EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000001475 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 2334 bases
Position: chrGeneScaffold_2920:200930-203263
Accession: 37237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000001532	RRM_1	PF00076.22	6.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000001587	PABPN1L-201	798	-	ENSGMOP00000001532	265 (aa)	-	UPI00023EF9DC

Gene Model

Click here to download ENSGMOG00000001475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000001475's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000001475	PABPN1L	63	59.639	ENSGMOG00000003922	pabpn1	57	56.140

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000001475	PABPN1L	68	55.376	ENSG00000205022	PABPN1L	54	55.333	Homo_sapiens
ENSGMOG00000001475	PABPN1L	91	78.689	ENSAPOG00000000685	PABPN1L	78	77.049	Acanthochromis_polyacanthus
ENSGMOG00000001475	PABPN1L	75	84.925	ENSACIG00000021400	PABPN1L	98	74.793	Amphilophus_citrinellus
ENSGMOG00000001475	PABPN1L	100	73.408	ENSAOCG00000019844	PABPN1L	100	77.528	Amphiprion_ocellaris
ENSGMOG00000001475	PABPN1L	100	73.034	ENSAPEG00000019534	PABPN1L	100	77.154	Amphiprion_percula
ENSGMOG00000001475	PABPN1L	91	80.579	ENSATEG00000011646	PABPN1L	95	78.099	Anabas_testudineus
ENSGMOG00000001475	PABPN1L	69	56.831	ENSACAG00000013250	PABPN1L	74	58.108	Anolis_carolinensis
ENSGMOG00000001475	PABPN1L	68	54.737	ENSANAG00000038178	PABPN1L	54	56.209	Aotus_nancymaae
ENSGMOG00000001475	PABPN1L	100	75.188	ENSACLG00000025147	PABPN1L	100	75.188	Astatotilapia_calliptera
ENSGMOG00000001475	PABPN1L	56	72.973	ENSAMXG00000010873	PABPN1L	55	70.946	Astyanax_mexicanus
ENSGMOG00000001475	PABPN1L	67	53.684	ENSCJAG00000045284	PABPN1L	55	54.000	Callithrix_jacchus
ENSGMOG00000001475	PABPN1L	68	55.263	ENSCCAG00000027631	PABPN1L	54	55.414	Cebus_capucinus
ENSGMOG00000001475	PABPN1L	68	53.591	ENSCATG00000031060	PABPN1L	55	55.333	Cercocebus_atys
ENSGMOG00000001475	PABPN1L	100	68.914	ENSCSEG00000001142	pabpn1l	100	70.787	Cynoglossus_semilaevis
ENSGMOG00000001475	PABPN1L	100	72.285	ENSCVAG00000015547	PABPN1L	100	74.906	Cyprinodon_variegatus
ENSGMOG00000001475	PABPN1L	96	69.531	ENSELUG00000018385	PABPN1L	96	69.922	Esox_lucius
ENSGMOG00000001475	PABPN1L	62	56.442	ENSFALG00000003319	PABPN1L	59	55.629	Ficedula_albicollis
ENSGMOG00000001475	PABPN1L	100	74.436	ENSFHEG00000018295	PABPN1L	100	73.308	Fundulus_heteroclitus
ENSGMOG00000001475	PABPN1L	55	59.864	ENSGALG00000006242	PABPN1L	66	63.025	Gallus_gallus
ENSGMOG00000001475	PABPN1L	100	72.285	ENSGAFG00000012565	PABPN1L	100	73.408	Gambusia_affinis
ENSGMOG00000001475	PABPN1L	100	71.004	ENSGACG00000015428	PABPN1L	100	72.491	Gasterosteus_aculeatus
ENSGMOG00000001475	PABPN1L	68	54.737	ENSGGOG00000012670	PABPN1L	55	56.000	Gorilla_gorilla
ENSGMOG00000001475	PABPN1L	100	78.195	ENSHBUG00000002388	PABPN1L	100	75.564	Haplochromis_burtoni
ENSGMOG00000001475	PABPN1L	100	69.853	ENSHCOG00000004151	PABPN1L	99	71.691	Hippocampus_comes
ENSGMOG00000001475	PABPN1L	67	69.274	ENSIPUG00000023583	PABPN1L	87	69.274	Ictalurus_punctatus
ENSGMOG00000001475	PABPN1L	69	49.180	ENSJJAG00000006433	Pabpn1l	54	51.656	Jaculus_jaculus
ENSGMOG00000001475	PABPN1L	80	78.774	ENSKMAG00000001112	PABPN1L	92	77.358	Kryptolebias_marmoratus
ENSGMOG00000001475	PABPN1L	100	71.375	ENSLBEG00000011647	PABPN1L	97	76.580	Labrus_bergylta
ENSGMOG00000001475	PABPN1L	68	54.211	ENSMFAG00000002924	PABPN1L	55	55.333	Macaca_fascicularis
ENSGMOG00000001475	PABPN1L	68	54.497	ENSMMUG00000012438	PABPN1L	54	56.329	Macaca_mulatta
ENSGMOG00000001475	PABPN1L	68	54.211	ENSMNEG00000044808	PABPN1L	55	55.333	Macaca_nemestrina
ENSGMOG00000001475	PABPN1L	68	54.450	ENSMLEG00000032667	PABPN1L	55	55.975	Mandrillus_leucophaeus
ENSGMOG00000001475	PABPN1L	100	75.188	ENSMZEG00005002186	PABPN1L	100	75.188	Maylandia_zebra
ENSGMOG00000001475	PABPN1L	75	79.000	ENSMMOG00000017714	PABPN1L	86	78.283	Mola_mola
ENSGMOG00000001475	PABPN1L	100	74.812	ENSMALG00000016926	PABPN1L	100	72.556	Monopterus_albus
ENSGMOG00000001475	PABPN1L	91	81.328	ENSNBRG00000017078	PABPN1L	100	78.423	Neolamprologus_brichardi
ENSGMOG00000001475	PABPN1L	100	74.436	ENSORLG00000026560	PABPN1L	100	72.180	Oryzias_latipes
ENSGMOG00000001475	PABPN1L	100	74.060	ENSORLG00020015068	PABPN1L	100	71.805	Oryzias_latipes_hni
ENSGMOG00000001475	PABPN1L	100	74.436	ENSORLG00015000397	PABPN1L	100	72.180	Oryzias_latipes_hsok
ENSGMOG00000001475	PABPN1L	100	73.408	ENSOMEG00000017896	PABPN1L	72	71.536	Oryzias_melastigma
ENSGMOG00000001475	PABPN1L	68	54.839	ENSPPAG00000028866	PABPN1L	54	55.333	Pan_paniscus
ENSGMOG00000001475	PABPN1L	74	47.179	ENSPTIG00000015606	PABPN1L	62	47.879	Panthera_tigris_altaica
ENSGMOG00000001475	PABPN1L	68	54.839	ENSPTRG00000031120	PABPN1L	54	55.333	Pan_troglodytes
ENSGMOG00000001475	PABPN1L	68	53.591	ENSPANG00000026039	PABPN1L	55	55.333	Papio_anubis
ENSGMOG00000001475	PABPN1L	61	62.195	ENSPSIG00000003404	PABPN1L	58	68.468	Pelodiscus_sinensis
ENSGMOG00000001475	PABPN1L	81	76.389	ENSPMGG00000013927	PABPN1L	94	75.000	Periophthalmus_magnuspinnatus
ENSGMOG00000001475	PABPN1L	100	72.659	ENSPFOG00000007001	PABPN1L	100	73.783	Poecilia_formosa
ENSGMOG00000001475	PABPN1L	100	72.659	ENSPLAG00000018431	PABPN1L	100	73.783	Poecilia_latipinna
ENSGMOG00000001475	PABPN1L	100	72.659	ENSPMEG00000009108	PABPN1L	100	73.783	Poecilia_mexicana
ENSGMOG00000001475	PABPN1L	68	71.196	ENSPMEG00000000169	-	91	72.283	Poecilia_mexicana
ENSGMOG00000001475	PABPN1L	83	78.182	ENSPREG00000022533	PABPN1L	92	76.852	Poecilia_reticulata
ENSGMOG00000001475	PABPN1L	69	54.450	ENSPPYG00000007655	PABPN1L	54	55.346	Pongo_abelii
ENSGMOG00000001475	PABPN1L	68	51.832	ENSPCOG00000024077	PABPN1L	50	58.278	Propithecus_coquereli
ENSGMOG00000001475	PABPN1L	100	75.188	ENSPNYG00000004803	PABPN1L	100	75.188	Pundamilia_nyererei
ENSGMOG00000001475	PABPN1L	68	52.604	ENSRBIG00000030740	PABPN1L	55	54.000	Rhinopithecus_bieti
ENSGMOG00000001475	PABPN1L	68	53.125	ENSRROG00000032240	-	55	54.000	Rhinopithecus_roxellana
ENSGMOG00000001475	PABPN1L	68	53.723	ENSSBOG00000018410	PABPN1L	54	55.414	Saimiri_boliviensis_boliviensis
ENSGMOG00000001475	PABPN1L	100	72.059	ENSSMAG00000021348	PABPN1L	100	74.632	Scophthalmus_maximus
ENSGMOG00000001475	PABPN1L	100	73.783	ENSSDUG00000006986	PABPN1L	100	75.281	Seriola_dumerili
ENSGMOG00000001475	PABPN1L	100	73.783	ENSSLDG00000021845	PABPN1L	100	75.281	Seriola_lalandi_dorsalis
ENSGMOG00000001475	PABPN1L	100	74.157	ENSSPAG00000017978	PABPN1L	100	74.532	Stegastes_partitus
ENSGMOG00000001475	PABPN1L	62	54.217	ENSSSCG00000036367	PABPN1L	54	53.595	Sus_scrofa
ENSGMOG00000001475	PABPN1L	100	66.541	ENSTRUG00000024725	PABPN1L	100	65.414	Takifugu_rubripes
ENSGMOG00000001475	PABPN1L	72	80.729	ENSTNIG00000009416	PABPN1L	100	79.167	Tetraodon_nigroviridis
ENSGMOG00000001475	PABPN1L	61	54.386	ENSXETG00000011258	pabpn1l	78	52.663	Xenopus_tropicalis
ENSGMOG00000001475	PABPN1L	79	79.621	ENSXCOG00000003254	PABPN1L	92	77.315	Xiphophorus_couchianus
ENSGMOG00000001475	PABPN1L	74	81.726	ENSXMAG00000029090	PABPN1L	89	80.203	Xiphophorus_maculatus