EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000000595 (Gene tree)
Gene ID: -
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5b
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 4708 bases
Position: chrGeneScaffold_1425:38460-43167
Accession: ZDB-GENE-040718-354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000000588	RRM_1	PF00076.22	2.8e-28	1	2
ENSGMOP00000000588	RRM_1	PF00076.22	2.8e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000000617	-	687	-	ENSGMOP00000000588	229 (aa)	-	UPI00023EF6A9

Gene Model

Click here to download ENSGMOG00000000595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000000595's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000000595	srsf5b	96	49.772	ENSGMOG00000012906	srsf4	55	51.142
ENSGMOG00000000595	srsf5b	95	53.670	ENSGMOG00000014458	srsf6a	50	52.752
ENSGMOG00000000595	srsf5b	94	38.636	ENSGMOG00000010606	-	90	35.808
ENSGMOG00000000595	srsf5b	95	34.234	ENSGMOG00000007980	srsf9	75	37.917
ENSGMOG00000000595	srsf5b	95	50.230	ENSGMOG00000006105	srsf6a	63	48.649
ENSGMOG00000000595	srsf5b	90	39.524	ENSGMOG00000014787	-	66	37.089
ENSGMOG00000000595	srsf5b	97	57.207	ENSGMOG00000000869	srsf5a	96	55.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000000595	srsf5b	97	67.117	ENSG00000100650	SRSF5	99	71.533	Homo_sapiens
ENSGMOG00000000595	srsf5b	99	80.973	ENSAPOG00000008642	srsf5b	65	80.973	Acanthochromis_polyacanthus
ENSGMOG00000000595	srsf5b	97	67.117	ENSAMEG00000014574	SRSF5	67	67.257	Ailuropoda_melanoleuca
ENSGMOG00000000595	srsf5b	99	80.531	ENSACIG00000010742	srsf5b	82	91.241	Amphilophus_citrinellus
ENSGMOG00000000595	srsf5b	99	80.973	ENSAOCG00000005719	srsf5b	65	80.973	Amphiprion_ocellaris
ENSGMOG00000000595	srsf5b	99	80.973	ENSAPEG00000007830	srsf5b	65	80.973	Amphiprion_percula
ENSGMOG00000000595	srsf5b	99	77.876	ENSATEG00000019112	srsf5b	64	77.876	Anabas_testudineus
ENSGMOG00000000595	srsf5b	94	68.981	ENSAPLG00000014681	SRSF5	69	66.079	Anas_platyrhynchos
ENSGMOG00000000595	srsf5b	97	67.117	ENSACAG00000005143	SRSF5	69	67.257	Anolis_carolinensis
ENSGMOG00000000595	srsf5b	97	67.117	ENSANAG00000027977	-	76	92.000	Aotus_nancymaae
ENSGMOG00000000595	srsf5b	61	67.626	ENSANAG00000037529	-	97	69.065	Aotus_nancymaae
ENSGMOG00000000595	srsf5b	99	80.088	ENSACLG00000026424	srsf5b	64	80.088	Astatotilapia_calliptera
ENSGMOG00000000595	srsf5b	99	79.646	ENSAMXG00000011932	srsf5b	84	90.441	Astyanax_mexicanus
ENSGMOG00000000595	srsf5b	97	67.117	ENSBTAG00000011596	SRSF5	67	67.257	Bos_taurus
ENSGMOG00000000595	srsf5b	97	67.117	ENSCJAG00000014884	SRSF5	76	92.000	Callithrix_jacchus
ENSGMOG00000000595	srsf5b	97	67.117	ENSCAFG00000016589	SRSF5	67	67.257	Canis_familiaris
ENSGMOG00000000595	srsf5b	97	67.117	ENSCAFG00020005661	SRSF5	67	67.257	Canis_lupus_dingo
ENSGMOG00000000595	srsf5b	97	67.117	ENSCHIG00000016794	SRSF5	66	67.257	Capra_hircus
ENSGMOG00000000595	srsf5b	97	67.117	ENSTSYG00000007786	SRSF5	76	92.000	Carlito_syrichta
ENSGMOG00000000595	srsf5b	97	67.117	ENSCAPG00000008801	SRSF5	66	67.257	Cavia_aperea
ENSGMOG00000000595	srsf5b	97	67.117	ENSCPOG00000039926	SRSF5	66	67.257	Cavia_porcellus
ENSGMOG00000000595	srsf5b	97	67.117	ENSCCAG00000029002	SRSF5	76	92.000	Cebus_capucinus
ENSGMOG00000000595	srsf5b	97	67.117	ENSCATG00000045051	SRSF5	76	92.000	Cercocebus_atys
ENSGMOG00000000595	srsf5b	97	67.117	ENSCLAG00000004755	SRSF5	67	67.257	Chinchilla_lanigera
ENSGMOG00000000595	srsf5b	97	67.117	ENSCSAG00000013041	SRSF5	67	67.257	Chlorocebus_sabaeus
ENSGMOG00000000595	srsf5b	97	67.568	ENSCPBG00000021653	SRSF5	68	67.699	Chrysemys_picta_bellii
ENSGMOG00000000595	srsf5b	97	67.117	ENSCANG00000030560	SRSF5	76	92.000	Colobus_angolensis_palliatus
ENSGMOG00000000595	srsf5b	97	67.117	ENSCGRG00001015339	Srsf5	68	67.257	Cricetulus_griseus_chok1gshd
ENSGMOG00000000595	srsf5b	97	67.117	ENSCGRG00000009833	Srsf5	68	67.257	Cricetulus_griseus_crigri
ENSGMOG00000000595	srsf5b	100	78.166	ENSCSEG00000003801	srsf5b	66	78.761	Cynoglossus_semilaevis
ENSGMOG00000000595	srsf5b	99	79.646	ENSCVAG00000017240	srsf5b	58	79.646	Cyprinodon_variegatus
ENSGMOG00000000595	srsf5b	97	77.130	ENSDARG00000027734	srsf5b	91	85.401	Danio_rerio
ENSGMOG00000000595	srsf5b	97	67.117	ENSDNOG00000006160	SRSF5	68	67.257	Dasypus_novemcinctus
ENSGMOG00000000595	srsf5b	97	67.117	ENSDORG00000003989	Srsf5	68	67.257	Dipodomys_ordii
ENSGMOG00000000595	srsf5b	97	64.865	ENSETEG00000020396	SRSF5	68	66.372	Echinops_telfairi
ENSGMOG00000000595	srsf5b	99	53.947	ENSEBUG00000006229	srsf5b	76	48.594	Eptatretus_burgeri
ENSGMOG00000000595	srsf5b	97	67.117	ENSEASG00005016615	SRSF5	67	67.257	Equus_asinus_asinus
ENSGMOG00000000595	srsf5b	97	67.117	ENSECAG00000026873	SRSF5	88	72.059	Equus_caballus
ENSGMOG00000000595	srsf5b	99	83.186	ENSELUG00000019852	srsf5b	85	84.932	Esox_lucius
ENSGMOG00000000595	srsf5b	97	67.117	ENSFCAG00000008848	SRSF5	75	92.000	Felis_catus
ENSGMOG00000000595	srsf5b	97	67.568	ENSFALG00000004979	SRSF5	68	67.699	Ficedula_albicollis
ENSGMOG00000000595	srsf5b	97	67.117	ENSFDAG00000011562	SRSF5	68	67.257	Fukomys_damarensis
ENSGMOG00000000595	srsf5b	99	79.646	ENSFHEG00000009476	srsf5b	61	79.646	Fundulus_heteroclitus
ENSGMOG00000000595	srsf5b	97	67.117	ENSGALG00000009421	SRSF5	88	71.324	Gallus_gallus
ENSGMOG00000000595	srsf5b	99	76.549	ENSGAFG00000002865	srsf5b	62	77.434	Gambusia_affinis
ENSGMOG00000000595	srsf5b	99	74.699	ENSGACG00000007834	srsf5b	86	90.441	Gasterosteus_aculeatus
ENSGMOG00000000595	srsf5b	97	67.568	ENSGAGG00000004447	SRSF5	68	67.699	Gopherus_agassizii
ENSGMOG00000000595	srsf5b	97	67.117	ENSGGOG00000016462	SRSF5	76	92.000	Gorilla_gorilla
ENSGMOG00000000595	srsf5b	99	80.088	ENSHBUG00000012462	srsf5b	95	86.331	Haplochromis_burtoni
ENSGMOG00000000595	srsf5b	97	66.667	ENSHGLG00000010147	SRSF5	67	66.814	Heterocephalus_glaber_female
ENSGMOG00000000595	srsf5b	97	66.667	ENSHGLG00100015328	SRSF5	67	66.814	Heterocephalus_glaber_male
ENSGMOG00000000595	srsf5b	94	47.926	ENSHGLG00100000095	-	57	80.392	Heterocephalus_glaber_male
ENSGMOG00000000595	srsf5b	99	76.549	ENSHCOG00000005592	srsf5b	66	74.779	Hippocampus_comes
ENSGMOG00000000595	srsf5b	97	67.117	ENSSTOG00000020672	SRSF5	67	67.257	Ictidomys_tridecemlineatus
ENSGMOG00000000595	srsf5b	97	67.117	ENSJJAG00000001688	Srsf5	67	67.257	Jaculus_jaculus
ENSGMOG00000000595	srsf5b	99	76.991	ENSKMAG00000020486	srsf5b	84	85.294	Kryptolebias_marmoratus
ENSGMOG00000000595	srsf5b	99	76.991	ENSLBEG00000013647	srsf5b	64	77.876	Labrus_bergylta
ENSGMOG00000000595	srsf5b	97	68.468	ENSLACG00000005874	SRSF5	68	69.027	Latimeria_chalumnae
ENSGMOG00000000595	srsf5b	97	70.925	ENSLOCG00000012438	srsf5b	70	72.294	Lepisosteus_oculatus
ENSGMOG00000000595	srsf5b	97	66.667	ENSLAFG00000005260	SRSF5	67	66.814	Loxodonta_africana
ENSGMOG00000000595	srsf5b	97	67.117	ENSMFAG00000002393	SRSF5	76	92.000	Macaca_fascicularis
ENSGMOG00000000595	srsf5b	97	67.117	ENSMNEG00000030872	SRSF5	76	92.000	Macaca_nemestrina
ENSGMOG00000000595	srsf5b	97	67.117	ENSMLEG00000030017	SRSF5	76	92.000	Mandrillus_leucophaeus
ENSGMOG00000000595	srsf5b	99	80.531	ENSMAMG00000002673	srsf5b	64	80.531	Mastacembelus_armatus
ENSGMOG00000000595	srsf5b	99	80.088	ENSMZEG00005003550	srsf5b	64	80.088	Maylandia_zebra
ENSGMOG00000000595	srsf5b	80	60.109	ENSMGAG00000011835	SRSF5	63	60.428	Meleagris_gallopavo
ENSGMOG00000000595	srsf5b	97	67.117	ENSMAUG00000009544	Srsf5	67	67.257	Mesocricetus_auratus
ENSGMOG00000000595	srsf5b	97	67.117	ENSMICG00000037432	-	76	92.000	Microcebus_murinus
ENSGMOG00000000595	srsf5b	97	67.117	ENSMOCG00000013134	Srsf5	67	67.257	Microtus_ochrogaster
ENSGMOG00000000595	srsf5b	97	75.336	ENSMMOG00000000137	srsf5b	99	71.724	Mola_mola
ENSGMOG00000000595	srsf5b	97	67.568	ENSMODG00000011362	SRSF5	68	67.699	Monodelphis_domestica
ENSGMOG00000000595	srsf5b	99	80.531	ENSMALG00000021875	srsf5b	84	91.176	Monopterus_albus
ENSGMOG00000000595	srsf5b	97	67.117	ENSMUSG00000021134	Srsf5	96	93.182	Mus_musculus
ENSGMOG00000000595	srsf5b	97	67.117	MGP_PahariEiJ_G0029659	Srsf5	68	67.257	Mus_pahari
ENSGMOG00000000595	srsf5b	97	67.117	ENSMPUG00000007458	SRSF5	67	67.257	Mustela_putorius_furo
ENSGMOG00000000595	srsf5b	97	67.117	ENSMLUG00000011939	SRSF5	65	67.257	Myotis_lucifugus
ENSGMOG00000000595	srsf5b	97	67.117	ENSNGAG00000010073	-	67	67.257	Nannospalax_galili
ENSGMOG00000000595	srsf5b	99	80.973	ENSNBRG00000001285	srsf5b	65	80.973	Neolamprologus_brichardi
ENSGMOG00000000595	srsf5b	97	67.117	ENSNLEG00000001615	SRSF5	76	92.000	Nomascus_leucogenys
ENSGMOG00000000595	srsf5b	97	67.117	ENSOPRG00000008286	SRSF5	65	67.257	Ochotona_princeps
ENSGMOG00000000595	srsf5b	97	66.216	ENSODEG00000000700	-	69	65.487	Octodon_degus
ENSGMOG00000000595	srsf5b	97	67.117	ENSODEG00000013469	-	68	67.257	Octodon_degus
ENSGMOG00000000595	srsf5b	99	80.088	ENSONIG00000005759	srsf5b	64	80.088	Oreochromis_niloticus
ENSGMOG00000000595	srsf5b	97	63.514	ENSOANG00000013336	SRSF5	63	66.509	Ornithorhynchus_anatinus
ENSGMOG00000000595	srsf5b	97	67.117	ENSOCUG00000009274	SRSF5	66	67.257	Oryctolagus_cuniculus
ENSGMOG00000000595	srsf5b	99	75.664	ENSORLG00000029854	srsf5b	59	76.106	Oryzias_latipes
ENSGMOG00000000595	srsf5b	99	76.991	ENSORLG00015001720	srsf5b	65	76.549	Oryzias_latipes_hsok
ENSGMOG00000000595	srsf5b	97	67.117	ENSOGAG00000015122	SRSF5	67	67.257	Otolemur_garnettii
ENSGMOG00000000595	srsf5b	97	67.117	ENSPPAG00000029921	SRSF5	76	92.000	Pan_paniscus
ENSGMOG00000000595	srsf5b	97	67.117	ENSPPRG00000012903	SRSF5	75	92.000	Panthera_pardus
ENSGMOG00000000595	srsf5b	97	67.117	ENSPTIG00000018589	SRSF5	75	92.000	Panthera_tigris_altaica
ENSGMOG00000000595	srsf5b	97	67.117	ENSPTRG00000006488	SRSF5	76	92.000	Pan_troglodytes
ENSGMOG00000000595	srsf5b	97	67.117	ENSPANG00000021091	SRSF5	76	92.000	Papio_anubis
ENSGMOG00000000595	srsf5b	97	67.568	ENSPSIG00000012522	SRSF5	69	67.699	Pelodiscus_sinensis
ENSGMOG00000000595	srsf5b	60	86.131	ENSPMGG00000021646	srsf5b	91	86.131	Periophthalmus_magnuspinnatus
ENSGMOG00000000595	srsf5b	97	67.117	ENSPEMG00000020173	Srsf5	68	67.257	Peromyscus_maniculatus_bairdii
ENSGMOG00000000595	srsf5b	99	52.564	ENSPMAG00000007790	srsf5b	68	52.174	Petromyzon_marinus
ENSGMOG00000000595	srsf5b	97	67.568	ENSPCIG00000011877	SRSF5	68	67.699	Phascolarctos_cinereus
ENSGMOG00000000595	srsf5b	99	80.088	ENSPFOG00000017700	srsf5b	62	80.088	Poecilia_formosa
ENSGMOG00000000595	srsf5b	99	80.531	ENSPLAG00000006480	srsf5b	63	80.531	Poecilia_latipinna
ENSGMOG00000000595	srsf5b	99	80.088	ENSPMEG00000012751	srsf5b	84	91.176	Poecilia_mexicana
ENSGMOG00000000595	srsf5b	99	76.549	ENSPREG00000010381	srsf5b	62	77.434	Poecilia_reticulata
ENSGMOG00000000595	srsf5b	97	67.117	ENSPPYG00000005945	SRSF5	67	67.257	Pongo_abelii
ENSGMOG00000000595	srsf5b	83	62.632	ENSPCAG00000004405	SRSF5	100	63.684	Procavia_capensis
ENSGMOG00000000595	srsf5b	97	67.117	ENSPCOG00000014442	SRSF5	88	72.059	Propithecus_coquereli
ENSGMOG00000000595	srsf5b	99	80.088	ENSPNYG00000002669	srsf5b	95	90.511	Pundamilia_nyererei
ENSGMOG00000000595	srsf5b	99	79.204	ENSPNAG00000011262	srsf5b	84	89.706	Pygocentrus_nattereri
ENSGMOG00000000595	srsf5b	97	67.117	ENSRNOG00000005513	Srsf5	68	67.257	Rattus_norvegicus
ENSGMOG00000000595	srsf5b	97	67.117	ENSRBIG00000013003	SRSF5	76	92.000	Rhinopithecus_bieti
ENSGMOG00000000595	srsf5b	97	67.117	ENSRROG00000043407	SRSF5	76	92.000	Rhinopithecus_roxellana
ENSGMOG00000000595	srsf5b	97	67.117	ENSSBOG00000030784	SRSF5	76	92.000	Saimiri_boliviensis_boliviensis
ENSGMOG00000000595	srsf5b	97	67.568	ENSSHAG00000002871	SRSF5	68	67.699	Sarcophilus_harrisii
ENSGMOG00000000595	srsf5b	99	79.221	ENSSMAG00000019728	srsf5b	62	79.221	Scophthalmus_maximus
ENSGMOG00000000595	srsf5b	99	80.531	ENSSDUG00000005766	srsf5b	66	80.531	Seriola_dumerili
ENSGMOG00000000595	srsf5b	99	80.531	ENSSLDG00000023255	srsf5b	84	90.441	Seriola_lalandi_dorsalis
ENSGMOG00000000595	srsf5b	55	94.643	ENSSARG00000001059	SRSF5	50	90.000	Sorex_araneus
ENSGMOG00000000595	srsf5b	97	70.270	ENSSPUG00000002464	SRSF5	89	69.655	Sphenodon_punctatus
ENSGMOG00000000595	srsf5b	99	80.531	ENSSPAG00000015325	srsf5b	65	80.531	Stegastes_partitus
ENSGMOG00000000595	srsf5b	97	67.117	ENSSSCG00000032583	SRSF5	67	67.257	Sus_scrofa
ENSGMOG00000000595	srsf5b	97	67.568	ENSTGUG00000011425	SRSF5	68	67.699	Taeniopygia_guttata
ENSGMOG00000000595	srsf5b	99	73.894	ENSTRUG00000017811	srsf5b	60	75.664	Takifugu_rubripes
ENSGMOG00000000595	srsf5b	99	73.894	ENSTNIG00000016411	srsf5b	67	75.664	Tetraodon_nigroviridis
ENSGMOG00000000595	srsf5b	97	65.315	ENSTBEG00000001972	SRSF5	66	65.487	Tupaia_belangeri
ENSGMOG00000000595	srsf5b	97	66.968	ENSTTRG00000003318	SRSF5	66	67.111	Tursiops_truncatus
ENSGMOG00000000595	srsf5b	97	67.117	ENSUAMG00000014184	SRSF5	67	67.257	Ursus_americanus
ENSGMOG00000000595	srsf5b	97	67.117	ENSUMAG00000009827	SRSF5	67	67.257	Ursus_maritimus
ENSGMOG00000000595	srsf5b	97	67.117	ENSVPAG00000006448	SRSF5	67	67.257	Vicugna_pacos
ENSGMOG00000000595	srsf5b	97	67.117	ENSVVUG00000003790	SRSF5	67	67.257	Vulpes_vulpes
ENSGMOG00000000595	srsf5b	98	69.778	ENSXETG00000002211	srsf5	68	65.812	Xenopus_tropicalis
ENSGMOG00000000595	srsf5b	99	80.531	ENSXCOG00000001570	srsf5b	65	80.531	Xiphophorus_couchianus
ENSGMOG00000000595	srsf5b	99	80.531	ENSXMAG00000026416	srsf5b	84	91.912	Xiphophorus_maculatus