMEG00000005834	-	99	67.394	Ailuropoda_melanoleuca
ENSGALG00000043597	RAD54B	89	68.966	ENSACIG00000013005	rad54b	89	61.761	Amphilophus_citrinellus
ENSGALG00000043597	RAD54B	99	56.476	ENSAOCG00000008523	rad54b	99	56.476	Amphiprion_ocellaris
ENSGALG00000043597	RAD54B	99	56.441	ENSAPEG00000001673	rad54b	99	56.503	Amphiprion_percula
ENSGALG00000043597	RAD54B	99	56.707	ENSATEG00000001527	rad54b	99	56.707	Anabas_testudineus
ENSGALG00000043597	RAD54B	100	90.305	ENSAPLG00000014366	-	100	90.305	Anas_platyrhynchos
ENSGALG00000043597	RAD54B	87	75.594	ENSACAG00000003671	-	99	75.594	Anolis_carolinensis
ENSGALG00000043597	RAD54B	71	74.422	ENSANAG00000019528	-	100	74.422	Aotus_nancymaae
ENSGALG00000043597	RAD54B	99	56.710	ENSACLG00000007826	rad54b	99	56.710	Astatotilapia_calliptera
ENSGALG00000043597	RAD54B	85	61.335	ENSAMXG00000039985	rad54b	94	61.202	Astyanax_mexicanus
ENSGALG00000043597	RAD54B	99	66.306	ENSBTAG00000000632	RAD54B	99	66.306	Bos_taurus
ENSGALG00000043597	RAD54B	79	34.641	WBGene00013792	Y116A8C.13	70	40.255	Caenorhabditis_elegans
ENSGALG00000043597	RAD54B	99	67.791	ENSCJAG00000000080	-	100	73.764	Callithrix_jacchus
ENSGALG00000043597	RAD54B	99	67.760	ENSCAFG00000009179	RAD54B	99	67.760	Canis_familiaris
ENSGALG00000043597	RAD54B	99	67.650	ENSCAFG00020012084	-	99	67.650	Canis_lupus_dingo
ENSGALG00000043597	RAD54B	99	65.980	ENSCHIG00000008230	-	99	65.980	Capra_hircus
ENSGALG00000043597	RAD54B	99	68.078	ENSTSYG00000013234	-	99	68.078	Carlito_syrichta
ENSGALG00000043597	RAD54B	100	67.822	ENSCPOG00000011643	-	100	67.822	Cavia_porcellus
ENSGALG00000043597	RAD54B	99	67.896	ENSCCAG00000011754	-	100	73.764	Cebus_capucinus
ENSGALG00000043597	RAD54B	99	68.581	ENSCATG00000030661	-	100	73.764	Cercocebus_atys
ENSGALG00000043597	RAD54B	99	67.721	ENSCLAG00000010476	-	100	67.721	Chinchilla_lanigera
ENSGALG00000043597	RAD54B	99	68.364	ENSCSAG00000012712	-	100	68.364	Chlorocebus_sabaeus
ENSGALG00000043597	RAD54B	99	78.346	ENSCPBG00000003204	-	99	78.681	Chrysemys_picta_bellii
ENSGALG00000043597	RAD54B	99	68.472	ENSCANG00000017939	-	100	73.901	Colobus_angolensis_palliatus
ENSGALG00000043597	RAD54B	99	66.048	ENSCGRG00001020184	Rad54b	99	66.048	Cricetulus_griseus_chok1gshd
ENSGALG00000043597	RAD54B	99	65.464	ENSCGRG00000016752	Rad54b	99	65.464	Cricetulus_griseus_crigri
ENSGALG00000043597	RAD54B	91	77.778	ENSCSEG00000001601	rad54b	98	77.778	Cynoglossus_semilaevis
ENSGALG00000043597	RAD54B	99	58.824	ENSCVAG00000009200	rad54b	99	58.824	Cyprinodon_variegatus
ENSGALG00000043597	RAD54B	99	55.037	ENSDARG00000092134	rad54b	99	62.212	Danio_rerio
ENSGALG00000043597	RAD54B	99	67.686	ENSDNOG00000015535	-	99	67.686	Dasypus_novemcinctus
ENSGALG00000043597	RAD54B	99	67.285	ENSDORG00000002492	Rad54b	99	67.285	Dipodomys_ordii
ENSGALG00000043597	RAD54B	87	67.211	ENSETEG00000010605	-	100	67.211	Echinops_telfairi
ENSGALG00000043597	RAD54B	99	46.788	ENSEBUG00000009104	rad54b	98	46.788	Eptatretus_burgeri
ENSGALG00000043597	RAD54B	88	71.728	ENSEASG00005004021	-	92	71.728	Equus_asinus_asinus
ENSGALG00000043597	RAD54B	99	66.739	ENSECAG00000021949	-	95	71.203	Equus_caballus
ENSGALG00000043597	RAD54B	76	74.214	ENSEEUG00000008056	-	77	74.214	Erinaceus_europaeus
ENSGALG00000043597	RAD54B	99	54.719	ENSELUG00000009287	rad54b	99	54.719	Esox_lucius
ENSGALG00000043597	RAD54B	99	67.650	ENSFCAG00000015513	-	99	73.691	Felis_catus
ENSGALG00000043597	RAD54B	99	85.808	ENSFALG00000005467	-	99	85.808	Ficedula_albicollis
ENSGALG00000043597	RAD54B	99	68.197	ENSFDAG00000020541	-	100	68.197	Fukomys_damarensis
ENSGALG00000043597	RAD54B	86	60.881	ENSFHEG00000014382	rad54b	86	60.881	Fundulus_heteroclitus
ENSGALG00000043597	RAD54B	85	60.606	ENSGMOG00000014774	rad54b	98	60.606	Gadus_morhua
ENSGALG00000043597	RAD54B	100	58.099	ENSGAFG00000007901	rad54b	100	58.099	Gambusia_affinis
ENSGALG00000043597	RAD54B	99	56.852	ENSGACG00000009128	rad54b	100	56.852	Gasterosteus_aculeatus
ENSGALG00000043597	RAD54B	99	78.455	ENSGAGG00000018747	-	99	78.455	Gopherus_agassizii
ENSGALG00000043597	RAD54B	99	68.615	ENSGGOG00000023516	-	99	68.615	Gorilla_gorilla
ENSGALG00000043597	RAD54B	99	56.342	ENSHBUG00000016017	rad54b	99	56.342	Haplochromis_burtoni
ENSGALG00000043597	RAD54B	99	67.644	ENSHGLG00000008263	RAD54B	99	67.644	Heterocephalus_glaber_female
ENSGALG00000043597	RAD54B	99	66.882	ENSHGLG00100008108	-	99	66.882	Heterocephalus_glaber_male
ENSGALG00000043597	RAD54B	99	54.856	ENSHCOG00000004764	rad54b	98	58.057	Hippocampus_comes
ENSGALG00000043597	RAD54B	99	54.869	ENSIPUG00000018531	rad54b	99	54.869	Ictalurus_punctatus
ENSGALG00000043597	RAD54B	99	65.939	ENSSTOG00000010791	-	99	65.939	Ictidomys_tridecemlineatus
ENSGALG00000043597	RAD54B	99	67.171	ENSJJAG00000010314	Rad54b	99	67.171	Jaculus_jaculus
ENSGALG00000043597	RAD54B	85	60.705	ENSKMAG00000004744	rad54b	91	60.705	Kryptolebias_marmoratus
ENSGALG00000043597	RAD54B	87	75.385	ENSLACG00000000859	-	100	71.372	Latimeria_chalumnae
ENSGALG00000043597	RAD54B	99	61.087	ENSLOCG00000010100	rad54b	94	67.001	Lepisosteus_oculatus
ENSGALG00000043597	RAD54B	88	70.421	ENSLAFG00000015315	-	99	70.421	Loxodonta_africana
ENSGALG00000043597	RAD54B	99	68.472	ENSMFAG00000031629	-	100	73.626	Macaca_fascicularis
ENSGALG00000043597	RAD54B	99	68.472	ENSMMUG00000005659	-	100	68.472	Macaca_mulatta
ENSGALG00000043597	RAD54B	99	68.078	ENSMNEG00000016408	-	100	68.078	Macaca_nemestrina
ENSGALG00000043597	RAD54B	99	68.472	ENSMLEG00000006946	-	100	68.472	Mandrillus_leucophaeus
ENSGALG00000043597	RAD54B	99	57.713	ENSMAMG00000012269	rad54b	99	57.775	Mastacembelus_armatus
ENSGALG00000043597	RAD54B	99	56.237	ENSMZEG00005005281	rad54b	97	60.654	Maylandia_zebra
ENSGALG00000043597	RAD54B	100	95.207	ENSMGAG00000012024	-	100	95.207	Meleagris_gallopavo
ENSGALG00000043597	RAD54B	99	66.667	ENSMAUG00000013586	Rad54b	99	66.667	Mesocricetus_auratus
ENSGALG00000043597	RAD54B	90	70.823	ENSMICG00000000754	-	95	70.823	Microcebus_murinus
ENSGALG00000043597	RAD54B	100	64.744	ENSMOCG00000020035	Rad54b	100	64.744	Microtus_ochrogaster
ENSGALG00000043597	RAD54B	88	60.513	ENSMMOG00000003394	rad54b	92	60.513	Mola_mola
ENSGALG00000043597	RAD54B	87	73.434	ENSMODG00000007343	-	99	72.966	Monodelphis_domestica
ENSGALG00000043597	RAD54B	70	61.240	ENSMALG00000001520	rad54b	99	61.240	Monopterus_albus
ENSGALG00000043597	RAD54B	99	65.899	MGP_CAROLIEiJ_G0025810	Rad54b	99	65.899	Mus_caroli
ENSGALG00000043597	RAD54B	99	65.789	ENSMUSG00000078773	Rad54b	99	65.789	Mus_musculus
ENSGALG00000043597	RAD54B	99	66.118	MGP_PahariEiJ_G0023933	Rad54b	99	65.974	Mus_pahari
ENSGALG00000043597	RAD54B	99	66.338	MGP_SPRETEiJ_G0026758	Rad54b	99	66.338	Mus_spretus
ENSGALG00000043597	RAD54B	87	73.459	ENSMPUG00000008878	-	98	73.459	Mustela_putorius_furo
ENSGALG00000043597	RAD54B	99	67.939	ENSMLUG00000008953	-	99	67.939	Myotis_lucifugus
ENSGALG00000043597	RAD54B	99	67.172	ENSNGAG00000017537	Rad54b	99	67.172	Nannospalax_galili
ENSGALG00000043597	RAD54B	99	56.958	ENSNBRG00000013394	rad54b	99	56.958	Neolamprologus_brichardi
ENSGALG00000043597	RAD54B	100	68.295	ENSNLEG00000003062	-	100	73.800	Nomascus_leucogenys
ENSGALG00000043597	RAD54B	70	70.297	ENSMEUG00000012426	-	71	70.297	Notamacropus_eugenii
ENSGALG00000043597	RAD54B	80	74.963	ENSODEG00000002650	-	99	74.963	Octodon_degus
ENSGALG00000043597	RAD54B	99	67.650	ENSODEG00000019564	-	99	67.650	Octodon_degus
ENSGALG00000043597	RAD54B	99	58.405	ENSONIG00000006067	rad54b	99	58.405	Oreochromis_niloticus
ENSGALG00000043597	RAD54B	82	75.968	ENSOANG00000011348	-	99	75.968	Ornithorhynchus_anatinus
ENSGALG00000043597	RAD54B	99	66.776	ENSOCUG00000016478	-	99	66.776	Oryctolagus_cuniculus
ENSGALG00000043597	RAD54B	99	56.397	ENSORLG00000008918	rad54b	99	64.743	Oryzias_latipes
ENSGALG00000043597	RAD54B	69	64.587	ENSORLG00020012171	rad54b	99	64.587	Oryzias_latipes_hni
ENSGALG00000043597	RAD54B	99	56.705	ENSORLG00015018536	rad54b	99	56.705	Oryzias_latipes_hsok
ENSGALG00000043597	RAD54B	83	62.420	ENSOMEG00000004345	rad54b	99	62.420	Oryzias_melastigma
ENSGALG00000043597	RAD54B	99	66.306	ENSOGAG00000007854	-	99	66.306	Otolemur_garnettii
ENSGALG00000043597	RAD54B	87	71.875	ENSOARG00000007691	-	98	71.875	Ovis_aries
ENSGALG00000043597	RAD54B	99	67.283	ENSPPAG00000029572	-	100	67.283	Pan_paniscus
ENSGALG00000043597	RAD54B	99	67.541	ENSPPRG00000007571	-	99	73.554	Panthera_pardus
ENSGALG00000043597	RAD54B	79	73.691	ENSPTIG00000012670	-	99	73.691	Panthera_tigris_altaica
ENSGALG00000043597	RAD54B	99	68.478	ENSPTRG00000020427	-	100	74.038	Pan_troglodytes
ENSGALG00000043597	RAD54B	99	68.581	ENSPANG00000019566	-	100	68.581	Papio_anubis
ENSGALG00000043597	RAD54B	99	59.184	ENSPKIG00000014974	rad54b	99	59.184	Paramormyrops_kingsleyae
ENSGALG00000043597	RAD54B	99	75.299	ENSPSIG00000002383	-	100	79.319	Pelodiscus_sinensis
ENSGALG00000043597	RAD54B	99	66.703	ENSPEMG00000012133	Rad54b	99	66.703	Peromyscus_maniculatus_bairdii
ENSGALG00000043597	RAD54B	86	59.875	ENSPMAG00000002916	rad54b	99	60.000	Petromyzon_marinus
ENSGALG00000043597	RAD54B	87	73.940	ENSPCIG00000020151	-	94	73.234	Phascolarctos_cinereus
ENSGALG00000043597	RAD54B	100	57.113	ENSPFOG00000023411	rad54b	100	57.218	Poecilia_formosa
ENSGALG00000043597	RAD54B	100	56.857	ENSPLAG00000010430	rad54b	100	56.962	Poecilia_latipinna
ENSGALG00000043597	RAD54B	100	56.846	ENSPMEG00000016873	rad54b	97	61.446	Poecilia_mexicana
ENSGALG00000043597	RAD54B	100	57.667	ENSPREG00000018443	rad54b	100	57.667	Poecilia_reticulata
ENSGALG00000043597	RAD54B	99	68.438	ENSPPYG00000018750	-	100	68.438	Pongo_abelii
ENSGALG00000043597	RAD54B	99	67.503	ENSPCOG00000026845	-	99	72.727	Propithecus_coquereli
ENSGALG00000043597	RAD54B	81	72.813	ENSPVAG00000000261	-	86	72.813	Pteropus_vampyrus
ENSGALG00000043597	RAD54B	85	61.929	ENSPNYG00000018303	rad54b	95	61.929	Pundamilia_nyererei
ENSGALG00000043597	RAD54B	99	56.137	ENSPNAG00000000295	rad54b	97	70.000	Pygocentrus_nattereri
ENSGALG00000043597	RAD54B	99	65.939	ENSRNOG00000039949	Rad54b	99	65.939	Rattus_norvegicus
ENSGALG00000043597	RAD54B	99	68.256	ENSRBIG00000020419	-	100	68.256	Rhinopithecus_bieti
ENSGALG00000043597	RAD54B	99	68.147	ENSRROG00000039897	-	100	68.147	Rhinopithecus_roxellana
ENSGALG00000043597	RAD54B	85	35.447	YBR073W	RDH54	88	36.136	Saccharomyces_cerevisiae
ENSGALG00000043597	RAD54B	99	67.606	ENSSBOG00000028501	-	100	67.606	Saimiri_boliviensis_boliviensis
ENSGALG00000043597	RAD54B	99	68.147	ENSSHAG00000017038	-	99	68.147	Sarcophilus_harrisii
ENSGALG00000043597	RAD54B	62	68.421	ENSSFOG00015008483	rad54b	88	68.421	Scleropages_formosus
ENSGALG00000043597	RAD54B	99	56.289	ENSSMAG00000018659	rad54b	99	57.313	Scophthalmus_maximus
ENSGALG00000043597	RAD54B	97	57.204	ENSSDUG00000001122	rad54b	97	57.204	Seriola_dumerili
ENSGALG00000043597	RAD54B	90	75.000	ENSSLDG00000013787	rad54b	96	75.000	Seriola_lalandi_dorsalis
ENSGALG00000043597	RAD54B	100	75.435	ENSSPUG00000016497	-	100	75.435	Sphenodon_punctatus
ENSGALG00000043597	RAD54B	99	57.375	ENSSPAG00000012800	rad54b	99	57.375	Stegastes_partitus
ENSGALG00000043597	RAD54B	99	68.078	ENSSSCG00000006101	-	99	73.467	Sus_scrofa
ENSGALG00000043597	RAD54B	99	85.730	ENSTGUG00000011880	-	100	85.730	Taeniopygia_guttata
ENSGALG00000043597	RAD54B	99	55.333	ENSTRUG00000010015	rad54b	99	56.250	Takifugu_rubripes
ENSGALG00000043597	RAD54B	99	63.607	ENSTTRG00000006312	-	99	63.607	Tursiops_truncatus
ENSGALG00000043597	RAD54B	99	67.612	ENSUMAG00000016401	-	99	67.612	Ursus_maritimus
ENSGALG00000043597	RAD54B	99	66.995	ENSVPAG00000003157	-	99	66.995	Vicugna_pacos
ENSGALG00000043597	RAD54B	99	55.471	ENSXETG00000025924	rad54b	99	58.758	Xenopus_tropicalis
ENSGALG00000043597	RAD54B	100	57.713	ENSXMAG00000013141	rad54b	100	57.713	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006281	DNA repair	-	IEA	Process