EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000001323 (Gene tree)
Gene ID: -
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 7747 bases
Position: chrGeneScaffold_4123:124106-131852
Accession: ZDB-GENE-050522-540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000001383	tRNA_Me_trans	PF03054.16	4.2e-111	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000001432	-	1215	-	ENSGMOP00000001383	405 (aa)	-	UPI00023EF982

Gene Model

Click here to download ENSGMOG00000001323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000001323's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000001323	trmu	100	63.882	ENSG00000100416	TRMU	95	72.656	Homo_sapiens
ENSGMOG00000001323	trmu	100	72.727	ENSAPOG00000014458	trmu	97	72.727	Acanthochromis_polyacanthus
ENSGMOG00000001323	trmu	99	64.268	ENSAMEG00000003319	TRMU	96	64.268	Ailuropoda_melanoleuca
ENSGMOG00000001323	trmu	100	72.236	ENSACIG00000002101	trmu	97	72.236	Amphilophus_citrinellus
ENSGMOG00000001323	trmu	100	73.464	ENSAOCG00000013155	trmu	97	73.464	Amphiprion_ocellaris
ENSGMOG00000001323	trmu	100	73.219	ENSAPEG00000013350	trmu	97	73.219	Amphiprion_percula
ENSGMOG00000001323	trmu	99	71.782	ENSATEG00000007814	trmu	97	71.782	Anabas_testudineus
ENSGMOG00000001323	trmu	95	63.802	ENSAPLG00000016380	TRMU	97	63.802	Anas_platyrhynchos
ENSGMOG00000001323	trmu	99	62.531	ENSACAG00000007720	TRMU	96	62.531	Anolis_carolinensis
ENSGMOG00000001323	trmu	100	63.882	ENSANAG00000038053	TRMU	95	63.882	Aotus_nancymaae
ENSGMOG00000001323	trmu	100	73.464	ENSACLG00000005395	trmu	98	73.190	Astatotilapia_calliptera
ENSGMOG00000001323	trmu	98	72.362	ENSAMXG00000005282	trmu	95	72.362	Astyanax_mexicanus
ENSGMOG00000001323	trmu	100	63.636	ENSBTAG00000005595	TRMU	97	63.636	Bos_taurus
ENSGMOG00000001323	trmu	96	34.837	WBGene00007114	mttu-1	99	34.837	Caenorhabditis_elegans
ENSGMOG00000001323	trmu	99	63.275	ENSCJAG00000000198	TRMU	95	63.275	Callithrix_jacchus
ENSGMOG00000001323	trmu	100	63.636	ENSCAFG00000000779	TRMU	95	63.636	Canis_familiaris
ENSGMOG00000001323	trmu	100	63.636	ENSCAFG00020009184	TRMU	95	63.636	Canis_lupus_dingo
ENSGMOG00000001323	trmu	100	63.145	ENSCHIG00000017074	TRMU	97	63.145	Capra_hircus
ENSGMOG00000001323	trmu	100	64.128	ENSTSYG00000003853	TRMU	96	64.128	Carlito_syrichta
ENSGMOG00000001323	trmu	95	61.940	ENSCAPG00000013034	TRMU	94	61.940	Cavia_aperea
ENSGMOG00000001323	trmu	100	65.111	ENSCPOG00000020780	TRMU	96	65.111	Cavia_porcellus
ENSGMOG00000001323	trmu	100	62.899	ENSCCAG00000021641	TRMU	96	62.899	Cebus_capucinus
ENSGMOG00000001323	trmu	99	63.524	ENSCATG00000032800	TRMU	95	63.524	Cercocebus_atys
ENSGMOG00000001323	trmu	100	64.373	ENSCLAG00000017269	TRMU	96	64.373	Chinchilla_lanigera
ENSGMOG00000001323	trmu	100	63.391	ENSCSAG00000005279	TRMU	96	63.391	Chlorocebus_sabaeus
ENSGMOG00000001323	trmu	93	63.130	ENSCPBG00000011621	TRMU	93	63.130	Chrysemys_picta_bellii
ENSGMOG00000001323	trmu	98	41.895	ENSCING00000019371	-	97	41.895	Ciona_intestinalis
ENSGMOG00000001323	trmu	100	62.899	ENSCANG00000041645	TRMU	96	62.899	Colobus_angolensis_palliatus
ENSGMOG00000001323	trmu	100	62.162	ENSCGRG00001001739	Trmu	96	62.162	Cricetulus_griseus_chok1gshd
ENSGMOG00000001323	trmu	100	58.231	ENSCGRG00000002781	Trmu	96	58.231	Cricetulus_griseus_crigri
ENSGMOG00000001323	trmu	100	69.927	ENSCSEG00000012382	trmu	97	69.927	Cynoglossus_semilaevis
ENSGMOG00000001323	trmu	99	72.167	ENSCVAG00000001366	trmu	97	72.167	Cyprinodon_variegatus
ENSGMOG00000001323	trmu	98	68.844	ENSDARG00000043734	trmu	95	68.844	Danio_rerio
ENSGMOG00000001323	trmu	56	56.388	ENSDNOG00000047245	-	94	50.936	Dasypus_novemcinctus
ENSGMOG00000001323	trmu	99	63.704	ENSDORG00000007455	Trmu	98	63.704	Dipodomys_ordii
ENSGMOG00000001323	trmu	93	41.067	FBgn0040337	CG3021	95	41.282	Drosophila_melanogaster
ENSGMOG00000001323	trmu	96	51.399	ENSEBUG00000007454	trmu	99	49.570	Eptatretus_burgeri
ENSGMOG00000001323	trmu	100	64.619	ENSEASG00005021725	TRMU	96	64.619	Equus_asinus_asinus
ENSGMOG00000001323	trmu	100	64.619	ENSECAG00000000467	TRMU	95	64.619	Equus_caballus
ENSGMOG00000001323	trmu	70	46.127	ENSEEUG00000000074	-	68	46.127	Erinaceus_europaeus
ENSGMOG00000001323	trmu	100	72.549	ENSELUG00000009464	trmu	99	73.118	Esox_lucius
ENSGMOG00000001323	trmu	99	64.516	ENSFCAG00000006533	TRMU	95	64.516	Felis_catus
ENSGMOG00000001323	trmu	93	63.802	ENSFALG00000010035	TRMU	96	63.802	Ficedula_albicollis
ENSGMOG00000001323	trmu	93	63.757	ENSFDAG00000017472	TRMU	95	63.757	Fukomys_damarensis
ENSGMOG00000001323	trmu	100	71.253	ENSFHEG00000003162	trmu	98	71.429	Fundulus_heteroclitus
ENSGMOG00000001323	trmu	98	63.391	ENSGALG00000031922	TRMU	95	63.391	Gallus_gallus
ENSGMOG00000001323	trmu	99	72.414	ENSGAFG00000013331	trmu	96	72.414	Gambusia_affinis
ENSGMOG00000001323	trmu	100	73.171	ENSGACG00000019024	trmu	97	73.171	Gasterosteus_aculeatus
ENSGMOG00000001323	trmu	100	63.882	ENSGGOG00000000203	TRMU	96	63.882	Gorilla_gorilla
ENSGMOG00000001323	trmu	100	72.973	ENSHBUG00000023421	trmu	98	72.654	Haplochromis_burtoni
ENSGMOG00000001323	trmu	99	63.300	ENSHGLG00000009278	TRMU	95	63.300	Heterocephalus_glaber_female
ENSGMOG00000001323	trmu	99	63.300	ENSHGLG00100018863	TRMU	95	63.300	Heterocephalus_glaber_male
ENSGMOG00000001323	trmu	99	71.990	ENSHCOG00000013459	trmu	97	71.990	Hippocampus_comes
ENSGMOG00000001323	trmu	99	71.216	ENSIPUG00000009785	trmu	98	71.216	Ictalurus_punctatus
ENSGMOG00000001323	trmu	100	63.145	ENSSTOG00000010993	TRMU	96	63.145	Ictidomys_tridecemlineatus
ENSGMOG00000001323	trmu	99	62.562	ENSJJAG00000000667	Trmu	96	62.562	Jaculus_jaculus
ENSGMOG00000001323	trmu	100	70.762	ENSKMAG00000008516	trmu	97	70.762	Kryptolebias_marmoratus
ENSGMOG00000001323	trmu	100	73.219	ENSLBEG00000018831	trmu	97	73.219	Labrus_bergylta
ENSGMOG00000001323	trmu	99	65.926	ENSLACG00000013713	TRMU	96	65.926	Latimeria_chalumnae
ENSGMOG00000001323	trmu	99	68.889	ENSLOCG00000016066	trmu	96	68.889	Lepisosteus_oculatus
ENSGMOG00000001323	trmu	100	56.829	ENSLAFG00000005129	TRMU	97	56.829	Loxodonta_africana
ENSGMOG00000001323	trmu	100	63.391	ENSMFAG00000039767	TRMU	96	63.391	Macaca_fascicularis
ENSGMOG00000001323	trmu	100	63.391	ENSMMUG00000000807	TRMU	96	63.391	Macaca_mulatta
ENSGMOG00000001323	trmu	100	63.391	ENSMNEG00000028164	TRMU	96	63.391	Macaca_nemestrina
ENSGMOG00000001323	trmu	99	63.524	ENSMLEG00000033884	TRMU	95	63.524	Mandrillus_leucophaeus
ENSGMOG00000001323	trmu	99	73.892	ENSMAMG00000004717	trmu	97	73.892	Mastacembelus_armatus
ENSGMOG00000001323	trmu	100	73.219	ENSMZEG00005015797	trmu	97	73.219	Maylandia_zebra
ENSGMOG00000001323	trmu	79	62.385	ENSMGAG00000007550	TRMU	95	62.385	Meleagris_gallopavo
ENSGMOG00000001323	trmu	99	63.027	ENSMAUG00000022282	Trmu	96	63.027	Mesocricetus_auratus
ENSGMOG00000001323	trmu	100	62.899	ENSMICG00000029046	TRMU	98	62.899	Microcebus_murinus
ENSGMOG00000001323	trmu	100	61.916	ENSMOCG00000014641	Trmu	97	61.916	Microtus_ochrogaster
ENSGMOG00000001323	trmu	100	70.762	ENSMMOG00000007229	trmu	97	70.762	Mola_mola
ENSGMOG00000001323	trmu	99	61.425	ENSMODG00000007433	TRMU	94	61.425	Monodelphis_domestica
ENSGMOG00000001323	trmu	100	71.990	ENSMALG00000007721	trmu	97	71.990	Monopterus_albus
ENSGMOG00000001323	trmu	100	62.162	MGP_CAROLIEiJ_G0020134	Trmu	97	62.162	Mus_caroli
ENSGMOG00000001323	trmu	100	62.162	ENSMUSG00000022386	Trmu	97	62.162	Mus_musculus
ENSGMOG00000001323	trmu	100	61.916	MGP_PahariEiJ_G0020139	Trmu	97	61.916	Mus_pahari
ENSGMOG00000001323	trmu	100	62.162	MGP_SPRETEiJ_G0021031	Trmu	97	62.162	Mus_spretus
ENSGMOG00000001323	trmu	100	63.145	ENSMPUG00000002523	TRMU	96	63.145	Mustela_putorius_furo
ENSGMOG00000001323	trmu	100	64.128	ENSNGAG00000005132	Trmu	97	64.128	Nannospalax_galili
ENSGMOG00000001323	trmu	100	73.219	ENSNBRG00000022690	trmu	99	72.236	Neolamprologus_brichardi
ENSGMOG00000001323	trmu	100	63.636	ENSNLEG00000015773	TRMU	96	63.636	Nomascus_leucogenys
ENSGMOG00000001323	trmu	81	50.301	ENSMEUG00000000216	TRMU	99	50.301	Notamacropus_eugenii
ENSGMOG00000001323	trmu	100	63.882	ENSODEG00000014745	TRMU	97	63.570	Octodon_degus
ENSGMOG00000001323	trmu	100	72.482	ENSONIG00000009821	trmu	97	72.482	Oreochromis_niloticus
ENSGMOG00000001323	trmu	94	60.733	ENSOANG00000001891	TRMU	96	60.733	Ornithorhynchus_anatinus
ENSGMOG00000001323	trmu	94	63.684	ENSOCUG00000003664	TRMU	94	61.139	Oryctolagus_cuniculus
ENSGMOG00000001323	trmu	100	71.253	ENSORLG00000019015	trmu	97	71.253	Oryzias_latipes
ENSGMOG00000001323	trmu	100	71.499	ENSORLG00020006830	trmu	97	71.499	Oryzias_latipes_hni
ENSGMOG00000001323	trmu	100	71.499	ENSORLG00015003907	trmu	97	71.499	Oryzias_latipes_hsok
ENSGMOG00000001323	trmu	59	72.269	ENSOMEG00000015541	trmu	86	72.269	Oryzias_melastigma
ENSGMOG00000001323	trmu	100	62.408	ENSOGAG00000008096	TRMU	97	62.408	Otolemur_garnettii
ENSGMOG00000001323	trmu	95	61.039	ENSOARG00000019475	TRMU	93	61.039	Ovis_aries
ENSGMOG00000001323	trmu	100	63.882	ENSPPAG00000033944	TRMU	96	63.882	Pan_paniscus
ENSGMOG00000001323	trmu	99	64.516	ENSPPRG00000004197	TRMU	95	64.516	Panthera_pardus
ENSGMOG00000001323	trmu	67	65.934	ENSPTIG00000014122	TRMU	97	66.292	Panthera_tigris_altaica
ENSGMOG00000001323	trmu	100	63.882	ENSPTRG00000014510	TRMU	96	63.882	Pan_troglodytes
ENSGMOG00000001323	trmu	98	63.819	ENSPANG00000023074	TRMU	97	60.705	Papio_anubis
ENSGMOG00000001323	trmu	99	71.358	ENSPKIG00000002849	trmu	97	71.358	Paramormyrops_kingsleyae
ENSGMOG00000001323	trmu	91	63.859	ENSPSIG00000013020	TRMU	95	63.859	Pelodiscus_sinensis
ENSGMOG00000001323	trmu	100	73.219	ENSPMGG00000004083	trmu	97	73.219	Periophthalmus_magnuspinnatus
ENSGMOG00000001323	trmu	99	62.283	ENSPEMG00000014007	Trmu	96	62.283	Peromyscus_maniculatus_bairdii
ENSGMOG00000001323	trmu	98	60.957	ENSPCIG00000009923	TRMU	93	60.848	Phascolarctos_cinereus
ENSGMOG00000001323	trmu	95	70.757	ENSPFOG00000008197	trmu	85	70.757	Poecilia_formosa
ENSGMOG00000001323	trmu	100	71.253	ENSPLAG00000008414	trmu	97	71.253	Poecilia_latipinna
ENSGMOG00000001323	trmu	100	71.499	ENSPMEG00000004326	trmu	97	71.499	Poecilia_mexicana
ENSGMOG00000001323	trmu	100	71.744	ENSPREG00000007980	trmu	97	71.744	Poecilia_reticulata
ENSGMOG00000001323	trmu	100	63.882	ENSPPYG00000011949	TRMU	96	63.882	Pongo_abelii
ENSGMOG00000001323	trmu	94	58.839	ENSPCAG00000013462	TRMU	96	58.839	Procavia_capensis
ENSGMOG00000001323	trmu	100	62.654	ENSPCOG00000016539	TRMU	97	62.654	Propithecus_coquereli
ENSGMOG00000001323	trmu	100	57.494	ENSPVAG00000013202	TRMU	97	57.494	Pteropus_vampyrus
ENSGMOG00000001323	trmu	100	73.219	ENSPNYG00000005629	trmu	97	73.219	Pundamilia_nyererei
ENSGMOG00000001323	trmu	98	72.362	ENSPNAG00000006339	trmu	92	72.362	Pygocentrus_nattereri
ENSGMOG00000001323	trmu	100	62.162	ENSRNOG00000016465	Trmu	97	62.162	Rattus_norvegicus
ENSGMOG00000001323	trmu	100	62.162	ENSRBIG00000038973	TRMU	96	62.162	Rhinopithecus_bieti
ENSGMOG00000001323	trmu	100	62.408	ENSRROG00000004267	TRMU	96	62.408	Rhinopithecus_roxellana
ENSGMOG00000001323	trmu	100	63.636	ENSSBOG00000030184	TRMU	96	63.636	Saimiri_boliviensis_boliviensis
ENSGMOG00000001323	trmu	92	67.473	ENSSFOG00015020664	trmu	97	67.473	Scleropages_formosus
ENSGMOG00000001323	trmu	100	73.956	ENSSMAG00000019450	trmu	97	73.956	Scophthalmus_maximus
ENSGMOG00000001323	trmu	100	72.973	ENSSDUG00000011913	trmu	97	72.973	Seriola_dumerili
ENSGMOG00000001323	trmu	100	72.727	ENSSLDG00000011684	trmu	97	72.727	Seriola_lalandi_dorsalis
ENSGMOG00000001323	trmu	98	56.892	ENSSPUG00000017123	TRMU	93	56.892	Sphenodon_punctatus
ENSGMOG00000001323	trmu	100	70.516	ENSSPAG00000021875	trmu	97	70.516	Stegastes_partitus
ENSGMOG00000001323	trmu	100	63.391	ENSSSCG00000000007	TRMU	96	63.391	Sus_scrofa
ENSGMOG00000001323	trmu	93	64.721	ENSTGUG00000003663	-	100	64.721	Taeniopygia_guttata
ENSGMOG00000001323	trmu	100	73.219	ENSTRUG00000001231	trmu	98	73.219	Takifugu_rubripes
ENSGMOG00000001323	trmu	100	72.236	ENSTNIG00000010484	trmu	96	72.236	Tetraodon_nigroviridis
ENSGMOG00000001323	trmu	74	51.667	ENSTBEG00000011276	-	76	51.667	Tupaia_belangeri
ENSGMOG00000001323	trmu	98	64.912	ENSTTRG00000004160	TRMU	94	64.912	Tursiops_truncatus
ENSGMOG00000001323	trmu	72	65.424	ENSUAMG00000024825	TRMU	97	65.424	Ursus_americanus
ENSGMOG00000001323	trmu	98	54.660	ENSUMAG00000019079	TRMU	97	65.769	Ursus_maritimus
ENSGMOG00000001323	trmu	52	63.507	ENSVPAG00000000685	-	95	63.507	Vicugna_pacos
ENSGMOG00000001323	trmu	100	63.636	ENSVVUG00000024963	TRMU	96	63.636	Vulpes_vulpes
ENSGMOG00000001323	trmu	99	64.286	ENSXETG00000023304	trmu	95	64.286	Xenopus_tropicalis
ENSGMOG00000001323	trmu	99	69.682	ENSXCOG00000015105	trmu	97	69.682	Xiphophorus_couchianus
ENSGMOG00000001323	trmu	99	72.414	ENSXMAG00000006697	trmu	97	72.414	Xiphophorus_maculatus