EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGMOG00000000629 (Gene tree)
Gene ID
-
Gene Symbol
scrt1b
Alias
zgc:113646
Full Name
scratch family zinc finger 1b
Gene Type
protein_coding
Species
Gadus_morhua
Status
putative
Strand
Minus strand
Length
2232 bases
Position
chrGeneScaffold_1724:148-2379
Accession
ZDB-GENE-050327-72
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGMOP00000000613zf-C2H2PF00096.265.2e-2514
ENSGMOP00000000613zf-C2H2PF00096.265.2e-2524
ENSGMOP00000000613zf-C2H2PF00096.265.2e-2534
ENSGMOP00000000613zf-C2H2PF00096.265.2e-2544
ENSGMOP00000000613zf-metPF12874.75.5e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGMOT00000000642-828-ENSGMOP00000000613275 (aa)-UPI00023EF66A
Gene Model
Click here to download ENSGMOG00000000629's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000000629's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGMOG00000000629scrt1b5939.241ENSGMOG00000002344zbtb415339.241
ENSGMOG00000000629scrt1b5538.158ENSGMOG00000003238-9932.110
ENSGMOG00000000629scrt1b5140.196ENSGMOG00000004242znf319b5940.196
ENSGMOG00000000629scrt1b5342.254ENSGMOG00000012990-10042.254
ENSGMOG00000000629scrt1b5138.356ENSGMOG00000016613-8037.179
ENSGMOG00000000629scrt1b5338.462ENSGMOG00000017526-9333.071
ENSGMOG00000000629scrt1b5638.596ENSGMOG00000007875ZNF3198538.596
ENSGMOG00000000629scrt1b6534.615ENSGMOG00000017555znf710b8234.615
ENSGMOG00000000629scrt1b5135.294ENSGMOG00000016007-7335.294
ENSGMOG00000000629scrt1b6138.961ENSGMOG00000018506-9938.961
ENSGMOG00000000629scrt1b5250.000ENSGMOG00000000127-9738.346
ENSGMOG00000000629scrt1b5343.243ENSGMOG00000017295GFI16140.708
ENSGMOG00000000629scrt1b5339.823ENSGMOG00000019123gfi1b8039.823
ENSGMOG00000000629scrt1b5547.945ENSGMOG00000000494-9547.945
ENSGMOG00000000629scrt1b9539.085ENSGMOG00000002669snai29839.085
ENSGMOG00000000629scrt1b5238.095ENSGMOG00000020024-9938.095
ENSGMOG00000000629scrt1b7042.963ENSGMOG00000004063ZNF6289942.963
ENSGMOG00000000629scrt1b5238.596ENSGMOG00000003709nktr5038.596
ENSGMOG00000000629scrt1b5035.294ENSGMOG00000007809-8935.294
ENSGMOG00000000629scrt1b5838.000ENSGMOG00000020149si:dkeyp-113d7.110038.095
ENSGMOG00000000629scrt1b7533.824ENSGMOG00000012038prdm59430.714
ENSGMOG00000000629scrt1b6337.273ENSGMOG00000016554znf6469037.273
ENSGMOG00000000629scrt1b6036.471ENSGMOG00000007538znf3667536.471
ENSGMOG00000000629scrt1b7333.898ENSGMOG00000019214bcl6aa5033.898
ENSGMOG00000000629scrt1b6440.678ENSGMOG00000009187ZNF6267340.678
ENSGMOG00000000629scrt1b6543.182ENSGMOG00000006668znf2365443.182
ENSGMOG00000000629scrt1b9659.416ENSGMOG00000019519scrt29559.416
ENSGMOG00000000629scrt1b5940.000ENSGMOG00000004315-9740.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGMOG00000000629scrt1b9976.655ENSAPOG00000015197-9976.655Acanthochromis_polyacanthus
ENSGMOG00000000629scrt1b9668.000ENSAPOG00000003680scrt29668.000Acanthochromis_polyacanthus
ENSGMOG00000000629scrt1b10093.907ENSAPOG00000009279scrt1b9993.907Acanthochromis_polyacanthus
ENSGMOG00000000629scrt1b9657.333ENSACIG00000001296-9657.333Amphilophus_citrinellus
ENSGMOG00000000629scrt1b10088.889ENSACIG00000013613scrt1b9988.889Amphilophus_citrinellus
ENSGMOG00000000629scrt1b9666.545ENSACIG00000012604scrt29666.545Amphilophus_citrinellus
ENSGMOG00000000629scrt1b9974.497ENSACIG00000006586-9974.497Amphilophus_citrinellus
ENSGMOG00000000629scrt1b9975.585ENSAOCG00000023304-9975.585Amphiprion_ocellaris
ENSGMOG00000000629scrt1b10093.190ENSAOCG00000003910scrt1b9993.190Amphiprion_ocellaris
ENSGMOG00000000629scrt1b9668.000ENSAOCG00000021557scrt29668.000Amphiprion_ocellaris
ENSGMOG00000000629scrt1b9668.000ENSAPEG00000022558scrt29668.000Amphiprion_percula
ENSGMOG00000000629scrt1b10093.548ENSAPEG00000000869scrt1b9993.548Amphiprion_percula
ENSGMOG00000000629scrt1b9975.585ENSAPEG00000005677-9975.585Amphiprion_percula
ENSGMOG00000000629scrt1b9664.935ENSATEG00000023998scrt29665.260Anabas_testudineus
ENSGMOG00000000629scrt1b9652.885ENSATEG00000003195-9652.885Anabas_testudineus
ENSGMOG00000000629scrt1b10092.115ENSATEG00000002302scrt1b9992.115Anabas_testudineus
ENSGMOG00000000629scrt1b9975.088ENSATEG00000011660-9975.088Anabas_testudineus
ENSGMOG00000000629scrt1b7776.526ENSACAG00000016109SCRT29576.526Anolis_carolinensis
ENSGMOG00000000629scrt1b9972.093ENSACLG00000012046-9972.093Astatotilapia_calliptera
ENSGMOG00000000629scrt1b10092.473ENSACLG00000007162scrt1b9992.473Astatotilapia_calliptera
ENSGMOG00000000629scrt1b9879.783ENSAMXG00000042624SCRT19979.783Astyanax_mexicanus
ENSGMOG00000000629scrt1b8475.630ENSAMXG00000034158scrt28675.630Astyanax_mexicanus
ENSGMOG00000000629scrt1b10081.004ENSAMXG00000038085scrt1a9982.143Astyanax_mexicanus
ENSGMOG00000000629scrt1b5961.728WBGene00000468ces-16060.976Caenorhabditis_elegans
ENSGMOG00000000629scrt1b8661.847ENSCPBG00000027613SCRT29961.847Chrysemys_picta_bellii
ENSGMOG00000000629scrt1b9983.154ENSCPBG00000018899SCRT19983.154Chrysemys_picta_bellii
ENSGMOG00000000629scrt1b10092.473ENSCSEG00000008596scrt1b9992.473Cynoglossus_semilaevis
ENSGMOG00000000629scrt1b9975.084ENSCSEG00000014892-9875.084Cynoglossus_semilaevis
ENSGMOG00000000629scrt1b9666.225ENSCSEG00000021542scrt29666.225Cynoglossus_semilaevis
ENSGMOG00000000629scrt1b9975.251ENSCVAG00000003190-9975.251Cyprinodon_variegatus
ENSGMOG00000000629scrt1b9664.286ENSCVAG00000021038scrt29664.286Cyprinodon_variegatus
ENSGMOG00000000629scrt1b10092.115ENSCVAG00000009561scrt1b9992.115Cyprinodon_variegatus
ENSGMOG00000000629scrt1b10083.929ENSDARG00000040214scrt1b9983.929Danio_rerio
ENSGMOG00000000629scrt1b10084.286ENSDARG00000100821scrt1a9984.286Danio_rerio
ENSGMOG00000000629scrt1b9765.886ENSELUG00000023883scrt29864.262Esox_lucius
ENSGMOG00000000629scrt1b9986.022ENSELUG00000022228scrt1a9986.022Esox_lucius
ENSGMOG00000000629scrt1b9986.643ENSELUG00000005435scrt1b9886.643Esox_lucius
ENSGMOG00000000629scrt1b8472.414ENSFALG00000005718SCRT29672.414Ficedula_albicollis
ENSGMOG00000000629scrt1b9659.851ENSFDAG00000008733SCRT19659.851Fukomys_damarensis
ENSGMOG00000000629scrt1b10092.832ENSFHEG00000014820scrt1b9992.832Fundulus_heteroclitus
ENSGMOG00000000629scrt1b9669.455ENSFHEG00000005732scrt29669.455Fundulus_heteroclitus
ENSGMOG00000000629scrt1b9975.920ENSFHEG00000009794-9975.920Fundulus_heteroclitus
ENSGMOG00000000629scrt1b8470.996ENSGALG00000028912SCRT29664.945Gallus_gallus
ENSGMOG00000000629scrt1b10092.473ENSGAFG00000007636scrt1b9992.473Gambusia_affinis
ENSGMOG00000000629scrt1b9666.892ENSGAFG00000003093scrt29666.892Gambusia_affinis
ENSGMOG00000000629scrt1b9975.177ENSGAFG00000009650-9975.177Gambusia_affinis
ENSGMOG00000000629scrt1b10092.727ENSGACG00000008982scrt1b9992.727Gasterosteus_aculeatus
ENSGMOG00000000629scrt1b9974.830ENSGACG00000004072-9974.830Gasterosteus_aculeatus
ENSGMOG00000000629scrt1b6482.386ENSGAGG00000020760-6882.386Gopherus_agassizii
ENSGMOG00000000629scrt1b9663.636ENSGAGG00000020761SCRT28270.996Gopherus_agassizii
ENSGMOG00000000629scrt1b9983.394ENSGAGG00000011736SCRT19983.394Gopherus_agassizii
ENSGMOG00000000629scrt1b9667.636ENSHBUG00000012492scrt29667.636Haplochromis_burtoni
ENSGMOG00000000629scrt1b9974.161ENSHBUG00000019101-9974.161Haplochromis_burtoni
ENSGMOG00000000629scrt1b10092.473ENSHBUG00000016621scrt1b9992.473Haplochromis_burtoni
ENSGMOG00000000629scrt1b9665.068ENSHCOG00000008116scrt29665.068Hippocampus_comes
ENSGMOG00000000629scrt1b9967.361ENSHCOG00000016179-9967.708Hippocampus_comes
ENSGMOG00000000629scrt1b10090.681ENSHCOG00000016704scrt1b9990.681Hippocampus_comes
ENSGMOG00000000629scrt1b9877.372ENSIPUG00000005547-9977.372Ictalurus_punctatus
ENSGMOG00000000629scrt1b9983.813ENSIPUG00000004551scrt1a9983.813Ictalurus_punctatus
ENSGMOG00000000629scrt1b5184.397ENSSTOG00000032944SCRT28479.618Ictidomys_tridecemlineatus
ENSGMOG00000000629scrt1b9665.260ENSKMAG00000018087scrt29665.260Kryptolebias_marmoratus
ENSGMOG00000000629scrt1b10092.832ENSKMAG00000005484scrt1b9992.832Kryptolebias_marmoratus
ENSGMOG00000000629scrt1b9973.579ENSKMAG00000009489-9975.251Kryptolebias_marmoratus
ENSGMOG00000000629scrt1b9974.074ENSLBEG00000023388-9975.084Labrus_bergylta
ENSGMOG00000000629scrt1b9665.049ENSLBEG00000015419scrt29665.049Labrus_bergylta
ENSGMOG00000000629scrt1b10083.929ENSLACG00000003588SCRT19983.929Latimeria_chalumnae
ENSGMOG00000000629scrt1b10086.429ENSLOCG00000007573scrt1b9986.429Lepisosteus_oculatus
ENSGMOG00000000629scrt1b9652.922ENSLOCG00000002246scrt29752.922Lepisosteus_oculatus
ENSGMOG00000000629scrt1b10092.115ENSMAMG00000011698scrt1b9992.115Mastacembelus_armatus
ENSGMOG00000000629scrt1b9664.610ENSMAMG00000001291scrt29664.610Mastacembelus_armatus
ENSGMOG00000000629scrt1b9667.636ENSMZEG00005026445scrt29667.636Maylandia_zebra
ENSGMOG00000000629scrt1b9974.161ENSMZEG00005026702-9974.161Maylandia_zebra
ENSGMOG00000000629scrt1b10092.473ENSMZEG00005005627scrt1b9992.473Maylandia_zebra
ENSGMOG00000000629scrt1b8470.996ENSMGAG00000016579SCRT29670.996Meleagris_gallopavo
ENSGMOG00000000629scrt1b9975.920ENSMMOG00000018345-9975.920Mola_mola
ENSGMOG00000000629scrt1b10091.039ENSMMOG00000003327scrt1b9991.039Mola_mola
ENSGMOG00000000629scrt1b9665.246ENSMMOG00000009272scrt29665.574Mola_mola
ENSGMOG00000000629scrt1b10092.115ENSMALG00000012704scrt1b9992.115Monopterus_albus
ENSGMOG00000000629scrt1b8473.840ENSMALG00000013656scrt28273.840Monopterus_albus
ENSGMOG00000000629scrt1b6568.108ENSNGAG00000020815Scrt29466.154Nannospalax_galili
ENSGMOG00000000629scrt1b9667.273ENSNBRG00000007221scrt29667.273Neolamprologus_brichardi
ENSGMOG00000000629scrt1b10088.172ENSNBRG00000013983scrt1b9988.172Neolamprologus_brichardi
ENSGMOG00000000629scrt1b9973.826ENSNBRG00000014882-9973.826Neolamprologus_brichardi
ENSGMOG00000000629scrt1b10091.756ENSONIG00000006007scrt1b9991.756Oreochromis_niloticus
ENSGMOG00000000629scrt1b9670.724ENSONIG00000019809-9970.724Oreochromis_niloticus
ENSGMOG00000000629scrt1b9661.011ENSONIG00000003152-9661.011Oreochromis_niloticus
ENSGMOG00000000629scrt1b9664.286ENSONIG00000016758scrt29664.286Oreochromis_niloticus
ENSGMOG00000000629scrt1b9664.935ENSORLG00000024051scrt29664.935Oryzias_latipes
ENSGMOG00000000629scrt1b9972.667ENSORLG00000022825-9972.667Oryzias_latipes
ENSGMOG00000000629scrt1b10091.756ENSORLG00000025651scrt1b9991.756Oryzias_latipes
ENSGMOG00000000629scrt1b9664.935ENSORLG00020011478scrt29664.935Oryzias_latipes_hni
ENSGMOG00000000629scrt1b10091.756ENSORLG00020012967scrt1b9991.756Oryzias_latipes_hni
ENSGMOG00000000629scrt1b9972.667ENSORLG00015010104-9972.667Oryzias_latipes_hsok
ENSGMOG00000000629scrt1b9664.935ENSORLG00015005524scrt29664.935Oryzias_latipes_hsok
ENSGMOG00000000629scrt1b10091.756ENSORLG00015019165scrt1b9991.756Oryzias_latipes_hsok
ENSGMOG00000000629scrt1b9975.168ENSOMEG00000000286-9975.168Oryzias_melastigma
ENSGMOG00000000629scrt1b9664.935ENSOMEG00000002661scrt29664.935Oryzias_melastigma
ENSGMOG00000000629scrt1b10091.756ENSOMEG00000003925scrt1b9991.756Oryzias_melastigma
ENSGMOG00000000629scrt1b10084.286ENSPKIG00000020085scrt1a9984.286Paramormyrops_kingsleyae
ENSGMOG00000000629scrt1b10085.000ENSPKIG00000022303SCRT19985.000Paramormyrops_kingsleyae
ENSGMOG00000000629scrt1b10088.530ENSPMGG00000002260scrt1b9988.530Periophthalmus_magnuspinnatus
ENSGMOG00000000629scrt1b9974.150ENSPMGG00000021402-9974.150Periophthalmus_magnuspinnatus
ENSGMOG00000000629scrt1b9669.708ENSPMGG00000016561scrt29669.708Periophthalmus_magnuspinnatus
ENSGMOG00000000629scrt1b9664.610ENSPFOG00000007738scrt29664.610Poecilia_formosa
ENSGMOG00000000629scrt1b10092.473ENSPFOG00000017719scrt1b9992.473Poecilia_formosa
ENSGMOG00000000629scrt1b9976.014ENSPFOG00000005616-9976.014Poecilia_formosa
ENSGMOG00000000629scrt1b9976.014ENSPLAG00000011718-9976.014Poecilia_latipinna
ENSGMOG00000000629scrt1b9669.928ENSPLAG00000005765scrt29669.928Poecilia_latipinna
ENSGMOG00000000629scrt1b10092.473ENSPLAG00000009876scrt1b9992.473Poecilia_latipinna
ENSGMOG00000000629scrt1b10092.473ENSPMEG00000013274scrt1b9992.473Poecilia_mexicana
ENSGMOG00000000629scrt1b9976.014ENSPMEG00000011706-9976.014Poecilia_mexicana
ENSGMOG00000000629scrt1b9669.928ENSPMEG00000001538scrt29669.928Poecilia_mexicana
ENSGMOG00000000629scrt1b9975.338ENSPREG00000012166-9975.338Poecilia_reticulata
ENSGMOG00000000629scrt1b9664.286ENSPREG00000001147scrt29664.286Poecilia_reticulata
ENSGMOG00000000629scrt1b10092.473ENSPREG00000018985scrt1b9992.473Poecilia_reticulata
ENSGMOG00000000629scrt1b10092.473ENSPNYG00000017733scrt1b9992.473Pundamilia_nyererei
ENSGMOG00000000629scrt1b9974.161ENSPNYG00000008865-9974.161Pundamilia_nyererei
ENSGMOG00000000629scrt1b9667.636ENSPNYG00000013109scrt29667.636Pundamilia_nyererei
ENSGMOG00000000629scrt1b10083.214ENSPNAG00000017415scrt1a9983.214Pygocentrus_nattereri
ENSGMOG00000000629scrt1b9881.522ENSPNAG00000027880-9981.522Pygocentrus_nattereri
ENSGMOG00000000629scrt1b10084.286ENSSFOG00015001195SCRT19984.286Scleropages_formosus
ENSGMOG00000000629scrt1b9992.086ENSSMAG00000019207scrt1b9992.086Scophthalmus_maximus
ENSGMOG00000000629scrt1b9974.086ENSSMAG00000005122-9974.086Scophthalmus_maximus
ENSGMOG00000000629scrt1b9975.585ENSSDUG00000013215-9975.585Seriola_dumerili
ENSGMOG00000000629scrt1b9864.310ENSSDUG00000001637scrt29664.310Seriola_dumerili
ENSGMOG00000000629scrt1b10092.832ENSSDUG00000007752scrt1b9992.832Seriola_dumerili
ENSGMOG00000000629scrt1b9975.585ENSSLDG00000016454-9975.585Seriola_lalandi_dorsalis
ENSGMOG00000000629scrt1b9664.610ENSSLDG00000013565scrt29664.610Seriola_lalandi_dorsalis
ENSGMOG00000000629scrt1b10092.832ENSSLDG00000017166scrt1b9992.832Seriola_lalandi_dorsalis
ENSGMOG00000000629scrt1b9665.799ENSSPUG00000018637SCRT29665.799Sphenodon_punctatus
ENSGMOG00000000629scrt1b9974.247ENSSPAG00000006788-9975.920Stegastes_partitus
ENSGMOG00000000629scrt1b10092.832ENSSPAG00000002200scrt1b9992.832Stegastes_partitus
ENSGMOG00000000629scrt1b9668.364ENSSPAG00000014018scrt29668.364Stegastes_partitus
ENSGMOG00000000629scrt1b8472.294ENSTGUG00000006801SCRT29972.294Taeniopygia_guttata
ENSGMOG00000000629scrt1b8780.328ENSTRUG00000019558-8180.328Takifugu_rubripes
ENSGMOG00000000629scrt1b9892.336ENSTRUG00000011637scrt1b9992.336Takifugu_rubripes
ENSGMOG00000000629scrt1b9666.897ENSTRUG00000007620scrt29666.897Takifugu_rubripes
ENSGMOG00000000629scrt1b9975.421ENSTRUG00000012719-9975.421Takifugu_rubripes
ENSGMOG00000000629scrt1b10091.756ENSTNIG00000018384scrt1b9991.756Tetraodon_nigroviridis
ENSGMOG00000000629scrt1b9670.504ENSTNIG00000012473scrt29670.504Tetraodon_nigroviridis
ENSGMOG00000000629scrt1b9975.177ENSXCOG00000019861-9975.177Xiphophorus_couchianus
ENSGMOG00000000629scrt1b9667.230ENSXCOG00000014367scrt29667.230Xiphophorus_couchianus
ENSGMOG00000000629scrt1b10092.832ENSXCOG00000019675scrt1b9992.832Xiphophorus_couchianus
ENSGMOG00000000629scrt1b10092.832ENSXMAG00000027885scrt1b9992.832Xiphophorus_maculatus
ENSGMOG00000000629scrt1b9976.351ENSXMAG00000015353-9976.351Xiphophorus_maculatus
ENSGMOG00000000629scrt1b9664.935ENSXMAG00000028567scrt29664.935Xiphophorus_maculatus

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