EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGALG00000046009 (Gene tree)
Gene ID: 101748113
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type protein 1-like
Gene Type: protein_coding
Species: Gallus_gallus
Status: putative
Strand: Minus strand
Length: 11604 bases
Position: chr4:85942578-85954181
Accession: 101748113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGALP00000068947	zf-met	PF12874.7	1.8e-22	1	3
ENSGALP00000068947	zf-met	PF12874.7	1.8e-22	2	3
ENSGALP00000068947	zf-met	PF12874.7	1.8e-22	3	3
ENSGALP00000070602	zf-met	PF12874.7	1.8e-22	1	3
ENSGALP00000070602	zf-met	PF12874.7	1.8e-22	2	3
ENSGALP00000070602	zf-met	PF12874.7	1.8e-22	3	3
ENSGALP00000061284	zf-met	PF12874.7	2.6e-22	1	3
ENSGALP00000061284	zf-met	PF12874.7	2.6e-22	2	3
ENSGALP00000061284	zf-met	PF12874.7	2.6e-22	3	3
ENSGALP00000069926	zf-met	PF12874.7	2.6e-22	1	3
ENSGALP00000069926	zf-met	PF12874.7	2.6e-22	2	3
ENSGALP00000069926	zf-met	PF12874.7	2.6e-22	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGALT00000098284	-	3352	XM_015285936	ENSGALP00000069926	453 (aa)	XP_015141422	UPI000739C658
ENSGALT00000105619	-	3183	-	ENSGALP00000070602	432 (aa)	-	UPI000739D47C
ENSGALT00000084375	-	3307	-	ENSGALP00000061284	453 (aa)	-	A0A1L1RR46
ENSGALT00000101186	-	3236	XM_015285937	ENSGALP00000068947	432 (aa)	XP_015141423	UPI000739D47C

Gene Model

Click here to download ENSGALG00000046009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGALG00000046009's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGALG00000046009	-	66	33.711	ENSAMEG00000004976	ZMAT1	99	30.784	Ailuropoda_melanoleuca
ENSGALG00000046009	-	99	40.200	ENSCPBG00000001356	ZMAT1	89	40.400	Chrysemys_picta_bellii
ENSGALG00000046009	-	99	40.600	ENSGAGG00000002326	ZMAT1	98	40.800	Gopherus_agassizii
ENSGALG00000046009	-	50	73.047	ENSMGAG00000013165	-	89	73.047	Meleagris_gallopavo
ENSGALG00000046009	-	99	32.101	ENSSHAG00000011087	-	87	44.635	Sarcophilus_harrisii
ENSGALG00000046009	-	99	37.037	ENSSPUG00000004951	ZMAT1	86	37.016	Sphenodon_punctatus
ENSGALG00000046009	-	51	38.806	ENSXETG00000001949	krcc1	52	38.806	Xenopus_tropicalis