EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000001290 (Gene tree)
Gene ID: -
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TAR (HIV) RNA binding protein 2
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 2759 bases
Position: chrGeneScaffold_259:59305-62063
Accession: ZDB-GENE-030131-8085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000001336	dsrm	PF00035.26	8.4e-36	1	2
ENSGMOP00000001336	dsrm	PF00035.26	8.4e-36	2	2
ENSGMOP00000001336	DND1_DSRM	PF14709.7	5.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000001385	-	1044	-	ENSGMOP00000001336	347 (aa)	-	UPI00023EF955

Gene Model

Click here to download ENSGMOG00000001290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000001290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000001290	tarbp2	91	37.342	ENSGMOG00000004021	prkra	95	36.164

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000001290	tarbp2	100	65.135	ENSG00000139546	TARBP2	100	66.189	Homo_sapiens
ENSGMOG00000001290	tarbp2	100	87.320	ENSAPOG00000019892	tarbp2	100	87.320	Acanthochromis_polyacanthus
ENSGMOG00000001290	tarbp2	100	65.946	ENSAMEG00000012601	TARBP2	100	65.405	Ailuropoda_melanoleuca
ENSGMOG00000001290	tarbp2	100	85.879	ENSACIG00000016780	tarbp2	100	85.879	Amphilophus_citrinellus
ENSGMOG00000001290	tarbp2	100	87.320	ENSAOCG00000005201	tarbp2	100	87.320	Amphiprion_ocellaris
ENSGMOG00000001290	tarbp2	100	87.320	ENSAPEG00000008376	tarbp2	100	87.320	Amphiprion_percula
ENSGMOG00000001290	tarbp2	100	86.167	ENSATEG00000025012	tarbp2	100	86.167	Anabas_testudineus
ENSGMOG00000001290	tarbp2	100	66.484	ENSACAG00000001100	TARBP2	100	66.484	Anolis_carolinensis
ENSGMOG00000001290	tarbp2	100	64.191	ENSANAG00000034453	TARBP2	94	77.027	Aotus_nancymaae
ENSGMOG00000001290	tarbp2	95	86.970	ENSACLG00000018569	tarbp2	95	86.970	Astatotilapia_calliptera
ENSGMOG00000001290	tarbp2	100	80.460	ENSAMXG00000016665	tarbp2	100	80.460	Astyanax_mexicanus
ENSGMOG00000001290	tarbp2	100	64.721	ENSBTAG00000000435	TARBP2	100	65.405	Bos_taurus
ENSGMOG00000001290	tarbp2	100	63.926	ENSCJAG00000018668	TARBP2	100	64.595	Callithrix_jacchus
ENSGMOG00000001290	tarbp2	100	68.091	ENSCAFG00000006874	TARBP2	100	68.091	Canis_familiaris
ENSGMOG00000001290	tarbp2	100	65.676	ENSCAFG00020020735	TARBP2	100	66.762	Canis_lupus_dingo
ENSGMOG00000001290	tarbp2	100	64.362	ENSCHIG00000026017	TARBP2	100	64.267	Capra_hircus
ENSGMOG00000001290	tarbp2	100	65.946	ENSTSYG00000035683	TARBP2	94	77.027	Carlito_syrichta
ENSGMOG00000001290	tarbp2	65	68.282	ENSCAPG00000008981	TARBP2	100	68.282	Cavia_aperea
ENSGMOG00000001290	tarbp2	100	65.217	ENSCPOG00000001009	TARBP2	100	65.217	Cavia_porcellus
ENSGMOG00000001290	tarbp2	100	63.926	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSGMOG00000001290	tarbp2	100	64.865	ENSCATG00000026344	TARBP2	94	77.027	Cercocebus_atys
ENSGMOG00000001290	tarbp2	100	64.946	ENSCLAG00000009175	TARBP2	100	64.946	Chinchilla_lanigera
ENSGMOG00000001290	tarbp2	100	64.865	ENSCSAG00000005479	TARBP2	100	64.420	Chlorocebus_sabaeus
ENSGMOG00000001290	tarbp2	100	67.218	ENSCPBG00000000654	TARBP2	100	69.006	Chrysemys_picta_bellii
ENSGMOG00000001290	tarbp2	100	65.135	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSGMOG00000001290	tarbp2	100	64.578	ENSCGRG00001011856	TARBP2	100	64.578	Cricetulus_griseus_chok1gshd
ENSGMOG00000001290	tarbp2	100	64.578	ENSCGRG00000009088	TARBP2	100	66.939	Cricetulus_griseus_crigri
ENSGMOG00000001290	tarbp2	100	85.879	ENSCSEG00000010631	tarbp2	100	85.879	Cynoglossus_semilaevis
ENSGMOG00000001290	tarbp2	100	85.014	ENSCVAG00000009832	tarbp2	100	85.014	Cyprinodon_variegatus
ENSGMOG00000001290	tarbp2	100	79.714	ENSDARG00000070471	tarbp2	100	79.714	Danio_rerio
ENSGMOG00000001290	tarbp2	100	65.405	ENSDNOG00000002144	TARBP2	100	64.865	Dasypus_novemcinctus
ENSGMOG00000001290	tarbp2	64	69.196	ENSDORG00000001390	Tarbp2	91	69.196	Dipodomys_ordii
ENSGMOG00000001290	tarbp2	86	81.633	ENSETEG00000002458	TARBP2	77	78.481	Echinops_telfairi
ENSGMOG00000001290	tarbp2	95	58.055	ENSEBUG00000002377	tarbp2	96	59.692	Eptatretus_burgeri
ENSGMOG00000001290	tarbp2	100	65.946	ENSEASG00005010030	TARBP2	100	65.405	Equus_asinus_asinus
ENSGMOG00000001290	tarbp2	100	67.042	ENSECAG00000011695	TARBP2	94	77.027	Equus_caballus
ENSGMOG00000001290	tarbp2	84	60.790	ENSEEUG00000001128	-	80	77.215	Erinaceus_europaeus
ENSGMOG00000001290	tarbp2	100	83.714	ENSELUG00000010642	tarbp2	100	84.900	Esox_lucius
ENSGMOG00000001290	tarbp2	100	66.216	ENSFCAG00000007757	TARBP2	100	65.676	Felis_catus
ENSGMOG00000001290	tarbp2	100	64.516	ENSFDAG00000011932	TARBP2	100	67.480	Fukomys_damarensis
ENSGMOG00000001290	tarbp2	94	85.890	ENSFHEG00000016118	tarbp2	100	85.890	Fundulus_heteroclitus
ENSGMOG00000001290	tarbp2	65	70.089	ENSGALG00000038939	-	84	70.089	Gallus_gallus
ENSGMOG00000001290	tarbp2	100	84.438	ENSGAFG00000013341	tarbp2	100	84.438	Gambusia_affinis
ENSGMOG00000001290	tarbp2	100	84.225	ENSGACG00000006645	tarbp2	100	83.944	Gasterosteus_aculeatus
ENSGMOG00000001290	tarbp2	100	67.493	ENSGAGG00000021169	TARBP2	100	67.493	Gopherus_agassizii
ENSGMOG00000001290	tarbp2	100	64.865	ENSGGOG00000012637	TARBP2	94	75.676	Gorilla_gorilla
ENSGMOG00000001290	tarbp2	100	86.455	ENSHBUG00000018639	tarbp2	100	86.455	Haplochromis_burtoni
ENSGMOG00000001290	tarbp2	100	65.217	ENSHGLG00000001284	TARBP2	100	65.217	Heterocephalus_glaber_female
ENSGMOG00000001290	tarbp2	100	65.217	ENSHGLG00100011274	TARBP2	100	65.217	Heterocephalus_glaber_male
ENSGMOG00000001290	tarbp2	100	82.709	ENSHCOG00000001027	tarbp2	100	82.709	Hippocampus_comes
ENSGMOG00000001290	tarbp2	100	80.627	ENSIPUG00000023701	tarbp2	100	80.627	Ictalurus_punctatus
ENSGMOG00000001290	tarbp2	100	64.946	ENSSTOG00000003678	TARBP2	100	69.106	Ictidomys_tridecemlineatus
ENSGMOG00000001290	tarbp2	100	86.167	ENSKMAG00000012142	tarbp2	100	86.167	Kryptolebias_marmoratus
ENSGMOG00000001290	tarbp2	100	83.427	ENSLBEG00000015027	tarbp2	100	83.427	Labrus_bergylta
ENSGMOG00000001290	tarbp2	99	60.465	ENSLACG00000007087	TARBP2	99	59.884	Latimeria_chalumnae
ENSGMOG00000001290	tarbp2	100	79.261	ENSLOCG00000005711	tarbp2	100	79.261	Lepisosteus_oculatus
ENSGMOG00000001290	tarbp2	72	63.004	ENSLAFG00000002620	TARBP2	95	62.593	Loxodonta_africana
ENSGMOG00000001290	tarbp2	100	64.865	ENSMFAG00000013567	TARBP2	94	77.027	Macaca_fascicularis
ENSGMOG00000001290	tarbp2	100	65.135	ENSMMUG00000018492	TARBP2	100	64.595	Macaca_mulatta
ENSGMOG00000001290	tarbp2	100	64.865	ENSMNEG00000036477	TARBP2	94	77.027	Macaca_nemestrina
ENSGMOG00000001290	tarbp2	100	64.865	ENSMLEG00000029583	TARBP2	94	77.027	Mandrillus_leucophaeus
ENSGMOG00000001290	tarbp2	95	84.802	ENSMAMG00000010272	tarbp2	97	81.395	Mastacembelus_armatus
ENSGMOG00000001290	tarbp2	100	86.455	ENSMZEG00005006895	tarbp2	100	86.455	Maylandia_zebra
ENSGMOG00000001290	tarbp2	100	64.305	ENSMAUG00000019805	Tarbp2	100	64.305	Mesocricetus_auratus
ENSGMOG00000001290	tarbp2	94	67.335	ENSMICG00000027441	TARBP2	94	77.027	Microcebus_murinus
ENSGMOG00000001290	tarbp2	100	65.395	ENSMOCG00000003691	Tarbp2	100	64.850	Microtus_ochrogaster
ENSGMOG00000001290	tarbp2	94	83.988	ENSMMOG00000010374	tarbp2	100	83.988	Mola_mola
ENSGMOG00000001290	tarbp2	100	86.455	ENSMALG00000009773	tarbp2	100	86.455	Monopterus_albus
ENSGMOG00000001290	tarbp2	100	64.033	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSGMOG00000001290	tarbp2	100	64.033	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSGMOG00000001290	tarbp2	100	63.760	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSGMOG00000001290	tarbp2	100	64.033	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSGMOG00000001290	tarbp2	100	64.960	ENSMPUG00000005944	TARBP2	100	65.041	Mustela_putorius_furo
ENSGMOG00000001290	tarbp2	100	66.216	ENSMLUG00000010035	TARBP2	100	65.676	Myotis_lucifugus
ENSGMOG00000001290	tarbp2	100	65.135	ENSNLEG00000017690	TARBP2	94	77.027	Nomascus_leucogenys
ENSGMOG00000001290	tarbp2	100	68.571	ENSMEUG00000001916	TARBP2	100	67.908	Notamacropus_eugenii
ENSGMOG00000001290	tarbp2	65	69.869	ENSOPRG00000011397	TARBP2	100	69.869	Ochotona_princeps
ENSGMOG00000001290	tarbp2	60	69.912	ENSODEG00000013413	TARBP2	100	69.912	Octodon_degus
ENSGMOG00000001290	tarbp2	95	83.143	ENSONIG00000005115	tarbp2	96	83.143	Oreochromis_niloticus
ENSGMOG00000001290	tarbp2	100	66.938	ENSOCUG00000005700	TARBP2	100	66.396	Oryctolagus_cuniculus
ENSGMOG00000001290	tarbp2	100	85.014	ENSORLG00000005209	tarbp2	100	85.014	Oryzias_latipes
ENSGMOG00000001290	tarbp2	100	85.014	ENSORLG00020017755	tarbp2	100	85.014	Oryzias_latipes_hni
ENSGMOG00000001290	tarbp2	100	85.014	ENSORLG00015013237	tarbp2	100	85.014	Oryzias_latipes_hsok
ENSGMOG00000001290	tarbp2	100	84.726	ENSOMEG00000018860	tarbp2	100	84.726	Oryzias_melastigma
ENSGMOG00000001290	tarbp2	100	63.710	ENSOGAG00000001744	TARBP2	100	64.324	Otolemur_garnettii
ENSGMOG00000001290	tarbp2	100	64.456	ENSOARG00000016437	TARBP2	100	65.135	Ovis_aries
ENSGMOG00000001290	tarbp2	100	65.135	ENSPPAG00000030429	TARBP2	94	77.027	Pan_paniscus
ENSGMOG00000001290	tarbp2	100	66.216	ENSPPRG00000000189	TARBP2	100	65.676	Panthera_pardus
ENSGMOG00000001290	tarbp2	100	66.851	ENSPTIG00000007859	TARBP2	100	66.209	Panthera_tigris_altaica
ENSGMOG00000001290	tarbp2	100	65.135	ENSPTRG00000005020	TARBP2	94	77.027	Pan_troglodytes
ENSGMOG00000001290	tarbp2	100	64.865	ENSPANG00000010689	TARBP2	94	77.027	Papio_anubis
ENSGMOG00000001290	tarbp2	100	75.978	ENSPKIG00000002455	tarbp2	100	75.419	Paramormyrops_kingsleyae
ENSGMOG00000001290	tarbp2	100	85.879	ENSPMGG00000006497	tarbp2	100	85.879	Periophthalmus_magnuspinnatus
ENSGMOG00000001290	tarbp2	100	64.578	ENSPEMG00000014285	Tarbp2	100	63.760	Peromyscus_maniculatus_bairdii
ENSGMOG00000001290	tarbp2	93	62.037	ENSPMAG00000000105	tarbp2	99	60.185	Petromyzon_marinus
ENSGMOG00000001290	tarbp2	100	68.857	ENSPCIG00000006672	TARBP2	92	68.195	Phascolarctos_cinereus
ENSGMOG00000001290	tarbp2	100	85.014	ENSPFOG00000007586	tarbp2	100	85.014	Poecilia_formosa
ENSGMOG00000001290	tarbp2	100	84.726	ENSPLAG00000017659	tarbp2	100	84.726	Poecilia_latipinna
ENSGMOG00000001290	tarbp2	100	85.014	ENSPMEG00000007775	tarbp2	100	85.014	Poecilia_mexicana
ENSGMOG00000001290	tarbp2	100	84.438	ENSPREG00000007815	tarbp2	100	84.438	Poecilia_reticulata
ENSGMOG00000001290	tarbp2	100	64.489	ENSPPYG00000004583	TARBP2	100	64.387	Pongo_abelii
ENSGMOG00000001290	tarbp2	78	62.799	ENSPCAG00000005352	TARBP2	64	68.511	Procavia_capensis
ENSGMOG00000001290	tarbp2	100	64.595	ENSPCOG00000013102	TARBP2	94	77.027	Propithecus_coquereli
ENSGMOG00000001290	tarbp2	100	64.516	ENSPVAG00000012286	TARBP2	100	62.500	Pteropus_vampyrus
ENSGMOG00000001290	tarbp2	100	86.167	ENSPNYG00000014125	tarbp2	100	86.167	Pundamilia_nyererei
ENSGMOG00000001290	tarbp2	100	81.609	ENSPNAG00000011128	tarbp2	100	81.609	Pygocentrus_nattereri
ENSGMOG00000001290	tarbp2	100	64.402	ENSRNOG00000042355	Tarbp2	100	64.033	Rattus_norvegicus
ENSGMOG00000001290	tarbp2	100	65.135	ENSRBIG00000027150	TARBP2	94	77.027	Rhinopithecus_bieti
ENSGMOG00000001290	tarbp2	100	65.135	ENSRROG00000044783	TARBP2	94	77.027	Rhinopithecus_roxellana
ENSGMOG00000001290	tarbp2	100	64.456	ENSSBOG00000027305	TARBP2	94	77.027	Saimiri_boliviensis_boliviensis
ENSGMOG00000001290	tarbp2	94	70.517	ENSSHAG00000007064	TARBP2	100	69.817	Sarcophilus_harrisii
ENSGMOG00000001290	tarbp2	100	77.839	ENSSFOG00015010784	tarbp2	100	78.056	Scleropages_formosus
ENSGMOG00000001290	tarbp2	100	85.269	ENSSMAG00000012769	tarbp2	100	85.269	Scophthalmus_maximus
ENSGMOG00000001290	tarbp2	100	86.455	ENSSDUG00000018818	tarbp2	100	86.455	Seriola_dumerili
ENSGMOG00000001290	tarbp2	100	86.455	ENSSLDG00000001835	tarbp2	100	86.455	Seriola_lalandi_dorsalis
ENSGMOG00000001290	tarbp2	76	67.317	ENSSARG00000001010	TARBP2	73	67.317	Sorex_araneus
ENSGMOG00000001290	tarbp2	68	71.429	ENSSPUG00000005895	TARBP2	73	70.886	Sphenodon_punctatus
ENSGMOG00000001290	tarbp2	100	87.320	ENSSPAG00000022797	tarbp2	100	87.320	Stegastes_partitus
ENSGMOG00000001290	tarbp2	100	65.405	ENSSSCG00000000276	TARBP2	100	66.476	Sus_scrofa
ENSGMOG00000001290	tarbp2	71	55.303	ENSTGUG00000017031	TARBP2	100	54.406	Taeniopygia_guttata
ENSGMOG00000001290	tarbp2	100	84.438	ENSTRUG00000014379	tarbp2	100	84.438	Takifugu_rubripes
ENSGMOG00000001290	tarbp2	100	84.438	ENSTNIG00000007065	tarbp2	100	84.438	Tetraodon_nigroviridis
ENSGMOG00000001290	tarbp2	50	68.362	ENSTBEG00000012751	-	55	68.362	Tupaia_belangeri
ENSGMOG00000001290	tarbp2	100	65.761	ENSTTRG00000017177	TARBP2	100	65.217	Tursiops_truncatus
ENSGMOG00000001290	tarbp2	100	66.216	ENSUAMG00000009011	TARBP2	100	65.676	Ursus_americanus
ENSGMOG00000001290	tarbp2	100	65.676	ENSUMAG00000010461	TARBP2	100	65.135	Ursus_maritimus
ENSGMOG00000001290	tarbp2	100	65.676	ENSVVUG00000028150	TARBP2	100	66.762	Vulpes_vulpes
ENSGMOG00000001290	tarbp2	97	69.828	ENSXETG00000012644	tarbp2	97	69.828	Xenopus_tropicalis
ENSGMOG00000001290	tarbp2	100	85.591	ENSXMAG00000017836	tarbp2	100	85.591	Xiphophorus_maculatus