EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000001231 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 4261 bases
Position: chrGeneScaffold_3548:146434-150694
Accession: ZDB-GENE-070112-1352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000001275	R3H	PF01424.22	9.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000001321	-	723	-	ENSGMOP00000001275	240 (aa)	-	UPI00023EF90E

Gene Model

Click here to download ENSGMOG00000001231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000001231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000001231	r3hdm4	97	52.521	ENSG00000198858	R3HDM4	94	50.855	Homo_sapiens
ENSGMOG00000001231	r3hdm4	97	53.138	ENSAMEG00000003001	R3HDM4	97	52.521	Ailuropoda_melanoleuca
ENSGMOG00000001231	r3hdm4	100	70.248	ENSACIG00000004672	r3hdm4	95	70.248	Amphilophus_citrinellus
ENSGMOG00000001231	r3hdm4	98	71.429	ENSATEG00000015913	r3hdm4	94	71.849	Anabas_testudineus
ENSGMOG00000001231	r3hdm4	97	52.720	ENSANAG00000029748	R3HDM4	98	52.101	Aotus_nancymaae
ENSGMOG00000001231	r3hdm4	98	52.400	ENSBTAG00000046406	R3HDM4	91	51.807	Bos_taurus
ENSGMOG00000001231	r3hdm4	98	51.807	ENSCJAG00000020114	R3HDM4	92	51.613	Callithrix_jacchus
ENSGMOG00000001231	r3hdm4	97	53.138	ENSCAFG00000019665	R3HDM4	87	52.521	Canis_familiaris
ENSGMOG00000001231	r3hdm4	97	52.720	ENSCAFG00020016880	R3HDM4	87	52.101	Canis_lupus_dingo
ENSGMOG00000001231	r3hdm4	98	53.200	ENSCHIG00000020110	R3HDM4	91	52.941	Capra_hircus
ENSGMOG00000001231	r3hdm4	97	51.883	ENSCCAG00000019955	R3HDM4	86	51.261	Cebus_capucinus
ENSGMOG00000001231	r3hdm4	98	51.394	ENSCATG00000037269	R3HDM4	93	50.800	Cercocebus_atys
ENSGMOG00000001231	r3hdm4	97	52.101	ENSCLAG00000007094	R3HDM4	97	51.477	Chinchilla_lanigera
ENSGMOG00000001231	r3hdm4	98	52.000	ENSCSAG00000012574	R3HDM4	93	51.406	Chlorocebus_sabaeus
ENSGMOG00000001231	r3hdm4	96	58.723	ENSCPBG00000009805	R3HDM4	89	58.723	Chrysemys_picta_bellii
ENSGMOG00000001231	r3hdm4	97	52.720	ENSCANG00000040439	R3HDM4	83	52.101	Colobus_angolensis_palliatus
ENSGMOG00000001231	r3hdm4	95	53.586	ENSCGRG00001021650	R3hdm4	89	52.766	Cricetulus_griseus_chok1gshd
ENSGMOG00000001231	r3hdm4	95	53.586	ENSCGRG00000013169	R3hdm4	89	52.766	Cricetulus_griseus_crigri
ENSGMOG00000001231	r3hdm4	100	68.050	ENSCSEG00000018211	r3hdm4	95	68.050	Cynoglossus_semilaevis
ENSGMOG00000001231	r3hdm4	100	69.835	ENSCVAG00000017127	r3hdm4	95	69.835	Cyprinodon_variegatus
ENSGMOG00000001231	r3hdm4	95	51.695	ENSDORG00000006605	R3hdm4	96	50.638	Dipodomys_ordii
ENSGMOG00000001231	r3hdm4	97	52.720	ENSEASG00005021556	R3HDM4	86	52.521	Equus_asinus_asinus
ENSGMOG00000001231	r3hdm4	97	53.138	ENSECAG00000000003	R3HDM4	87	52.521	Equus_caballus
ENSGMOG00000001231	r3hdm4	97	53.138	ENSFCAG00000042437	R3HDM4	88	52.521	Felis_catus
ENSGMOG00000001231	r3hdm4	96	60.426	ENSFALG00000013938	R3HDM4	97	60.426	Ficedula_albicollis
ENSGMOG00000001231	r3hdm4	97	51.883	ENSFDAG00000017040	R3HDM4	97	51.883	Fukomys_damarensis
ENSGMOG00000001231	r3hdm4	100	70.661	ENSFHEG00000017636	r3hdm4	95	70.661	Fundulus_heteroclitus
ENSGMOG00000001231	r3hdm4	96	58.650	ENSGALG00000001998	R3HDM4	90	58.650	Gallus_gallus
ENSGMOG00000001231	r3hdm4	100	70.661	ENSGAFG00000004173	r3hdm4	95	70.661	Gambusia_affinis
ENSGMOG00000001231	r3hdm4	95	59.483	ENSGAGG00000019698	R3HDM4	88	59.483	Gopherus_agassizii
ENSGMOG00000001231	r3hdm4	97	53.782	ENSGGOG00000008040	R3HDM4	97	52.743	Gorilla_gorilla
ENSGMOG00000001231	r3hdm4	100	71.488	ENSHBUG00000014810	r3hdm4	95	71.074	Haplochromis_burtoni
ENSGMOG00000001231	r3hdm4	97	51.261	ENSHGLG00000016194	R3HDM4	88	50.633	Heterocephalus_glaber_female
ENSGMOG00000001231	r3hdm4	99	69.583	ENSHCOG00000008422	r3hdm4	93	68.750	Hippocampus_comes
ENSGMOG00000001231	r3hdm4	100	63.525	ENSIPUG00000006716	r3hdm4	94	63.525	Ictalurus_punctatus
ENSGMOG00000001231	r3hdm4	97	50.420	ENSSTOG00000023015	R3HDM4	97	51.055	Ictidomys_tridecemlineatus
ENSGMOG00000001231	r3hdm4	95	53.191	ENSJJAG00000012475	R3hdm4	89	52.991	Jaculus_jaculus
ENSGMOG00000001231	r3hdm4	100	72.314	ENSKMAG00000005853	r3hdm4	95	72.314	Kryptolebias_marmoratus
ENSGMOG00000001231	r3hdm4	100	71.901	ENSLBEG00000000730	r3hdm4	95	71.901	Labrus_bergylta
ENSGMOG00000001231	r3hdm4	97	53.165	ENSLACG00000016445	R3HDM4	91	54.430	Latimeria_chalumnae
ENSGMOG00000001231	r3hdm4	97	64.831	ENSLOCG00000002423	r3hdm4	91	64.831	Lepisosteus_oculatus
ENSGMOG00000001231	r3hdm4	95	54.237	ENSLAFG00000017796	R3HDM4	90	53.191	Loxodonta_africana
ENSGMOG00000001231	r3hdm4	98	52.000	ENSMFAG00000044131	R3HDM4	93	51.406	Macaca_fascicularis
ENSGMOG00000001231	r3hdm4	91	53.333	ENSMMUG00000009682	R3HDM4	90	52.679	Macaca_mulatta
ENSGMOG00000001231	r3hdm4	97	52.720	ENSMNEG00000044115	R3HDM4	96	52.101	Macaca_nemestrina
ENSGMOG00000001231	r3hdm4	96	52.033	ENSMLEG00000035693	R3HDM4	87	51.915	Mandrillus_leucophaeus
ENSGMOG00000001231	r3hdm4	86	70.813	ENSMAMG00000005652	r3hdm4	86	70.813	Mastacembelus_armatus
ENSGMOG00000001231	r3hdm4	95	53.165	ENSMAUG00000010611	R3hdm4	91	52.340	Mesocricetus_auratus
ENSGMOG00000001231	r3hdm4	97	53.361	ENSMICG00000010124	R3HDM4	88	52.321	Microcebus_murinus
ENSGMOG00000001231	r3hdm4	95	52.564	ENSMOCG00000002646	R3hdm4	89	52.361	Microtus_ochrogaster
ENSGMOG00000001231	r3hdm4	100	71.074	ENSMMOG00000008253	r3hdm4	95	71.074	Mola_mola
ENSGMOG00000001231	r3hdm4	94	56.087	ENSMODG00000005698	R3HDM4	99	56.087	Monodelphis_domestica
ENSGMOG00000001231	r3hdm4	100	68.595	ENSMALG00000018856	r3hdm4	94	68.595	Monopterus_albus
ENSGMOG00000001231	r3hdm4	95	53.419	MGP_CAROLIEiJ_G0015551	R3hdm4	89	53.219	Mus_caroli
ENSGMOG00000001231	r3hdm4	95	53.247	ENSMUSG00000035781	R3hdm4	88	53.247	Mus_musculus
ENSGMOG00000001231	r3hdm4	95	52.564	MGP_PahariEiJ_G0030964	R3hdm4	89	52.361	Mus_pahari
ENSGMOG00000001231	r3hdm4	95	53.419	MGP_SPRETEiJ_G0016369	-	74	53.017	Mus_spretus
ENSGMOG00000001231	r3hdm4	98	53.909	ENSMPUG00000009394	R3HDM4	90	53.306	Mustela_putorius_furo
ENSGMOG00000001231	r3hdm4	100	71.901	ENSNBRG00000004438	r3hdm4	95	71.488	Neolamprologus_brichardi
ENSGMOG00000001231	r3hdm4	90	52.632	ENSNLEG00000001022	R3HDM4	98	51.542	Nomascus_leucogenys
ENSGMOG00000001231	r3hdm4	96	55.932	ENSMEUG00000011020	R3HDM4	99	55.932	Notamacropus_eugenii
ENSGMOG00000001231	r3hdm4	97	52.521	ENSODEG00000011745	R3HDM4	88	51.899	Octodon_degus
ENSGMOG00000001231	r3hdm4	100	71.488	ENSONIG00000012675	r3hdm4	87	71.074	Oreochromis_niloticus
ENSGMOG00000001231	r3hdm4	100	71.074	ENSOMEG00000003005	r3hdm4	95	71.074	Oryzias_melastigma
ENSGMOG00000001231	r3hdm4	95	52.340	ENSOGAG00000025656	R3HDM4	89	51.282	Otolemur_garnettii
ENSGMOG00000001231	r3hdm4	97	53.556	ENSOARG00000009945	R3HDM4	97	52.941	Ovis_aries
ENSGMOG00000001231	r3hdm4	99	51.172	ENSPPAG00000042371	R3HDM4	97	52.101	Pan_paniscus
ENSGMOG00000001231	r3hdm4	98	52.000	ENSPANG00000015203	R3HDM4	93	51.406	Papio_anubis
ENSGMOG00000001231	r3hdm4	94	64.602	ENSPKIG00000007421	r3hdm4	91	63.983	Paramormyrops_kingsleyae
ENSGMOG00000001231	r3hdm4	99	65.417	ENSPMGG00000020467	r3hdm4	93	65.417	Periophthalmus_magnuspinnatus
ENSGMOG00000001231	r3hdm4	95	53.219	ENSPEMG00000008365	Tmem259	96	52.361	Peromyscus_maniculatus_bairdii
ENSGMOG00000001231	r3hdm4	100	70.661	ENSPFOG00000003199	r3hdm4	95	70.661	Poecilia_formosa
ENSGMOG00000001231	r3hdm4	100	70.661	ENSPMEG00000014183	r3hdm4	95	70.661	Poecilia_mexicana
ENSGMOG00000001231	r3hdm4	100	71.074	ENSPREG00000010709	r3hdm4	95	71.074	Poecilia_reticulata
ENSGMOG00000001231	r3hdm4	97	52.743	ENSPPYG00000009297	R3HDM4	88	52.743	Pongo_abelii
ENSGMOG00000001231	r3hdm4	61	53.642	ENSPCAG00000010997	R3HDM4	55	53.642	Procavia_capensis
ENSGMOG00000001231	r3hdm4	98	52.209	ENSPCOG00000016785	R3HDM4	92	51.210	Propithecus_coquereli
ENSGMOG00000001231	r3hdm4	100	71.488	ENSPNYG00000017489	r3hdm4	95	71.074	Pundamilia_nyererei
ENSGMOG00000001231	r3hdm4	95	53.419	ENSRNOG00000011489	R3hdm4	89	52.790	Rattus_norvegicus
ENSGMOG00000001231	r3hdm4	97	52.720	ENSRROG00000028842	R3HDM4	88	52.101	Rhinopithecus_roxellana
ENSGMOG00000001231	r3hdm4	97	51.200	ENSSBOG00000019298	R3HDM4	73	51.406	Saimiri_boliviensis_boliviensis
ENSGMOG00000001231	r3hdm4	59	60.274	ENSSHAG00000003036	-	100	60.274	Sarcophilus_harrisii
ENSGMOG00000001231	r3hdm4	100	66.390	ENSSFOG00015020574	r3hdm4	89	66.390	Scleropages_formosus
ENSGMOG00000001231	r3hdm4	100	70.248	ENSSMAG00000021090	r3hdm4	70	70.248	Scophthalmus_maximus
ENSGMOG00000001231	r3hdm4	100	71.488	ENSSDUG00000008488	r3hdm4	95	71.488	Seriola_dumerili
ENSGMOG00000001231	r3hdm4	100	71.488	ENSSLDG00000025328	r3hdm4	95	71.488	Seriola_lalandi_dorsalis
ENSGMOG00000001231	r3hdm4	94	57.391	ENSSPUG00000005434	R3HDM4	90	57.391	Sphenodon_punctatus
ENSGMOG00000001231	r3hdm4	99	66.805	ENSSPAG00000002562	r3hdm4	94	66.805	Stegastes_partitus
ENSGMOG00000001231	r3hdm4	98	52.800	ENSSSCG00000013419	R3HDM4	91	51.807	Sus_scrofa
ENSGMOG00000001231	r3hdm4	81	52.970	ENSTGUG00000000663	R3HDM4	97	54.455	Taeniopygia_guttata
ENSGMOG00000001231	r3hdm4	97	54.701	ENSTTRG00000001470	R3HDM4	97	53.648	Tursiops_truncatus
ENSGMOG00000001231	r3hdm4	97	48.101	ENSUAMG00000005751	R3HDM4	100	53.125	Ursus_americanus
ENSGMOG00000001231	r3hdm4	97	53.138	ENSVVUG00000022685	R3HDM4	87	52.521	Vulpes_vulpes
ENSGMOG00000001231	r3hdm4	95	47.845	ENSXETG00000033624	R3HDM4	90	47.845	Xenopus_tropicalis
ENSGMOG00000001231	r3hdm4	100	69.547	ENSXCOG00000005127	r3hdm4	95	69.547	Xiphophorus_couchianus
ENSGMOG00000001231	r3hdm4	100	69.835	ENSXMAG00000022875	r3hdm4	95	69.835	Xiphophorus_maculatus