EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000000853 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-296d18.1
Alias: -
Full Name: si:ch1073-296d18.1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 13895 bases
Position: chrGeneScaffold_1783:87475-101369
Accession: ZDB-GENE-120215-181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000000903	PARP	PF00644.20	9.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000000938	-	2862	-	ENSGMOP00000000903	953 (aa)	-	UPI00023EF76B

Gene Model

Click here to download ENSGMOG00000000853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000000853's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000000853	si:ch1073-296d18.1	80	33.043	ENSG00000178685	PARP10	90	44.211	Homo_sapiens
ENSGMOG00000000853	si:ch1073-296d18.1	73	63.918	ENSAPOG00000016910	si:ch1073-296d18.1	70	63.918	Acanthochromis_polyacanthus
ENSGMOG00000000853	si:ch1073-296d18.1	61	37.438	ENSAOCG00000007023	-	77	37.438	Amphiprion_ocellaris
ENSGMOG00000000853	si:ch1073-296d18.1	75	62.162	ENSATEG00000011078	si:ch1073-296d18.1	65	62.162	Anabas_testudineus
ENSGMOG00000000853	si:ch1073-296d18.1	60	40.777	ENSANAG00000037218	PARP10	81	33.042	Aotus_nancymaae
ENSGMOG00000000853	si:ch1073-296d18.1	61	45.315	ENSACLG00000012196	-	85	48.748	Astatotilapia_calliptera
ENSGMOG00000000853	si:ch1073-296d18.1	77	64.500	ENSAMXG00000039891	si:ch1073-296d18.1	67	64.500	Astyanax_mexicanus
ENSGMOG00000000853	si:ch1073-296d18.1	68	38.050	ENSBTAG00000009677	PARP10	73	36.267	Bos_taurus
ENSGMOG00000000853	si:ch1073-296d18.1	56	51.309	ENSCJAG00000034531	PARP10	70	37.766	Callithrix_jacchus
ENSGMOG00000000853	si:ch1073-296d18.1	75	37.037	ENSCHIG00000008072	PARP10	84	33.746	Capra_hircus
ENSGMOG00000000853	si:ch1073-296d18.1	68	39.806	ENSTSYG00000005439	PARP10	81	32.411	Carlito_syrichta
ENSGMOG00000000853	si:ch1073-296d18.1	57	40.514	ENSCAPG00000014295	PARP10	79	38.298	Cavia_aperea
ENSGMOG00000000853	si:ch1073-296d18.1	68	40.129	ENSCPOG00000014235	PARP10	69	40.129	Cavia_porcellus
ENSGMOG00000000853	si:ch1073-296d18.1	60	38.782	ENSCCAG00000024610	PARP10	80	32.456	Cebus_capucinus
ENSGMOG00000000853	si:ch1073-296d18.1	80	32.756	ENSCATG00000025822	PARP10	79	32.929	Cercocebus_atys
ENSGMOG00000000853	si:ch1073-296d18.1	61	38.339	ENSCLAG00000013744	PARP10	84	31.474	Chinchilla_lanigera
ENSGMOG00000000853	si:ch1073-296d18.1	80	32.750	ENSCSAG00000008843	PARP10	78	32.925	Chlorocebus_sabaeus
ENSGMOG00000000853	si:ch1073-296d18.1	54	58.937	ENSCPBG00000004075	PARP10	55	58.937	Chrysemys_picta_bellii
ENSGMOG00000000853	si:ch1073-296d18.1	82	32.660	ENSCANG00000043564	PARP10	81	32.828	Colobus_angolensis_palliatus
ENSGMOG00000000853	si:ch1073-296d18.1	67	42.997	ENSCGRG00001012953	Parp10	72	39.892	Cricetulus_griseus_chok1gshd
ENSGMOG00000000853	si:ch1073-296d18.1	67	42.997	ENSCGRG00000003088	Parp10	72	39.892	Cricetulus_griseus_crigri
ENSGMOG00000000853	si:ch1073-296d18.1	61	47.317	ENSCVAG00000014098	-	87	47.317	Cyprinodon_variegatus
ENSGMOG00000000853	si:ch1073-296d18.1	79	67.500	ENSDARG00000087145	si:ch1073-296d18.1	68	67.500	Danio_rerio
ENSGMOG00000000853	si:ch1073-296d18.1	74	38.281	ENSEASG00005009729	PARP10	71	39.276	Equus_asinus_asinus
ENSGMOG00000000853	si:ch1073-296d18.1	69	39.552	ENSEEUG00000005507	PARP10	75	39.552	Erinaceus_europaeus
ENSGMOG00000000853	si:ch1073-296d18.1	86	74.872	ENSELUG00000001455	si:ch1073-296d18.1	78	73.964	Esox_lucius
ENSGMOG00000000853	si:ch1073-296d18.1	67	40.206	ENSFDAG00000015949	PARP10	84	31.076	Fukomys_damarensis
ENSGMOG00000000853	si:ch1073-296d18.1	54	56.995	ENSFHEG00000016698	-	84	56.995	Fundulus_heteroclitus
ENSGMOG00000000853	si:ch1073-296d18.1	100	49.851	ENSGACG00000008798	si:ch1073-296d18.1	99	50.299	Gasterosteus_aculeatus
ENSGMOG00000000853	si:ch1073-296d18.1	68	40.836	ENSGGOG00000001802	PARP10	79	33.043	Gorilla_gorilla
ENSGMOG00000000853	si:ch1073-296d18.1	81	61.340	ENSIPUG00000011187	parp10	72	61.340	Ictalurus_punctatus
ENSGMOG00000000853	si:ch1073-296d18.1	80	32.865	ENSJJAG00000017801	Parp10	86	32.865	Jaculus_jaculus
ENSGMOG00000000853	si:ch1073-296d18.1	91	77.436	ENSKMAG00000002066	si:ch1073-296d18.1	77	77.436	Kryptolebias_marmoratus
ENSGMOG00000000853	si:ch1073-296d18.1	58	69.444	ENSLBEG00000003798	si:ch1073-296d18.1	81	69.444	Labrus_bergylta
ENSGMOG00000000853	si:ch1073-296d18.1	84	41.667	ENSLACG00000008645	PARP10	92	41.667	Latimeria_chalumnae
ENSGMOG00000000853	si:ch1073-296d18.1	86	51.464	ENSLOCG00000008505	si:ch1073-296d18.1	83	51.464	Lepisosteus_oculatus
ENSGMOG00000000853	si:ch1073-296d18.1	80	32.870	ENSMFAG00000044942	PARP10	79	33.043	Macaca_fascicularis
ENSGMOG00000000853	si:ch1073-296d18.1	80	32.870	ENSMMUG00000000449	PARP10	78	33.043	Macaca_mulatta
ENSGMOG00000000853	si:ch1073-296d18.1	80	32.870	ENSMNEG00000034827	PARP10	79	33.043	Macaca_nemestrina
ENSGMOG00000000853	si:ch1073-296d18.1	74	31.274	ENSMLEG00000024662	PARP10	79	31.535	Mandrillus_leucophaeus
ENSGMOG00000000853	si:ch1073-296d18.1	58	73.846	ENSMAMG00000003770	si:ch1073-296d18.1	58	73.846	Mastacembelus_armatus
ENSGMOG00000000853	si:ch1073-296d18.1	82	34.300	ENSMICG00000016227	PARP10	80	34.798	Microcebus_murinus
ENSGMOG00000000853	si:ch1073-296d18.1	80	33.846	ENSMOCG00000000179	Parp10	83	33.846	Microtus_ochrogaster
ENSGMOG00000000853	si:ch1073-296d18.1	82	33.058	ENSMODG00000010393	-	86	32.794	Monodelphis_domestica
ENSGMOG00000000853	si:ch1073-296d18.1	75	38.642	MGP_CAROLIEiJ_G0019914	Parp10	95	62.857	Mus_caroli
ENSGMOG00000000853	si:ch1073-296d18.1	80	34.629	ENSMUSG00000063268	Parp10	95	62.857	Mus_musculus
ENSGMOG00000000853	si:ch1073-296d18.1	69	42.415	MGP_PahariEiJ_G0019924	Parp10	95	61.905	Mus_pahari
ENSGMOG00000000853	si:ch1073-296d18.1	75	38.760	MGP_SPRETEiJ_G0020817	Parp10	95	62.857	Mus_spretus
ENSGMOG00000000853	si:ch1073-296d18.1	67	42.857	ENSNGAG00000023968	Parp10	75	40.470	Nannospalax_galili
ENSGMOG00000000853	si:ch1073-296d18.1	78	71.707	ENSNBRG00000000940	si:ch1073-296d18.1	70	71.707	Neolamprologus_brichardi
ENSGMOG00000000853	si:ch1073-296d18.1	69	40.836	ENSNLEG00000002423	PARP10	79	31.993	Nomascus_leucogenys
ENSGMOG00000000853	si:ch1073-296d18.1	56	52.903	ENSMEUG00000001906	-	57	52.903	Notamacropus_eugenii
ENSGMOG00000000853	si:ch1073-296d18.1	58	42.105	ENSOPRG00000015616	-	63	37.963	Ochotona_princeps
ENSGMOG00000000853	si:ch1073-296d18.1	68	39.016	ENSODEG00000014276	PARP10	70	39.016	Octodon_degus
ENSGMOG00000000853	si:ch1073-296d18.1	91	50.883	ENSONIG00000007669	si:ch1073-296d18.1	99	47.071	Oreochromis_niloticus
ENSGMOG00000000853	si:ch1073-296d18.1	64	45.455	ENSOANG00000013123	-	91	34.564	Ornithorhynchus_anatinus
ENSGMOG00000000853	si:ch1073-296d18.1	78	70.874	ENSORLG00015010006	si:ch1073-296d18.1	76	70.874	Oryzias_latipes_hsok
ENSGMOG00000000853	si:ch1073-296d18.1	69	68.041	ENSOMEG00000011731	si:ch1073-296d18.1	63	68.041	Oryzias_melastigma
ENSGMOG00000000853	si:ch1073-296d18.1	57	54.211	ENSOGAG00000033747	PARP10	54	54.211	Otolemur_garnettii
ENSGMOG00000000853	si:ch1073-296d18.1	61	38.199	ENSOARG00000015581	PARP10	83	33.046	Ovis_aries
ENSGMOG00000000853	si:ch1073-296d18.1	68	40.514	ENSPPAG00000041157	PARP10	79	32.465	Pan_paniscus
ENSGMOG00000000853	si:ch1073-296d18.1	68	40.514	ENSPTRG00000043606	PARP10	64	40.514	Pan_troglodytes
ENSGMOG00000000853	si:ch1073-296d18.1	80	32.756	ENSPANG00000023348	PARP10	79	32.423	Papio_anubis
ENSGMOG00000000853	si:ch1073-296d18.1	85	75.385	ENSPFOG00000013067	si:ch1073-296d18.1	93	55.746	Poecilia_formosa
ENSGMOG00000000853	si:ch1073-296d18.1	78	41.132	ENSPLAG00000022710	-	98	41.132	Poecilia_latipinna
ENSGMOG00000000853	si:ch1073-296d18.1	78	42.044	ENSPMEG00000019504	-	98	42.044	Poecilia_mexicana
ENSGMOG00000000853	si:ch1073-296d18.1	68	40.836	ENSPPYG00000018955	PARP10	83	32.378	Pongo_abelii
ENSGMOG00000000853	si:ch1073-296d18.1	57	39.803	ENSPCAG00000001115	PARP10	74	37.879	Procavia_capensis
ENSGMOG00000000853	si:ch1073-296d18.1	57	54.922	ENSPCOG00000028616	PARP10	74	38.845	Propithecus_coquereli
ENSGMOG00000000853	si:ch1073-296d18.1	67	38.941	ENSPVAG00000006369	PARP10	85	33.215	Pteropus_vampyrus
ENSGMOG00000000853	si:ch1073-296d18.1	61	43.441	ENSPNYG00000005086	-	85	46.912	Pundamilia_nyererei
ENSGMOG00000000853	si:ch1073-296d18.1	86	67.876	ENSPNAG00000024484	si:ch1073-296d18.1	72	67.876	Pygocentrus_nattereri
ENSGMOG00000000853	si:ch1073-296d18.1	69	42.453	ENSRNOG00000004361	Parp10	76	39.286	Rattus_norvegicus
ENSGMOG00000000853	si:ch1073-296d18.1	68	40.777	ENSRBIG00000040506	PARP10	79	32.870	Rhinopithecus_bieti
ENSGMOG00000000853	si:ch1073-296d18.1	80	32.984	ENSRROG00000039086	PARP10	77	33.159	Rhinopithecus_roxellana
ENSGMOG00000000853	si:ch1073-296d18.1	56	49.490	ENSSBOG00000008301	PARP10	82	32.510	Saimiri_boliviensis_boliviensis
ENSGMOG00000000853	si:ch1073-296d18.1	80	32.922	ENSSHAG00000002568	-	87	32.922	Sarcophilus_harrisii
ENSGMOG00000000853	si:ch1073-296d18.1	61	39.052	ENSSLDG00000003545	-	87	39.379	Seriola_lalandi_dorsalis
ENSGMOG00000000853	si:ch1073-296d18.1	59	59.328	ENSSPAG00000005439	-	83	57.500	Stegastes_partitus
ENSGMOG00000000853	si:ch1073-296d18.1	85	52.778	ENSTNIG00000014023	si:ch1073-296d18.1	88	52.778	Tetraodon_nigroviridis
ENSGMOG00000000853	si:ch1073-296d18.1	68	38.170	ENSTTRG00000006314	PARP10	69	38.436	Tursiops_truncatus
ENSGMOG00000000853	si:ch1073-296d18.1	72	51.444	ENSXCOG00000003615	-	100	47.302	Xiphophorus_couchianus
ENSGMOG00000000853	si:ch1073-296d18.1	78	41.410	ENSXMAG00000025112	-	100	51.429	Xiphophorus_maculatus