EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000000718 (Gene tree)
Gene ID: -
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1 ribosome biogenesis factor
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 21261 bases
Position: chrGeneScaffold_3224:95113-116373
Accession: ZDB-GENE-060720-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000000756	AARP2CN	PF08142.12	4.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000000788	-	3492	-	ENSGMOP00000000756	1163 (aa)	-	UPI00023EF6CF

Gene Model

Click here to download ENSGMOG00000000718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000000718's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000000718	bms1	99	63.851	ENSG00000165733	BMS1	88	65.696	Homo_sapiens
ENSGMOG00000000718	bms1	77	78.115	ENSAPOG00000002296	bms1	99	70.544	Acanthochromis_polyacanthus
ENSGMOG00000000718	bms1	88	74.146	ENSAMEG00000016834	BMS1	90	65.113	Ailuropoda_melanoleuca
ENSGMOG00000000718	bms1	97	75.962	ENSACIG00000002588	bms1	99	69.825	Amphilophus_citrinellus
ENSGMOG00000000718	bms1	53	79.187	ENSAOCG00000018088	bms1	99	72.111	Amphiprion_ocellaris
ENSGMOG00000000718	bms1	53	78.150	ENSAPEG00000014673	bms1	99	71.629	Amphiprion_percula
ENSGMOG00000000718	bms1	99	71.135	ENSATEG00000023465	bms1	99	71.464	Anabas_testudineus
ENSGMOG00000000718	bms1	93	65.940	ENSAPLG00000003759	BMS1	90	65.940	Anas_platyrhynchos
ENSGMOG00000000718	bms1	88	72.573	ENSACAG00000004537	-	94	63.372	Anolis_carolinensis
ENSGMOG00000000718	bms1	87	73.529	ENSANAG00000023432	BMS1	89	64.668	Aotus_nancymaae
ENSGMOG00000000718	bms1	99	70.033	ENSACLG00000001294	bms1	99	71.285	Astatotilapia_calliptera
ENSGMOG00000000718	bms1	88	79.506	ENSAMXG00000011236	bms1	94	72.154	Astyanax_mexicanus
ENSGMOG00000000718	bms1	96	66.126	ENSBTAG00000012878	BMS1	89	66.238	Bos_taurus
ENSGMOG00000000718	bms1	84	55.405	WBGene00022021	Y61A9LA.10	94	55.525	Caenorhabditis_elegans
ENSGMOG00000000718	bms1	87	73.775	ENSCJAG00000021705	BMS1	89	65.964	Callithrix_jacchus
ENSGMOG00000000718	bms1	96	65.484	ENSCAFG00000007114	BMS1	89	65.484	Canis_familiaris
ENSGMOG00000000718	bms1	96	65.484	ENSCAFG00020025282	BMS1	89	65.484	Canis_lupus_dingo
ENSGMOG00000000718	bms1	88	75.245	ENSCHIG00000023251	BMS1	89	66.399	Capra_hircus
ENSGMOG00000000718	bms1	96	63.281	ENSCAPG00000008652	BMS1	87	63.473	Cavia_aperea
ENSGMOG00000000718	bms1	96	64.397	ENSCPOG00000000502	BMS1	87	65.210	Cavia_porcellus
ENSGMOG00000000718	bms1	87	57.353	ENSCCAG00000024969	-	88	56.220	Cebus_capucinus
ENSGMOG00000000718	bms1	96	65.049	ENSCATG00000030625	-	86	67.269	Cercocebus_atys
ENSGMOG00000000718	bms1	73	54.688	ENSCATG00000008695	-	80	55.804	Cercocebus_atys
ENSGMOG00000000718	bms1	96	64.563	ENSCLAG00000002446	BMS1	91	62.928	Chinchilla_lanigera
ENSGMOG00000000718	bms1	96	65.534	ENSCSAG00000011118	BMS1	88	65.696	Chlorocebus_sabaeus
ENSGMOG00000000718	bms1	88	72.727	ENSCHOG00000011055	BMS1	87	64.355	Choloepus_hoffmanni
ENSGMOG00000000718	bms1	96	65.430	ENSCPBG00000025581	BMS1	93	62.920	Chrysemys_picta_bellii
ENSGMOG00000000718	bms1	87	60.437	ENSCING00000003181	-	98	51.983	Ciona_intestinalis
ENSGMOG00000000718	bms1	75	53.071	ENSCSAVG00000004113	-	83	58.726	Ciona_savignyi
ENSGMOG00000000718	bms1	96	65.372	ENSCANG00000011609	BMS1	88	65.372	Colobus_angolensis_palliatus
ENSGMOG00000000718	bms1	91	75.253	ENSCGRG00001019461	Bms1	97	61.314	Cricetulus_griseus_chok1gshd
ENSGMOG00000000718	bms1	91	75.253	ENSCGRG00000009016	Bms1	96	61.314	Cricetulus_griseus_crigri
ENSGMOG00000000718	bms1	53	77.778	ENSCSEG00000002469	bms1	99	69.483	Cynoglossus_semilaevis
ENSGMOG00000000718	bms1	97	71.088	ENSCVAG00000008371	bms1	99	72.007	Cyprinodon_variegatus
ENSGMOG00000000718	bms1	55	71.275	ENSDARG00000054154	bms1	99	66.996	Danio_rerio
ENSGMOG00000000718	bms1	87	75.689	ENSDNOG00000015761	BMS1	89	65.640	Dasypus_novemcinctus
ENSGMOG00000000718	bms1	88	74.201	ENSDORG00000002982	Bms1	98	63.269	Dipodomys_ordii
ENSGMOG00000000718	bms1	55	42.919	FBgn0036686	CG7728	98	46.420	Drosophila_melanogaster
ENSGMOG00000000718	bms1	72	71.463	ENSETEG00000009554	BMS1	79	61.174	Echinops_telfairi
ENSGMOG00000000718	bms1	87	74.020	ENSEASG00005006894	BMS1	89	65.806	Equus_asinus_asinus
ENSGMOG00000000718	bms1	96	65.640	ENSECAG00000001358	BMS1	89	65.645	Equus_caballus
ENSGMOG00000000718	bms1	94	81.127	ENSELUG00000001756	bms1	99	69.167	Esox_lucius
ENSGMOG00000000718	bms1	95	74.510	ENSFCAG00000011220	BMS1	94	63.068	Felis_catus
ENSGMOG00000000718	bms1	96	65.705	ENSFALG00000006882	BMS1	88	65.865	Ficedula_albicollis
ENSGMOG00000000718	bms1	96	65.534	ENSFDAG00000001422	BMS1	87	65.534	Fukomys_damarensis
ENSGMOG00000000718	bms1	97	71.071	ENSFHEG00000003367	bms1	99	71.477	Fundulus_heteroclitus
ENSGMOG00000000718	bms1	87	74.631	ENSGALG00000002624	BMS1	88	66.614	Gallus_gallus
ENSGMOG00000000718	bms1	98	75.962	ENSGACG00000015334	bms1	89	75.962	Gasterosteus_aculeatus
ENSGMOG00000000718	bms1	97	66.132	ENSGAGG00000003467	BMS1	99	60.877	Gopherus_agassizii
ENSGMOG00000000718	bms1	99	70.148	ENSHBUG00000022628	bms1	99	71.236	Haplochromis_burtoni
ENSGMOG00000000718	bms1	97	65.428	ENSHGLG00000000477	BMS1	96	63.158	Heterocephalus_glaber_female
ENSGMOG00000000718	bms1	97	65.428	ENSHGLG00100002176	BMS1	96	63.158	Heterocephalus_glaber_male
ENSGMOG00000000718	bms1	99	69.623	ENSHCOG00000017604	bms1	99	70.008	Hippocampus_comes
ENSGMOG00000000718	bms1	89	78.818	ENSIPUG00000017855	bms1	99	65.339	Ictalurus_punctatus
ENSGMOG00000000718	bms1	90	73.775	ENSSTOG00000015063	BMS1	92	63.846	Ictidomys_tridecemlineatus
ENSGMOG00000000718	bms1	87	74.510	ENSJJAG00000017328	Bms1	89	65.806	Jaculus_jaculus
ENSGMOG00000000718	bms1	64	63.063	ENSKMAG00000021982	bms1	95	64.089	Kryptolebias_marmoratus
ENSGMOG00000000718	bms1	53	75.199	ENSLBEG00000028208	bms1	99	69.551	Labrus_bergylta
ENSGMOG00000000718	bms1	89	73.219	ENSLACG00000001600	BMS1	96	60.367	Latimeria_chalumnae
ENSGMOG00000000718	bms1	92	74.661	ENSLOCG00000012914	bms1	99	66.966	Lepisosteus_oculatus
ENSGMOG00000000718	bms1	99	64.725	ENSLAFG00000006250	BMS1	91	65.049	Loxodonta_africana
ENSGMOG00000000718	bms1	89	63.922	ENSMFAG00000037771	BMS1	98	62.524	Macaca_fascicularis
ENSGMOG00000000718	bms1	86	60.239	ENSMMUG00000007426	-	86	60.437	Macaca_mulatta
ENSGMOG00000000718	bms1	68	58.111	ENSMLEG00000029084	-	80	55.065	Mandrillus_leucophaeus
ENSGMOG00000000718	bms1	99	70.297	ENSMAMG00000020855	bms1	99	70.746	Mastacembelus_armatus
ENSGMOG00000000718	bms1	99	69.951	ENSMZEG00005005663	bms1	99	71.201	Maylandia_zebra
ENSGMOG00000000718	bms1	92	66.399	ENSMGAG00000001170	BMS1	90	66.455	Meleagris_gallopavo
ENSGMOG00000000718	bms1	87	75.253	ENSMAUG00000002195	Bms1	91	64.630	Mesocricetus_auratus
ENSGMOG00000000718	bms1	96	65.323	ENSMICG00000009977	BMS1	94	61.290	Microcebus_murinus
ENSGMOG00000000718	bms1	86	74.495	ENSMOCG00000002038	Bms1	89	64.887	Microtus_ochrogaster
ENSGMOG00000000718	bms1	97	71.354	ENSMMOG00000000977	bms1	99	71.233	Mola_mola
ENSGMOG00000000718	bms1	99	75.430	ENSMODG00000001177	BMS1	99	62.523	Monodelphis_domestica
ENSGMOG00000000718	bms1	99	70.173	ENSMALG00000009680	bms1	99	70.642	Monopterus_albus
ENSGMOG00000000718	bms1	82	58.830	MGP_CAROLIEiJ_G0028785	-	86	59.077	Mus_caroli
ENSGMOG00000000718	bms1	86	75.000	ENSMUSG00000030138	Bms1	93	64.706	Mus_musculus
ENSGMOG00000000718	bms1	86	74.747	MGP_PahariEiJ_G0022539	Bms1	93	63.780	Mus_pahari
ENSGMOG00000000718	bms1	95	75.000	MGP_SPRETEiJ_G0029816	Bms1	93	64.510	Mus_spretus
ENSGMOG00000000718	bms1	99	64.466	ENSMPUG00000017276	BMS1	92	62.822	Mustela_putorius_furo
ENSGMOG00000000718	bms1	96	64.620	ENSMLUG00000003260	BMS1	93	64.554	Myotis_lucifugus
ENSGMOG00000000718	bms1	91	65.316	ENSNGAG00000015258	Bms1	99	55.008	Nannospalax_galili
ENSGMOG00000000718	bms1	87	73.710	ENSNLEG00000015791	BMS1	88	63.916	Nomascus_leucogenys
ENSGMOG00000000718	bms1	87	73.956	ENSOPRG00000005195	BMS1	78	75.385	Ochotona_princeps
ENSGMOG00000000718	bms1	96	64.887	ENSODEG00000005554	BMS1	87	65.538	Octodon_degus
ENSGMOG00000000718	bms1	99	69.869	ENSONIG00000007227	bms1	99	70.504	Oreochromis_niloticus
ENSGMOG00000000718	bms1	90	73.956	ENSOANG00000000662	-	99	64.271	Ornithorhynchus_anatinus
ENSGMOG00000000718	bms1	96	65.968	ENSOCUG00000005354	BMS1	94	63.127	Oryctolagus_cuniculus
ENSGMOG00000000718	bms1	99	71.035	ENSORLG00000014655	bms1	99	71.429	Oryzias_latipes
ENSGMOG00000000718	bms1	97	77.456	ENSORLG00020016246	bms1	99	70.515	Oryzias_latipes_hni
ENSGMOG00000000718	bms1	97	76.849	ENSORLG00015014183	bms1	99	70.941	Oryzias_latipes_hsok
ENSGMOG00000000718	bms1	53	77.134	ENSOMEG00000015042	bms1	99	71.669	Oryzias_melastigma
ENSGMOG00000000718	bms1	96	64.032	ENSOGAG00000006511	BMS1	89	64.469	Otolemur_garnettii
ENSGMOG00000000718	bms1	96	66.451	ENSOARG00000003900	BMS1	89	66.559	Ovis_aries
ENSGMOG00000000718	bms1	99	63.654	ENSPPAG00000027837	BMS1	88	61.850	Pan_paniscus
ENSGMOG00000000718	bms1	95	74.447	ENSPPRG00000001311	BMS1	94	62.808	Panthera_pardus
ENSGMOG00000000718	bms1	92	74.510	ENSPTIG00000009652	BMS1	94	63.188	Panthera_tigris_altaica
ENSGMOG00000000718	bms1	99	63.851	ENSPTRG00000002441	BMS1	88	65.913	Pan_troglodytes
ENSGMOG00000000718	bms1	98	71.429	ENSPKIG00000008165	bms1	89	73.968	Paramormyrops_kingsleyae
ENSGMOG00000000718	bms1	96	65.558	ENSPSIG00000006481	BMS1	89	66.535	Pelodiscus_sinensis
ENSGMOG00000000718	bms1	87	75.443	ENSPEMG00000022467	Bms1	89	63.068	Peromyscus_maniculatus_bairdii
ENSGMOG00000000718	bms1	87	74.939	ENSPCIG00000001339	BMS1	88	69.274	Phascolarctos_cinereus
ENSGMOG00000000718	bms1	86	82.586	ENSPFOG00000015180	bms1	99	69.671	Poecilia_formosa
ENSGMOG00000000718	bms1	97	70.121	ENSPMEG00000023176	bms1	93	70.658	Poecilia_mexicana
ENSGMOG00000000718	bms1	53	75.968	ENSPREG00000002695	bms1	98	70.380	Poecilia_reticulata
ENSGMOG00000000718	bms1	64	73.710	ENSPCAG00000014528	BMS1	75	63.817	Procavia_capensis
ENSGMOG00000000718	bms1	83	75.072	ENSPCOG00000023834	-	86	63.797	Propithecus_coquereli
ENSGMOG00000000718	bms1	99	63.514	ENSPVAG00000000725	BMS1	94	61.401	Pteropus_vampyrus
ENSGMOG00000000718	bms1	99	70.115	ENSPNYG00000018866	bms1	99	70.642	Pundamilia_nyererei
ENSGMOG00000000718	bms1	89	77.518	ENSPNAG00000000676	bms1	91	75.520	Pygocentrus_nattereri
ENSGMOG00000000718	bms1	76	66.923	ENSRNOG00000006576	Bms1	88	67.708	Rattus_norvegicus
ENSGMOG00000000718	bms1	94	70.197	ENSRROG00000040101	BMS1	86	67.140	Rhinopithecus_roxellana
ENSGMOG00000000718	bms1	79	46.926	YPL217C	-	75	52.674	Saccharomyces_cerevisiae
ENSGMOG00000000718	bms1	87	73.775	ENSSBOG00000035778	BMS1	87	65.538	Saimiri_boliviensis_boliviensis
ENSGMOG00000000718	bms1	88	75.184	ENSSHAG00000005062	BMS1	89	64.172	Sarcophilus_harrisii
ENSGMOG00000000718	bms1	96	75.968	ENSSFOG00015022313	bms1	99	67.955	Scleropages_formosus
ENSGMOG00000000718	bms1	53	69.000	ENSSARG00000014407	BMS1	78	69.000	Sorex_araneus
ENSGMOG00000000718	bms1	88	75.306	ENSSPUG00000014454	BMS1	87	65.680	Sphenodon_punctatus
ENSGMOG00000000718	bms1	96	64.384	ENSSSCG00000010198	BMS1	87	65.916	Sus_scrofa
ENSGMOG00000000718	bms1	96	65.916	ENSTGUG00000006302	-	86	65.916	Taeniopygia_guttata
ENSGMOG00000000718	bms1	97	65.739	ENSTRUG00000008028	bms1	98	66.210	Takifugu_rubripes
ENSGMOG00000000718	bms1	99	69.712	ENSTNIG00000006216	bms1	90	69.872	Tetraodon_nigroviridis
ENSGMOG00000000718	bms1	66	68.367	ENSTBEG00000001673	-	62	69.048	Tupaia_belangeri
ENSGMOG00000000718	bms1	99	63.889	ENSTTRG00000007983	BMS1	91	63.748	Tursiops_truncatus
ENSGMOG00000000718	bms1	90	74.510	ENSUAMG00000023996	BMS1	99	62.778	Ursus_americanus
ENSGMOG00000000718	bms1	87	74.510	ENSUMAG00000016523	BMS1	99	62.778	Ursus_maritimus
ENSGMOG00000000718	bms1	75	72.201	ENSVPAG00000007477	BMS1	88	60.518	Vicugna_pacos
ENSGMOG00000000718	bms1	96	65.323	ENSVVUG00000021305	BMS1	91	65.323	Vulpes_vulpes
ENSGMOG00000000718	bms1	98	59.435	ENSXETG00000008158	bms1	99	59.785	Xenopus_tropicalis
ENSGMOG00000000718	bms1	97	68.777	ENSXCOG00000000506	bms1	92	82.005	Xiphophorus_couchianus
ENSGMOG00000000718	bms1	53	75.968	ENSXMAG00000014236	bms1	99	70.908	Xiphophorus_maculatus