EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000000429 (Gene tree)
Gene ID: -
Gene Symbol: arf1
Alias: wu:fb33e02|wu:fb78h01
Full Name: ADP-ribosylation factor 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 1631 bases
Position: chrGeneScaffold_2750:166199-167829
Accession: ZDB-GENE-010724-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000000418	MMR_HSR1	PF01926.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000000443	-	549	-	ENSGMOP00000000418	183 (aa)	-	UPI00023EF5A5

Gene Model

Click here to download ENSGMOG00000000429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000000429's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000000429	arf1	89	43.373	ENSGMOG00000002486	-	89	43.373
ENSGMOG00000000429	arf1	95	89.080	ENSGMOG00000004803	-	96	89.080
ENSGMOG00000000429	arf1	70	32.847	ENSGMOG00000004201	ARL10	98	32.847
ENSGMOG00000000429	arf1	94	46.067	ENSGMOG00000020467	arl4cb	91	46.067
ENSGMOG00000000429	arf1	91	44.767	ENSGMOG00000001544	arl3	95	44.767
ENSGMOG00000000429	arf1	94	60.116	ENSGMOG00000006859	arl1	96	60.116
ENSGMOG00000000429	arf1	93	30.409	ENSGMOG00000013490	arl8a	90	30.409
ENSGMOG00000000429	arf1	86	43.373	ENSGMOG00000002137	ARL4D	82	43.373
ENSGMOG00000000429	arf1	95	87.931	ENSGMOG00000007850	arf2b	96	87.931
ENSGMOG00000000429	arf1	92	30.270	ENSGMOG00000012588	sar1ab	92	30.270
ENSGMOG00000000429	arf1	87	45.912	ENSGMOG00000011008	arl2	86	45.912
ENSGMOG00000000429	arf1	94	34.409	ENSGMOG00000015683	arfrp1	91	34.409
ENSGMOG00000000429	arf1	94	48.256	ENSGMOG00000012994	arl5a	90	48.256
ENSGMOG00000000429	arf1	95	81.034	ENSGMOG00000008747	arf5	97	81.034
ENSGMOG00000000429	arf1	95	31.429	ENSGMOG00000002416	arl8bb	94	31.429
ENSGMOG00000000429	arf1	95	81.034	ENSGMOG00000019109	-	96	81.034
ENSGMOG00000000429	arf1	91	44.706	ENSGMOG00000007007	ARL6	89	44.706
ENSGMOG00000000429	arf1	86	44.785	ENSGMOG00000020214	arl14	98	44.785
ENSGMOG00000000429	arf1	90	44.444	ENSGMOG00000006309	arl3l2	99	44.444
ENSGMOG00000000429	arf1	93	44.751	ENSGMOG00000020530	arl4aa	89	44.751

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000000429	arf1	95	90.805	ENSACIG00000012192	-	96	90.805	Amphilophus_citrinellus
ENSGMOG00000000429	arf1	83	86.755	ENSAOCG00000001275	-	88	86.755	Amphiprion_ocellaris
ENSGMOG00000000429	arf1	95	87.861	ENSAPEG00000016909	-	96	87.861	Amphiprion_percula
ENSGMOG00000000429	arf1	95	88.439	ENSATEG00000003174	-	96	88.439	Anabas_testudineus
ENSGMOG00000000429	arf1	95	91.379	ENSACLG00000004123	-	96	91.379	Astatotilapia_calliptera
ENSGMOG00000000429	arf1	95	90.173	ENSAMXG00000019845	arf1	96	90.173	Astyanax_mexicanus
ENSGMOG00000000429	arf1	95	88.439	ENSCVAG00000013374	-	96	88.439	Cyprinodon_variegatus
ENSGMOG00000000429	arf1	95	90.173	ENSDARG00000009484	arf1	96	90.173	Danio_rerio
ENSGMOG00000000429	arf1	95	90.751	ENSELUG00000022533	arf1	76	90.751	Esox_lucius
ENSGMOG00000000429	arf1	95	88.439	ENSFHEG00000005859	-	96	88.439	Fundulus_heteroclitus
ENSGMOG00000000429	arf1	95	88.439	ENSGAFG00000018151	-	96	88.439	Gambusia_affinis
ENSGMOG00000000429	arf1	95	82.081	ENSGACG00000014195	-	94	82.081	Gasterosteus_aculeatus
ENSGMOG00000000429	arf1	95	91.379	ENSHBUG00000002636	-	96	91.379	Haplochromis_burtoni
ENSGMOG00000000429	arf1	95	90.751	ENSIPUG00000006311	arf1	96	90.751	Ictalurus_punctatus
ENSGMOG00000000429	arf1	95	89.595	ENSKMAG00000018315	-	96	89.595	Kryptolebias_marmoratus
ENSGMOG00000000429	arf1	95	85.632	ENSLBEG00000023263	-	96	85.632	Labrus_bergylta
ENSGMOG00000000429	arf1	95	89.017	ENSLBEG00000001998	arf1	97	89.017	Labrus_bergylta
ENSGMOG00000000429	arf1	95	88.439	ENSMAMG00000001553	-	96	88.439	Mastacembelus_armatus
ENSGMOG00000000429	arf1	95	91.379	ENSMZEG00005022594	-	96	91.379	Maylandia_zebra
ENSGMOG00000000429	arf1	95	89.017	ENSMALG00000004269	-	96	89.017	Monopterus_albus
ENSGMOG00000000429	arf1	95	91.379	ENSNBRG00000016455	-	96	91.379	Neolamprologus_brichardi
ENSGMOG00000000429	arf1	95	91.379	ENSONIG00000001286	-	96	91.379	Oreochromis_niloticus
ENSGMOG00000000429	arf1	95	88.439	ENSORLG00000023270	-	96	88.439	Oryzias_latipes
ENSGMOG00000000429	arf1	95	89.017	ENSORLG00020006712	-	96	89.017	Oryzias_latipes_hni
ENSGMOG00000000429	arf1	95	88.439	ENSORLG00015019836	-	96	88.439	Oryzias_latipes_hsok
ENSGMOG00000000429	arf1	95	88.439	ENSOMEG00000023784	-	96	88.439	Oryzias_melastigma
ENSGMOG00000000429	arf1	95	90.173	ENSPMGG00000014174	arf1	96	90.173	Periophthalmus_magnuspinnatus
ENSGMOG00000000429	arf1	95	89.595	ENSPMAG00000002035	arf1	96	89.595	Petromyzon_marinus
ENSGMOG00000000429	arf1	95	88.439	ENSPFOG00000014787	-	96	88.439	Poecilia_formosa
ENSGMOG00000000429	arf1	95	88.439	ENSPLAG00000001041	-	96	88.439	Poecilia_latipinna
ENSGMOG00000000429	arf1	95	88.439	ENSPMEG00000024077	-	96	88.439	Poecilia_mexicana
ENSGMOG00000000429	arf1	95	88.439	ENSPREG00000009009	-	96	88.439	Poecilia_reticulata
ENSGMOG00000000429	arf1	95	91.379	ENSPNYG00000009472	-	96	91.379	Pundamilia_nyererei
ENSGMOG00000000429	arf1	91	91.617	ENSPNAG00000000098	arf1	92	91.617	Pygocentrus_nattereri
ENSGMOG00000000429	arf1	95	76.437	YDL192W	-	96	76.437	Saccharomyces_cerevisiae
ENSGMOG00000000429	arf1	95	75.287	YDL137W	-	96	75.287	Saccharomyces_cerevisiae
ENSGMOG00000000429	arf1	95	84.393	ENSSMAG00000006125	-	96	84.393	Scophthalmus_maximus
ENSGMOG00000000429	arf1	95	87.283	ENSSDUG00000017356	-	96	87.283	Seriola_dumerili
ENSGMOG00000000429	arf1	95	87.283	ENSSLDG00000008504	-	96	87.283	Seriola_lalandi_dorsalis
ENSGMOG00000000429	arf1	95	88.439	ENSSPAG00000011431	-	96	88.439	Stegastes_partitus
ENSGMOG00000000429	arf1	95	89.017	ENSTRUG00000019870	-	96	89.017	Takifugu_rubripes
ENSGMOG00000000429	arf1	95	87.283	ENSTNIG00000011685	-	96	87.283	Tetraodon_nigroviridis
ENSGMOG00000000429	arf1	96	88.000	ENSXCOG00000016687	-	96	88.000	Xiphophorus_couchianus
ENSGMOG00000000429	arf1	95	88.439	ENSXMAG00000009193	-	95	90.303	Xiphophorus_maculatus