EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000001062 (Gene tree)
Gene ID: -
Gene Symbol: patz1
Alias: -
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 21239 bases
Position: chrGeneScaffold_345:111875-133113
Accession: ZDB-GENE-111223-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000001110	zf-C2H2	PF00096.26	1e-24	1	3
ENSGMOP00000001110	zf-C2H2	PF00096.26	1e-24	2	3
ENSGMOP00000001110	zf-C2H2	PF00096.26	1e-24	3	3
ENSGMOP00000001110	zf-met	PF12874.7	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000001148	-	2028	-	ENSGMOP00000001110	675 (aa)	-	UPI00023EF8BA

Gene Model

Click here to download ENSGMOG00000001062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000001062's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000001062	patz1	55	37.576	ENSGMOG00000020149	si:dkeyp-113d7.1	100	37.576
ENSGMOG00000001062	patz1	59	45.833	ENSGMOG00000018506	-	99	45.833
ENSGMOG00000001062	patz1	52	32.323	ENSGMOG00000011705	hic2	54	32.323
ENSGMOG00000001062	patz1	56	33.990	ENSGMOG00000012038	prdm5	96	30.588
ENSGMOG00000001062	patz1	54	44.444	ENSGMOG00000013899	bcl6b	54	44.444
ENSGMOG00000001062	patz1	59	31.868	ENSGMOG00000009187	ZNF626	73	31.868
ENSGMOG00000001062	patz1	55	32.365	ENSGMOG00000003238	-	99	35.616
ENSGMOG00000001062	patz1	54	32.510	ENSGMOG00000004315	-	94	32.530
ENSGMOG00000001062	patz1	55	31.056	ENSGMOG00000017526	-	95	30.124
ENSGMOG00000001062	patz1	52	32.174	ENSGMOG00000012795	zbtb16a	52	32.174
ENSGMOG00000001062	patz1	56	35.780	ENSGMOG00000006668	znf236	61	35.870
ENSGMOG00000001062	patz1	60	31.227	ENSGMOG00000007875	ZNF319	91	31.227
ENSGMOG00000001062	patz1	59	30.894	ENSGMOG00000004063	ZNF628	99	30.894
ENSGMOG00000001062	patz1	76	33.043	ENSGMOG00000005711	-	57	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000001062	patz1	98	54.848	ENSG00000100105	PATZ1	98	55.091	Homo_sapiens
ENSGMOG00000001062	patz1	100	69.900	ENSAPOG00000018447	patz1	100	69.472	Acanthochromis_polyacanthus
ENSGMOG00000001062	patz1	98	54.709	ENSAMEG00000007074	PATZ1	98	55.230	Ailuropoda_melanoleuca
ENSGMOG00000001062	patz1	100	68.124	ENSACIG00000016779	patz1	100	67.842	Amphilophus_citrinellus
ENSGMOG00000001062	patz1	100	71.733	ENSAPEG00000013354	patz1	100	71.449	Amphiprion_percula
ENSGMOG00000001062	patz1	99	74.317	ENSATEG00000011260	patz1	100	67.133	Anabas_testudineus
ENSGMOG00000001062	patz1	87	54.886	ENSAPLG00000003934	PATZ1	98	54.723	Anas_platyrhynchos
ENSGMOG00000001062	patz1	98	54.848	ENSANAG00000029603	PATZ1	98	55.091	Aotus_nancymaae
ENSGMOG00000001062	patz1	99	56.630	ENSAMXG00000002273	patz1	91	65.138	Astyanax_mexicanus
ENSGMOG00000001062	patz1	100	54.434	ENSBTAG00000005478	PATZ1	98	55.230	Bos_taurus
ENSGMOG00000001062	patz1	98	54.848	ENSCJAG00000010978	PATZ1	98	55.091	Callithrix_jacchus
ENSGMOG00000001062	patz1	98	54.848	ENSCAFG00000013087	PATZ1	98	55.230	Canis_familiaris
ENSGMOG00000001062	patz1	100	54.434	ENSCHIG00000020203	PATZ1	98	55.230	Capra_hircus
ENSGMOG00000001062	patz1	98	54.848	ENSTSYG00000033183	PATZ1	98	55.230	Carlito_syrichta
ENSGMOG00000001062	patz1	98	54.848	ENSCCAG00000028772	PATZ1	98	55.091	Cebus_capucinus
ENSGMOG00000001062	patz1	98	54.848	ENSCATG00000006101	PATZ1	98	54.951	Cercocebus_atys
ENSGMOG00000001062	patz1	98	54.683	ENSCPBG00000011277	PATZ1	98	55.076	Chrysemys_picta_bellii
ENSGMOG00000001062	patz1	98	54.848	ENSCANG00000024972	PATZ1	98	54.951	Colobus_angolensis_palliatus
ENSGMOG00000001062	patz1	100	52.524	ENSCGRG00001004071	Patz1	98	53.436	Cricetulus_griseus_chok1gshd
ENSGMOG00000001062	patz1	93	52.395	ENSCGRG00000004814	Patz1	98	53.363	Cricetulus_griseus_crigri
ENSGMOG00000001062	patz1	100	66.337	ENSCSEG00000001385	patz1	100	66.479	Cynoglossus_semilaevis
ENSGMOG00000001062	patz1	100	67.376	ENSCVAG00000007684	patz1	100	67.710	Cyprinodon_variegatus
ENSGMOG00000001062	patz1	99	60.234	ENSDARG00000076584	patz1	99	59.795	Danio_rerio
ENSGMOG00000001062	patz1	92	54.021	ENSDNOG00000003183	PATZ1	100	54.587	Dasypus_novemcinctus
ENSGMOG00000001062	patz1	98	54.848	ENSDORG00000023834	Patz1	98	55.230	Dipodomys_ordii
ENSGMOG00000001062	patz1	98	54.848	ENSECAG00000025030	PATZ1	98	55.230	Equus_caballus
ENSGMOG00000001062	patz1	100	61.367	ENSELUG00000002333	patz1	100	60.948	Esox_lucius
ENSGMOG00000001062	patz1	98	54.848	ENSFCAG00000030253	PATZ1	98	55.230	Felis_catus
ENSGMOG00000001062	patz1	88	55.000	ENSFALG00000007450	PATZ1	98	54.839	Ficedula_albicollis
ENSGMOG00000001062	patz1	97	51.408	ENSFDAG00000005614	PATZ1	98	52.224	Fukomys_damarensis
ENSGMOG00000001062	patz1	100	66.000	ENSFHEG00000014755	patz1	100	65.571	Fundulus_heteroclitus
ENSGMOG00000001062	patz1	98	54.759	ENSGALG00000006934	PATZ1	98	54.759	Gallus_gallus
ENSGMOG00000001062	patz1	100	67.954	ENSGAFG00000010053	patz1	100	67.525	Gambusia_affinis
ENSGMOG00000001062	patz1	87	54.839	ENSGAGG00000003214	PATZ1	98	54.976	Gopherus_agassizii
ENSGMOG00000001062	patz1	98	54.848	ENSGGOG00000017171	PATZ1	98	55.091	Gorilla_gorilla
ENSGMOG00000001062	patz1	100	66.715	ENSHCOG00000017644	patz1	99	63.221	Hippocampus_comes
ENSGMOG00000001062	patz1	99	58.368	ENSIPUG00000017653	patz1	98	58.714	Ictalurus_punctatus
ENSGMOG00000001062	patz1	98	54.848	ENSSTOG00000020707	PATZ1	98	55.091	Ictidomys_tridecemlineatus
ENSGMOG00000001062	patz1	100	54.396	ENSJJAG00000015259	Patz1	100	54.772	Jaculus_jaculus
ENSGMOG00000001062	patz1	100	66.620	ENSKMAG00000008157	patz1	100	66.949	Kryptolebias_marmoratus
ENSGMOG00000001062	patz1	98	55.853	ENSLAFG00000002317	PATZ1	98	56.011	Loxodonta_africana
ENSGMOG00000001062	patz1	98	54.848	ENSMFAG00000040968	PATZ1	98	54.951	Macaca_fascicularis
ENSGMOG00000001062	patz1	98	54.848	ENSMNEG00000037588	PATZ1	98	54.951	Macaca_nemestrina
ENSGMOG00000001062	patz1	98	54.848	ENSMLEG00000030938	PATZ1	98	54.951	Mandrillus_leucophaeus
ENSGMOG00000001062	patz1	100	71.549	ENSMAMG00000023652	patz1	100	71.268	Mastacembelus_armatus
ENSGMOG00000001062	patz1	87	52.033	ENSMGAG00000008439	PATZ1	98	51.870	Meleagris_gallopavo
ENSGMOG00000001062	patz1	98	54.571	ENSMAUG00000004129	Patz1	98	54.979	Mesocricetus_auratus
ENSGMOG00000001062	patz1	100	54.434	ENSMICG00000005430	PATZ1	98	55.230	Microcebus_murinus
ENSGMOG00000001062	patz1	98	54.571	ENSMOCG00000014488	Patz1	98	54.979	Microtus_ochrogaster
ENSGMOG00000001062	patz1	77	66.298	ENSMMOG00000021679	patz1	91	66.883	Mola_mola
ENSGMOG00000001062	patz1	100	69.231	ENSMALG00000021172	patz1	100	68.946	Monopterus_albus
ENSGMOG00000001062	patz1	98	54.709	MGP_CAROLIEiJ_G0016007	Patz1	98	54.979	Mus_caroli
ENSGMOG00000001062	patz1	98	54.709	ENSMUSG00000020453	Patz1	98	54.979	Mus_musculus
ENSGMOG00000001062	patz1	98	54.709	MGP_PahariEiJ_G0016884	Patz1	98	54.979	Mus_pahari
ENSGMOG00000001062	patz1	98	54.709	MGP_SPRETEiJ_G0016846	Patz1	98	54.979	Mus_spretus
ENSGMOG00000001062	patz1	98	54.709	ENSMLUG00000009942	PATZ1	98	54.951	Myotis_lucifugus
ENSGMOG00000001062	patz1	98	54.709	ENSNGAG00000010268	Patz1	98	54.951	Nannospalax_galili
ENSGMOG00000001062	patz1	100	69.405	ENSNBRG00000016032	patz1	100	69.122	Neolamprologus_brichardi
ENSGMOG00000001062	patz1	66	56.427	ENSMEUG00000016293	PATZ1	91	56.608	Notamacropus_eugenii
ENSGMOG00000001062	patz1	98	54.848	ENSODEG00000003589	PATZ1	98	55.230	Octodon_degus
ENSGMOG00000001062	patz1	100	68.608	ENSONIG00000004248	patz1	100	68.182	Oreochromis_niloticus
ENSGMOG00000001062	patz1	98	56.180	ENSOANG00000014654	PATZ1	98	55.899	Ornithorhynchus_anatinus
ENSGMOG00000001062	patz1	100	72.379	ENSORLG00020010937	patz1	100	72.379	Oryzias_latipes_hni
ENSGMOG00000001062	patz1	100	69.155	ENSORLG00015007396	patz1	100	69.014	Oryzias_latipes_hsok
ENSGMOG00000001062	patz1	100	66.714	ENSOMEG00000006636	patz1	100	66.571	Oryzias_melastigma
ENSGMOG00000001062	patz1	98	54.848	ENSOGAG00000027905	PATZ1	98	55.230	Otolemur_garnettii
ENSGMOG00000001062	patz1	98	54.848	ENSPPAG00000033227	PATZ1	98	55.091	Pan_paniscus
ENSGMOG00000001062	patz1	98	54.848	ENSPPRG00000001573	PATZ1	98	55.230	Panthera_pardus
ENSGMOG00000001062	patz1	87	54.341	ENSPTIG00000007937	PATZ1	89	54.281	Panthera_tigris_altaica
ENSGMOG00000001062	patz1	98	54.848	ENSPTRG00000014268	PATZ1	98	55.091	Pan_troglodytes
ENSGMOG00000001062	patz1	98	54.848	ENSPANG00000006821	PATZ1	98	54.951	Papio_anubis
ENSGMOG00000001062	patz1	100	67.736	ENSPKIG00000019584	patz1	100	66.094	Paramormyrops_kingsleyae
ENSGMOG00000001062	patz1	56	56.923	ENSPSIG00000016553	-	85	56.923	Pelodiscus_sinensis
ENSGMOG00000001062	patz1	61	59.472	ENSPSIG00000011562	-	97	59.233	Pelodiscus_sinensis
ENSGMOG00000001062	patz1	100	66.909	ENSPMGG00000010196	patz1	100	66.715	Periophthalmus_magnuspinnatus
ENSGMOG00000001062	patz1	98	54.785	ENSPEMG00000005321	Patz1	98	55.028	Peromyscus_maniculatus_bairdii
ENSGMOG00000001062	patz1	100	67.714	ENSPLAG00000010425	patz1	100	67.286	Poecilia_latipinna
ENSGMOG00000001062	patz1	100	67.811	ENSPMEG00000000255	patz1	100	67.382	Poecilia_mexicana
ENSGMOG00000001062	patz1	100	70.213	ENSPREG00000002440	patz1	100	70.100	Poecilia_reticulata
ENSGMOG00000001062	patz1	98	54.848	ENSPPYG00000011732	PATZ1	98	55.091	Pongo_abelii
ENSGMOG00000001062	patz1	100	54.434	ENSPCOG00000019729	PATZ1	98	55.230	Propithecus_coquereli
ENSGMOG00000001062	patz1	98	54.848	ENSPVAG00000001749	PATZ1	98	55.230	Pteropus_vampyrus
ENSGMOG00000001062	patz1	100	70.255	ENSPNYG00000013542	patz1	100	69.972	Pundamilia_nyererei
ENSGMOG00000001062	patz1	88	58.974	ENSPNAG00000017222	patz1	100	58.814	Pygocentrus_nattereri
ENSGMOG00000001062	patz1	98	54.848	ENSRBIG00000044231	PATZ1	98	54.951	Rhinopithecus_bieti
ENSGMOG00000001062	patz1	98	54.848	ENSRROG00000037155	PATZ1	98	54.951	Rhinopithecus_roxellana
ENSGMOG00000001062	patz1	98	54.848	ENSSBOG00000003894	PATZ1	98	55.091	Saimiri_boliviensis_boliviensis
ENSGMOG00000001062	patz1	73	86.957	ENSSFOG00015013244	patz1	78	86.957	Scleropages_formosus
ENSGMOG00000001062	patz1	97	55.367	ENSSPUG00000015298	PATZ1	95	55.777	Sphenodon_punctatus
ENSGMOG00000001062	patz1	87	53.971	ENSSSCG00000010027	PATZ1	98	54.146	Sus_scrofa
ENSGMOG00000001062	patz1	100	70.822	ENSTRUG00000015366	patz1	100	70.739	Takifugu_rubripes
ENSGMOG00000001062	patz1	98	54.709	ENSTTRG00000010279	PATZ1	98	55.091	Tursiops_truncatus
ENSGMOG00000001062	patz1	98	52.580	ENSUAMG00000015014	PATZ1	98	52.778	Ursus_americanus
ENSGMOG00000001062	patz1	100	54.843	ENSXETG00000004190	patz1	100	54.636	Xenopus_tropicalis
ENSGMOG00000001062	patz1	100	67.954	ENSXMAG00000015531	patz1	100	67.525	Xiphophorus_maculatus