EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000000659 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 13941 bases
Position: chrGeneScaffold_301:12931-26871
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000000673	POP1	PF06978.11	2.5e-27	1	2
ENSGMOP00000000673	POP1	PF06978.11	2.5e-27	2	2
ENSGMOP00000000673	POPLD	PF08170.12	1.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000000704	POP1-201	2844	-	ENSGMOP00000000673	947 (aa)	-	UPI00023EF689

Gene Model

Click here to download ENSGMOG00000000659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000000659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000000659	POP1	98	45.998	ENSG00000104356	POP1	93	45.998	Homo_sapiens
ENSGMOG00000000659	POP1	100	63.847	ENSAPOG00000008198	pop1	100	64.250	Acanthochromis_polyacanthus
ENSGMOG00000000659	POP1	99	45.090	ENSAMEG00000000556	POP1	94	45.190	Ailuropoda_melanoleuca
ENSGMOG00000000659	POP1	100	61.197	ENSACIG00000004169	POP1	100	60.888	Amphilophus_citrinellus
ENSGMOG00000000659	POP1	100	61.806	ENSAOCG00000010991	pop1	100	62.638	Amphiprion_ocellaris
ENSGMOG00000000659	POP1	100	58.901	ENSAPEG00000007607	pop1	100	59.194	Amphiprion_percula
ENSGMOG00000000659	POP1	100	63.765	ENSATEG00000024814	POP1	100	64.235	Anabas_testudineus
ENSGMOG00000000659	POP1	97	45.361	ENSAPLG00000014418	POP1	99	45.670	Anas_platyrhynchos
ENSGMOG00000000659	POP1	95	46.331	ENSACAG00000016083	POP1	100	43.863	Anolis_carolinensis
ENSGMOG00000000659	POP1	83	57.088	ENSANAG00000026360	POP1	91	57.088	Aotus_nancymaae
ENSGMOG00000000659	POP1	100	61.771	ENSACLG00000010951	pop1	100	62.475	Astatotilapia_calliptera
ENSGMOG00000000659	POP1	100	54.286	ENSAMXG00000014483	POP1	100	54.089	Astyanax_mexicanus
ENSGMOG00000000659	POP1	91	52.615	ENSBTAG00000012596	POP1	92	46.687	Bos_taurus
ENSGMOG00000000659	POP1	97	46.701	ENSCJAG00000015567	POP1	93	46.598	Callithrix_jacchus
ENSGMOG00000000659	POP1	99	46.694	ENSCAFG00000000469	POP1	95	46.585	Canis_familiaris
ENSGMOG00000000659	POP1	99	45.563	ENSCAFG00020026765	POP1	95	45.455	Canis_lupus_dingo
ENSGMOG00000000659	POP1	97	46.998	ENSCHIG00000017066	POP1	92	46.791	Capra_hircus
ENSGMOG00000000659	POP1	99	45.320	ENSTSYG00000003097	POP1	95	45.364	Carlito_syrichta
ENSGMOG00000000659	POP1	99	44.191	ENSCAPG00000007251	POP1	95	44.246	Cavia_aperea
ENSGMOG00000000659	POP1	99	45.120	ENSCPOG00000002901	POP1	95	45.174	Cavia_porcellus
ENSGMOG00000000659	POP1	100	45.481	ENSCCAG00000018939	POP1	100	45.385	Cebus_capucinus
ENSGMOG00000000659	POP1	98	45.888	ENSCATG00000040916	POP1	93	45.381	Cercocebus_atys
ENSGMOG00000000659	POP1	98	45.657	ENSCLAG00000007208	POP1	90	46.020	Chinchilla_lanigera
ENSGMOG00000000659	POP1	94	46.251	ENSCSAG00000012340	POP1	98	45.998	Chlorocebus_sabaeus
ENSGMOG00000000659	POP1	99	43.284	ENSCHOG00000011432	POP1	99	43.383	Choloepus_hoffmanni
ENSGMOG00000000659	POP1	100	45.709	ENSCPBG00000006373	POP1	92	48.240	Chrysemys_picta_bellii
ENSGMOG00000000659	POP1	90	30.375	ENSCING00000008323	-	92	30.375	Ciona_intestinalis
ENSGMOG00000000659	POP1	94	51.278	ENSCANG00000001647	POP1	85	51.278	Colobus_angolensis_palliatus
ENSGMOG00000000659	POP1	98	44.902	ENSCGRG00001017308	Pop1	93	44.799	Cricetulus_griseus_chok1gshd
ENSGMOG00000000659	POP1	100	41.543	ENSCGRG00000010824	Pop1	100	41.437	Cricetulus_griseus_crigri
ENSGMOG00000000659	POP1	100	60.775	ENSCSEG00000008737	POP1	100	61.384	Cynoglossus_semilaevis
ENSGMOG00000000659	POP1	100	60.878	ENSCVAG00000022248	pop1	100	61.929	Cyprinodon_variegatus
ENSGMOG00000000659	POP1	50	53.975	ENSDARG00000102087	pop1	97	53.975	Danio_rerio
ENSGMOG00000000659	POP1	98	43.439	ENSDNOG00000019974	POP1	93	43.483	Dasypus_novemcinctus
ENSGMOG00000000659	POP1	91	43.966	ENSDORG00000015384	Pop1	91	43.966	Dipodomys_ordii
ENSGMOG00000000659	POP1	74	30.663	FBgn0026702	l(1)G0045	79	30.567	Drosophila_melanogaster
ENSGMOG00000000659	POP1	86	44.660	ENSETEG00000007839	POP1	82	44.660	Echinops_telfairi
ENSGMOG00000000659	POP1	99	45.700	ENSEASG00005003189	POP1	93	45.700	Equus_asinus_asinus
ENSGMOG00000000659	POP1	99	45.683	ENSECAG00000024236	POP1	95	45.800	Equus_caballus
ENSGMOG00000000659	POP1	51	73.846	ENSEEUG00000003050	-	53	73.846	Erinaceus_europaeus
ENSGMOG00000000659	POP1	100	57.746	ENSELUG00000003526	pop1	99	57.758	Esox_lucius
ENSGMOG00000000659	POP1	97	46.170	ENSFCAG00000002168	POP1	92	46.488	Felis_catus
ENSGMOG00000000659	POP1	100	43.353	ENSFALG00000005711	POP1	100	43.654	Ficedula_albicollis
ENSGMOG00000000659	POP1	98	45.325	ENSFDAG00000017068	POP1	93	45.325	Fukomys_damarensis
ENSGMOG00000000659	POP1	100	62.118	ENSFHEG00000019518	pop1	100	62.385	Fundulus_heteroclitus
ENSGMOG00000000659	POP1	100	58.659	ENSGAFG00000019770	POP1	100	58.676	Gambusia_affinis
ENSGMOG00000000659	POP1	100	59.273	ENSGACG00000003499	pop1	95	60.887	Gasterosteus_aculeatus
ENSGMOG00000000659	POP1	95	48.349	ENSGAGG00000011737	POP1	90	48.063	Gopherus_agassizii
ENSGMOG00000000659	POP1	98	45.657	ENSGGOG00000003176	POP1	93	45.990	Gorilla_gorilla
ENSGMOG00000000659	POP1	100	61.771	ENSHBUG00000021583	pop1	100	62.475	Haplochromis_burtoni
ENSGMOG00000000659	POP1	100	45.309	ENSHGLG00000006029	POP1	95	45.210	Heterocephalus_glaber_female
ENSGMOG00000000659	POP1	100	45.309	ENSHGLG00100016879	POP1	95	45.210	Heterocephalus_glaber_male
ENSGMOG00000000659	POP1	100	59.429	ENSHCOG00000013888	pop1	100	59.674	Hippocampus_comes
ENSGMOG00000000659	POP1	100	52.663	ENSIPUG00000018336	pop1	100	52.174	Ictalurus_punctatus
ENSGMOG00000000659	POP1	99	46.215	ENSSTOG00000011455	POP1	92	46.215	Ictidomys_tridecemlineatus
ENSGMOG00000000659	POP1	99	44.229	ENSJJAG00000013325	Pop1	94	44.582	Jaculus_jaculus
ENSGMOG00000000659	POP1	100	62.462	ENSKMAG00000001346	POP1	100	62.564	Kryptolebias_marmoratus
ENSGMOG00000000659	POP1	100	59.049	ENSLBEG00000024457	POP1	100	59.049	Labrus_bergylta
ENSGMOG00000000659	POP1	97	48.381	ENSLACG00000012498	POP1	99	48.381	Latimeria_chalumnae
ENSGMOG00000000659	POP1	99	52.367	ENSLOCG00000009817	POP1	99	52.418	Lepisosteus_oculatus
ENSGMOG00000000659	POP1	97	46.217	ENSLAFG00000010770	POP1	91	46.949	Loxodonta_africana
ENSGMOG00000000659	POP1	98	45.888	ENSMFAG00000000347	POP1	93	45.381	Macaca_fascicularis
ENSGMOG00000000659	POP1	98	46.006	ENSMNEG00000036870	POP1	93	45.501	Macaca_nemestrina
ENSGMOG00000000659	POP1	98	45.685	ENSMLEG00000034986	POP1	93	45.482	Mandrillus_leucophaeus
ENSGMOG00000000659	POP1	100	62.915	ENSMAMG00000004040	pop1	100	62.915	Mastacembelus_armatus
ENSGMOG00000000659	POP1	100	61.771	ENSMZEG00005025448	pop1	100	62.475	Maylandia_zebra
ENSGMOG00000000659	POP1	95	44.467	ENSMGAG00000012167	POP1	100	42.214	Meleagris_gallopavo
ENSGMOG00000000659	POP1	97	46.162	ENSMAUG00000017537	Pop1	92	46.058	Mesocricetus_auratus
ENSGMOG00000000659	POP1	98	45.040	ENSMICG00000004361	POP1	94	44.939	Microcebus_murinus
ENSGMOG00000000659	POP1	97	46.458	ENSMOCG00000006356	Pop1	92	46.273	Microtus_ochrogaster
ENSGMOG00000000659	POP1	100	58.929	ENSMMOG00000018242	pop1	100	58.929	Mola_mola
ENSGMOG00000000659	POP1	97	46.162	ENSMODG00000006561	POP1	93	45.628	Monodelphis_domestica
ENSGMOG00000000659	POP1	100	61.756	ENSMALG00000012621	POP1	100	61.616	Monopterus_albus
ENSGMOG00000000659	POP1	97	45.361	MGP_CAROLIEiJ_G0019726	Pop1	92	45.155	Mus_caroli
ENSGMOG00000000659	POP1	97	45.201	ENSMUSG00000022325	Pop1	92	44.995	Mus_musculus
ENSGMOG00000000659	POP1	97	44.720	MGP_PahariEiJ_G0019735	Pop1	92	44.720	Mus_pahari
ENSGMOG00000000659	POP1	97	45.379	MGP_SPRETEiJ_G0020622	Pop1	92	45.171	Mus_spretus
ENSGMOG00000000659	POP1	99	46.493	ENSMPUG00000015250	POP1	95	45.808	Mustela_putorius_furo
ENSGMOG00000000659	POP1	97	45.361	ENSMLUG00000010204	POP1	92	45.201	Myotis_lucifugus
ENSGMOG00000000659	POP1	98	45.224	ENSNGAG00000001582	Pop1	93	45.325	Nannospalax_galili
ENSGMOG00000000659	POP1	100	60.125	ENSNBRG00000002356	pop1	100	59.563	Neolamprologus_brichardi
ENSGMOG00000000659	POP1	98	45.804	ENSNLEG00000002541	POP1	93	45.804	Nomascus_leucogenys
ENSGMOG00000000659	POP1	86	50.413	ENSMEUG00000003118	POP1	83	50.413	Notamacropus_eugenii
ENSGMOG00000000659	POP1	99	46.255	ENSOPRG00000007667	POP1	94	46.006	Ochotona_princeps
ENSGMOG00000000659	POP1	99	46.361	ENSODEG00000003984	POP1	95	46.300	Octodon_degus
ENSGMOG00000000659	POP1	100	62.059	ENSONIG00000016445	pop1	100	61.847	Oreochromis_niloticus
ENSGMOG00000000659	POP1	54	59.091	ENSOANG00000001278	-	86	47.000	Ornithorhynchus_anatinus
ENSGMOG00000000659	POP1	95	50.373	ENSOCUG00000017400	POP1	85	50.373	Oryctolagus_cuniculus
ENSGMOG00000000659	POP1	100	62.641	ENSORLG00000002839	pop1	100	62.680	Oryzias_latipes
ENSGMOG00000000659	POP1	100	59.697	ENSORLG00020022450	POP1	100	59.151	Oryzias_latipes_hni
ENSGMOG00000000659	POP1	100	61.366	ENSORLG00015012746	POP1	100	62.513	Oryzias_latipes_hsok
ENSGMOG00000000659	POP1	100	60.674	ENSOMEG00000006915	pop1	99	61.083	Oryzias_melastigma
ENSGMOG00000000659	POP1	98	45.070	ENSOGAG00000001466	POP1	93	44.747	Otolemur_garnettii
ENSGMOG00000000659	POP1	98	45.990	ENSPPAG00000018410	POP1	93	45.990	Pan_paniscus
ENSGMOG00000000659	POP1	97	45.965	ENSPPRG00000005002	POP1	92	46.178	Panthera_pardus
ENSGMOG00000000659	POP1	97	47.059	ENSPTIG00000016527	POP1	92	46.798	Panthera_tigris_altaica
ENSGMOG00000000659	POP1	98	46.099	ENSPTRG00000020458	POP1	93	46.099	Pan_troglodytes
ENSGMOG00000000659	POP1	98	45.888	ENSPANG00000009704	POP1	93	45.685	Papio_anubis
ENSGMOG00000000659	POP1	100	55.600	ENSPKIG00000016325	POP1	100	55.279	Paramormyrops_kingsleyae
ENSGMOG00000000659	POP1	95	47.034	ENSPSIG00000012343	POP1	91	46.771	Pelodiscus_sinensis
ENSGMOG00000000659	POP1	100	57.143	ENSPMGG00000022253	POP1	100	57.344	Periophthalmus_magnuspinnatus
ENSGMOG00000000659	POP1	97	45.371	ENSPEMG00000023633	Pop1	92	45.371	Peromyscus_maniculatus_bairdii
ENSGMOG00000000659	POP1	94	41.207	ENSPMAG00000003209	POP1	99	41.009	Petromyzon_marinus
ENSGMOG00000000659	POP1	91	51.703	ENSPCIG00000012216	POP1	91	45.520	Phascolarctos_cinereus
ENSGMOG00000000659	POP1	100	58.184	ENSPFOG00000012490	POP1	100	58.683	Poecilia_formosa
ENSGMOG00000000659	POP1	100	58.442	ENSPLAG00000004646	POP1	100	58.941	Poecilia_latipinna
ENSGMOG00000000659	POP1	100	59.031	ENSPMEG00000019592	POP1	100	59.536	Poecilia_mexicana
ENSGMOG00000000659	POP1	100	59.159	ENSPREG00000020951	POP1	100	59.259	Poecilia_reticulata
ENSGMOG00000000659	POP1	98	45.685	ENSPPYG00000018777	POP1	93	45.685	Pongo_abelii
ENSGMOG00000000659	POP1	97	44.479	ENSPCAG00000016662	POP1	92	44.284	Procavia_capensis
ENSGMOG00000000659	POP1	99	44.755	ENSPCOG00000019420	POP1	95	44.622	Propithecus_coquereli
ENSGMOG00000000659	POP1	97	46.130	ENSPVAG00000014468	POP1	92	46.074	Pteropus_vampyrus
ENSGMOG00000000659	POP1	100	61.070	ENSPNYG00000004476	pop1	100	61.070	Pundamilia_nyererei
ENSGMOG00000000659	POP1	100	53.953	ENSPNAG00000000265	pop1	100	53.854	Pygocentrus_nattereri
ENSGMOG00000000659	POP1	98	44.581	ENSRNOG00000005243	Pop1	93	44.479	Rattus_norvegicus
ENSGMOG00000000659	POP1	98	46.091	ENSRBIG00000007996	POP1	93	46.091	Rhinopithecus_bieti
ENSGMOG00000000659	POP1	98	46.091	ENSRROG00000012334	POP1	93	46.091	Rhinopithecus_roxellana
ENSGMOG00000000659	POP1	97	46.336	ENSSBOG00000020830	POP1	93	46.130	Saimiri_boliviensis_boliviensis
ENSGMOG00000000659	POP1	99	46.869	ENSSHAG00000000296	POP1	93	46.768	Sarcophilus_harrisii
ENSGMOG00000000659	POP1	100	56.269	ENSSFOG00015007429	pop1	99	56.269	Scleropages_formosus
ENSGMOG00000000659	POP1	100	63.732	ENSSMAG00000010467	POP1	100	63.770	Scophthalmus_maximus
ENSGMOG00000000659	POP1	100	63.437	ENSSDUG00000007817	POP1	100	63.190	Seriola_dumerili
ENSGMOG00000000659	POP1	100	63.290	ENSSLDG00000012565	POP1	100	62.751	Seriola_lalandi_dorsalis
ENSGMOG00000000659	POP1	97	44.283	ENSSPUG00000003550	-	92	44.283	Sphenodon_punctatus
ENSGMOG00000000659	POP1	100	61.737	ENSSPAG00000014955	pop1	100	61.634	Stegastes_partitus
ENSGMOG00000000659	POP1	97	47.089	ENSSSCG00000006078	POP1	92	46.778	Sus_scrofa
ENSGMOG00000000659	POP1	97	41.969	ENSTGUG00000012011	-	100	41.969	Taeniopygia_guttata
ENSGMOG00000000659	POP1	100	60.637	ENSTRUG00000010856	pop1	100	60.575	Takifugu_rubripes
ENSGMOG00000000659	POP1	97	60.537	ENSTNIG00000013297	pop1	99	60.950	Tetraodon_nigroviridis
ENSGMOG00000000659	POP1	99	42.787	ENSTBEG00000014214	POP1	99	43.028	Tupaia_belangeri
ENSGMOG00000000659	POP1	97	45.398	ENSTTRG00000016071	POP1	92	45.398	Tursiops_truncatus
ENSGMOG00000000659	POP1	95	46.702	ENSUAMG00000017309	POP1	94	46.806	Ursus_americanus
ENSGMOG00000000659	POP1	87	58.824	ENSUMAG00000016952	POP1	91	58.824	Ursus_maritimus
ENSGMOG00000000659	POP1	82	53.030	ENSVPAG00000008278	POP1	74	53.030	Vicugna_pacos
ENSGMOG00000000659	POP1	98	45.694	ENSVVUG00000010994	POP1	93	45.694	Vulpes_vulpes
ENSGMOG00000000659	POP1	100	51.383	ENSXCOG00000017043	POP1	100	51.680	Xiphophorus_couchianus
ENSGMOG00000000659	POP1	100	58.524	ENSXMAG00000002472	POP1	100	58.524	Xiphophorus_maculatus