EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000001838 (Gene tree)
Gene ID: -
Gene Symbol: urb1
Alias: mp:zf637-1-000544|zf637-1-000544
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 28363 bases
Position: chrGeneScaffold_2296:583415-611777
Accession: ZDB-GENE-030131-5181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000002037	Npa1	PF11707.8	3.3e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000002104	-	6552	-	ENSGMOP00000002037	2184 (aa)	-	UPI00023EFF11

Gene Model

Click here to download ENSGMOG00000001838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000001838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000001838	urb1	93	47.268	ENSG00000142207	URB1	93	47.350	Homo_sapiens
ENSGMOG00000001838	urb1	94	57.456	ENSAPOG00000020308	urb1	93	58.757	Acanthochromis_polyacanthus
ENSGMOG00000001838	urb1	93	47.695	ENSAMEG00000011998	URB1	92	47.695	Ailuropoda_melanoleuca
ENSGMOG00000001838	urb1	90	55.117	ENSACIG00000003248	urb1	92	55.027	Amphilophus_citrinellus
ENSGMOG00000001838	urb1	94	56.417	ENSAOCG00000010364	urb1	93	55.882	Amphiprion_ocellaris
ENSGMOG00000001838	urb1	94	56.150	ENSAPEG00000010758	urb1	93	56.328	Amphiprion_percula
ENSGMOG00000001838	urb1	94	59.269	ENSATEG00000011790	urb1	93	59.269	Anabas_testudineus
ENSGMOG00000001838	urb1	92	47.623	ENSAPLG00000012791	URB1	94	47.887	Anas_platyrhynchos
ENSGMOG00000001838	urb1	94	45.439	ENSACAG00000002817	URB1	92	45.407	Anolis_carolinensis
ENSGMOG00000001838	urb1	93	48.050	ENSANAG00000024617	URB1	92	48.089	Aotus_nancymaae
ENSGMOG00000001838	urb1	94	57.890	ENSACLG00000024865	urb1	93	57.927	Astatotilapia_calliptera
ENSGMOG00000001838	urb1	93	48.637	ENSAMXG00000012306	urb1	93	48.197	Astyanax_mexicanus
ENSGMOG00000001838	urb1	93	47.132	ENSBTAG00000012412	URB1	92	47.573	Bos_taurus
ENSGMOG00000001838	urb1	92	47.915	ENSCJAG00000009118	URB1	91	48.089	Callithrix_jacchus
ENSGMOG00000001838	urb1	93	47.318	ENSCAFG00000008892	URB1	92	47.318	Canis_familiaris
ENSGMOG00000001838	urb1	93	47.434	ENSCAFG00020025994	-	92	47.434	Canis_lupus_dingo
ENSGMOG00000001838	urb1	93	47.080	ENSCAFG00020025987	-	92	47.080	Canis_lupus_dingo
ENSGMOG00000001838	urb1	93	47.225	ENSCHIG00000015645	URB1	92	47.225	Capra_hircus
ENSGMOG00000001838	urb1	94	45.345	ENSTSYG00000013286	URB1	93	45.172	Carlito_syrichta
ENSGMOG00000001838	urb1	93	45.253	ENSCAPG00000015589	URB1	93	45.075	Cavia_aperea
ENSGMOG00000001838	urb1	94	47.186	ENSCPOG00000006748	URB1	93	47.186	Cavia_porcellus
ENSGMOG00000001838	urb1	93	47.745	ENSCCAG00000021299	URB1	92	48.184	Cebus_capucinus
ENSGMOG00000001838	urb1	94	47.441	ENSCATG00000042630	URB1	93	47.710	Cercocebus_atys
ENSGMOG00000001838	urb1	94	47.710	ENSCLAG00000005262	URB1	93	47.710	Chinchilla_lanigera
ENSGMOG00000001838	urb1	94	46.432	ENSCSAG00000009584	URB1	93	46.701	Chlorocebus_sabaeus
ENSGMOG00000001838	urb1	94	47.537	ENSCPBG00000006454	URB1	93	47.537	Chrysemys_picta_bellii
ENSGMOG00000001838	urb1	94	47.615	ENSCANG00000031088	URB1	93	47.882	Colobus_angolensis_palliatus
ENSGMOG00000001838	urb1	93	46.454	ENSCGRG00001010616	Urb1	92	46.344	Cricetulus_griseus_chok1gshd
ENSGMOG00000001838	urb1	92	46.709	ENSCGRG00000015840	Urb1	93	46.709	Cricetulus_griseus_crigri
ENSGMOG00000001838	urb1	94	55.864	ENSCSEG00000012616	urb1	93	55.864	Cynoglossus_semilaevis
ENSGMOG00000001838	urb1	91	59.096	ENSCVAG00000009076	urb1	93	59.096	Cyprinodon_variegatus
ENSGMOG00000001838	urb1	91	57.927	ENSDARG00000060308	urb1	93	58.750	Danio_rerio
ENSGMOG00000001838	urb1	79	48.025	ENSDNOG00000015586	URB1	91	48.025	Dasypus_novemcinctus
ENSGMOG00000001838	urb1	93	47.308	ENSDORG00000006735	Urb1	92	47.703	Dipodomys_ordii
ENSGMOG00000001838	urb1	85	50.382	ENSETEG00000009080	URB1	84	50.382	Echinops_telfairi
ENSGMOG00000001838	urb1	94	46.067	ENSEASG00005007711	URB1	93	46.067	Equus_asinus_asinus
ENSGMOG00000001838	urb1	94	46.851	ENSECAG00000013206	URB1	91	51.508	Equus_caballus
ENSGMOG00000001838	urb1	54	53.913	ENSEEUG00000003626	-	52	53.913	Erinaceus_europaeus
ENSGMOG00000001838	urb1	94	56.530	ENSELUG00000020516	urb1	93	56.343	Esox_lucius
ENSGMOG00000001838	urb1	93	46.919	ENSFCAG00000002177	URB1	92	47.271	Felis_catus
ENSGMOG00000001838	urb1	92	46.567	ENSFALG00000004636	URB1	93	46.438	Ficedula_albicollis
ENSGMOG00000001838	urb1	94	46.875	ENSFDAG00000007288	URB1	89	46.805	Fukomys_damarensis
ENSGMOG00000001838	urb1	94	53.111	ENSFHEG00000000202	urb1	93	55.023	Fundulus_heteroclitus
ENSGMOG00000001838	urb1	93	48.059	ENSGALG00000015887	URB1	92	48.059	Gallus_gallus
ENSGMOG00000001838	urb1	94	55.163	ENSGAFG00000020694	urb1	93	55.163	Gambusia_affinis
ENSGMOG00000001838	urb1	94	60.686	ENSGACG00000011703	urb1	94	60.686	Gasterosteus_aculeatus
ENSGMOG00000001838	urb1	94	47.064	ENSGAGG00000022544	URB1	93	47.064	Gopherus_agassizii
ENSGMOG00000001838	urb1	94	47.586	ENSGGOG00000000285	URB1	93	47.668	Gorilla_gorilla
ENSGMOG00000001838	urb1	94	57.716	ENSHBUG00000001904	urb1	93	57.716	Haplochromis_burtoni
ENSGMOG00000001838	urb1	93	45.431	ENSHGLG00000004907	URB1	92	45.431	Heterocephalus_glaber_female
ENSGMOG00000001838	urb1	93	46.626	ENSHGLG00100010749	URB1	92	46.626	Heterocephalus_glaber_male
ENSGMOG00000001838	urb1	68	56.888	ENSHCOG00000018683	urb1	89	57.245	Hippocampus_comes
ENSGMOG00000001838	urb1	94	46.919	ENSIPUG00000014721	urb1	93	46.831	Ictalurus_punctatus
ENSGMOG00000001838	urb1	94	47.309	ENSSTOG00000004539	URB1	93	47.150	Ictidomys_tridecemlineatus
ENSGMOG00000001838	urb1	94	55.428	ENSKMAG00000006001	urb1	91	57.618	Kryptolebias_marmoratus
ENSGMOG00000001838	urb1	91	56.410	ENSLBEG00000027208	urb1	94	55.507	Labrus_bergylta
ENSGMOG00000001838	urb1	94	44.275	ENSLACG00000017059	URB1	93	44.190	Latimeria_chalumnae
ENSGMOG00000001838	urb1	94	52.997	ENSLOCG00000009190	urb1	93	52.997	Lepisosteus_oculatus
ENSGMOG00000001838	urb1	94	46.240	ENSLAFG00000010407	URB1	93	46.240	Loxodonta_africana
ENSGMOG00000001838	urb1	94	47.355	ENSMFAG00000034391	URB1	90	47.710	Macaca_fascicularis
ENSGMOG00000001838	urb1	94	47.441	ENSMMUG00000010295	URB1	93	47.710	Macaca_mulatta
ENSGMOG00000001838	urb1	94	46.487	ENSMNEG00000032981	URB1	93	46.759	Macaca_nemestrina
ENSGMOG00000001838	urb1	94	47.355	ENSMLEG00000041435	URB1	93	47.437	Mandrillus_leucophaeus
ENSGMOG00000001838	urb1	93	58.429	ENSMAMG00000011238	urb1	92	58.429	Mastacembelus_armatus
ENSGMOG00000001838	urb1	94	52.306	ENSMZEG00005011862	urb1	93	52.306	Maylandia_zebra
ENSGMOG00000001838	urb1	92	47.198	ENSMGAG00000014512	URB1	93	47.198	Meleagris_gallopavo
ENSGMOG00000001838	urb1	87	48.363	ENSMAUG00000010516	Urb1	92	48.363	Mesocricetus_auratus
ENSGMOG00000001838	urb1	93	46.469	ENSMICG00000016424	URB1	92	46.673	Microcebus_murinus
ENSGMOG00000001838	urb1	93	46.194	ENSMOCG00000012613	Urb1	92	46.194	Microtus_ochrogaster
ENSGMOG00000001838	urb1	93	46.986	ENSMODG00000021076	URB1	92	46.986	Monodelphis_domestica
ENSGMOG00000001838	urb1	94	56.430	ENSMALG00000017411	urb1	93	56.168	Monopterus_albus
ENSGMOG00000001838	urb1	91	46.567	MGP_CAROLIEiJ_G0020948	Urb1	90	46.567	Mus_caroli
ENSGMOG00000001838	urb1	91	46.661	ENSMUSG00000039929	Urb1	90	46.661	Mus_musculus
ENSGMOG00000001838	urb1	91	46.608	MGP_PahariEiJ_G0016653	Urb1	90	46.608	Mus_pahari
ENSGMOG00000001838	urb1	91	46.749	MGP_SPRETEiJ_G0021854	Urb1	90	46.749	Mus_spretus
ENSGMOG00000001838	urb1	93	47.594	ENSMPUG00000001123	URB1	92	47.765	Mustela_putorius_furo
ENSGMOG00000001838	urb1	93	46.394	ENSNGAG00000001905	Urb1	91	46.394	Nannospalax_galili
ENSGMOG00000001838	urb1	76	56.954	ENSNBRG00000001049	urb1	92	56.866	Neolamprologus_brichardi
ENSGMOG00000001838	urb1	93	45.242	ENSNLEG00000026872	URB1	93	45.352	Nomascus_leucogenys
ENSGMOG00000001838	urb1	84	46.856	ENSMEUG00000010828	URB1	86	42.171	Notamacropus_eugenii
ENSGMOG00000001838	urb1	94	44.118	ENSOPRG00000013482	URB1	93	44.291	Ochotona_princeps
ENSGMOG00000001838	urb1	93	48.249	ENSODEG00000002587	URB1	92	48.249	Octodon_degus
ENSGMOG00000001838	urb1	94	58.312	ENSONIG00000005599	urb1	93	58.275	Oreochromis_niloticus
ENSGMOG00000001838	urb1	93	47.695	ENSOCUG00000009381	URB1	92	47.644	Oryctolagus_cuniculus
ENSGMOG00000001838	urb1	94	57.218	ENSORLG00000003429	urb1	93	57.218	Oryzias_latipes
ENSGMOG00000001838	urb1	94	57.031	ENSORLG00020013785	urb1	94	56.343	Oryzias_latipes_hni
ENSGMOG00000001838	urb1	94	55.989	ENSORLG00015019421	urb1	92	61.708	Oryzias_latipes_hsok
ENSGMOG00000001838	urb1	74	56.287	ENSOMEG00000002094	urb1	93	56.287	Oryzias_melastigma
ENSGMOG00000001838	urb1	94	46.880	ENSOGAG00000017140	URB1	93	46.880	Otolemur_garnettii
ENSGMOG00000001838	urb1	93	45.431	ENSOARG00000013679	URB1	95	45.215	Ovis_aries
ENSGMOG00000001838	urb1	94	47.441	ENSPPAG00000003423	URB1	93	47.524	Pan_paniscus
ENSGMOG00000001838	urb1	93	47.230	ENSPPRG00000023131	URB1	92	47.581	Panthera_pardus
ENSGMOG00000001838	urb1	82	46.223	ENSPTIG00000016125	URB1	86	46.751	Panthera_tigris_altaica
ENSGMOG00000001838	urb1	94	47.268	ENSPTRG00000013852	URB1	93	47.350	Pan_troglodytes
ENSGMOG00000001838	urb1	94	47.441	ENSPANG00000021964	URB1	93	47.710	Papio_anubis
ENSGMOG00000001838	urb1	94	54.426	ENSPKIG00000003683	urb1	92	54.426	Paramormyrops_kingsleyae
ENSGMOG00000001838	urb1	91	46.643	ENSPEMG00000021205	Urb1	90	46.643	Peromyscus_maniculatus_bairdii
ENSGMOG00000001838	urb1	65	35.902	ENSPMAG00000009733	URB1	88	36.014	Petromyzon_marinus
ENSGMOG00000001838	urb1	92	46.726	ENSPCIG00000016350	URB1	92	46.750	Phascolarctos_cinereus
ENSGMOG00000001838	urb1	92	56.227	ENSPLAG00000004371	urb1	94	56.227	Poecilia_latipinna
ENSGMOG00000001838	urb1	94	57.380	ENSPMEG00000006634	urb1	93	57.380	Poecilia_mexicana
ENSGMOG00000001838	urb1	94	56.894	ENSPREG00000013453	urb1	93	56.894	Poecilia_reticulata
ENSGMOG00000001838	urb1	93	47.237	ENSPPYG00000011359	URB1	93	47.405	Pongo_abelii
ENSGMOG00000001838	urb1	94	42.771	ENSPCAG00000007430	URB1	88	47.680	Procavia_capensis
ENSGMOG00000001838	urb1	93	47.064	ENSPCOG00000022695	URB1	93	47.064	Propithecus_coquereli
ENSGMOG00000001838	urb1	93	46.454	ENSPVAG00000000889	URB1	92	46.318	Pteropus_vampyrus
ENSGMOG00000001838	urb1	94	56.927	ENSPNYG00000010589	urb1	93	56.927	Pundamilia_nyererei
ENSGMOG00000001838	urb1	94	46.859	ENSPNAG00000019324	urb1	93	46.946	Pygocentrus_nattereri
ENSGMOG00000001838	urb1	91	46.479	ENSRNOG00000002080	Urb1	90	46.479	Rattus_norvegicus
ENSGMOG00000001838	urb1	94	47.095	ENSRBIG00000033122	URB1	93	47.176	Rhinopithecus_bieti
ENSGMOG00000001838	urb1	94	47.095	ENSRROG00000040237	URB1	93	47.176	Rhinopithecus_roxellana
ENSGMOG00000001838	urb1	93	47.826	ENSSBOG00000027672	URB1	92	48.000	Saimiri_boliviensis_boliviensis
ENSGMOG00000001838	urb1	93	46.596	ENSSHAG00000005140	URB1	92	46.501	Sarcophilus_harrisii
ENSGMOG00000001838	urb1	86	54.538	ENSSFOG00015000339	urb1	92	54.656	Scleropages_formosus
ENSGMOG00000001838	urb1	94	59.774	ENSSMAG00000003782	urb1	94	59.774	Scophthalmus_maximus
ENSGMOG00000001838	urb1	94	61.082	ENSSDUG00000012313	urb1	93	61.082	Seriola_dumerili
ENSGMOG00000001838	urb1	94	60.995	ENSSLDG00000023179	urb1	93	60.995	Seriola_lalandi_dorsalis
ENSGMOG00000001838	urb1	94	47.890	ENSSPUG00000012447	URB1	93	47.804	Sphenodon_punctatus
ENSGMOG00000001838	urb1	94	59.370	ENSSPAG00000006325	urb1	93	59.545	Stegastes_partitus
ENSGMOG00000001838	urb1	93	47.569	ENSSSCG00000032024	URB1	92	47.830	Sus_scrofa
ENSGMOG00000001838	urb1	68	46.673	ENSTGUG00000013442	URB1	92	46.673	Taeniopygia_guttata
ENSGMOG00000001838	urb1	94	56.503	ENSTRUG00000009372	urb1	93	56.503	Takifugu_rubripes
ENSGMOG00000001838	urb1	94	56.119	ENSTNIG00000016277	urb1	94	56.119	Tetraodon_nigroviridis
ENSGMOG00000001838	urb1	76	48.529	ENSTBEG00000010044	URB1	74	48.529	Tupaia_belangeri
ENSGMOG00000001838	urb1	83	48.468	ENSTTRG00000007712	URB1	84	48.468	Tursiops_truncatus
ENSGMOG00000001838	urb1	93	47.745	ENSUAMG00000012231	URB1	92	47.745	Ursus_americanus
ENSGMOG00000001838	urb1	82	47.873	ENSUMAG00000017419	URB1	88	47.161	Ursus_maritimus
ENSGMOG00000001838	urb1	59	56.944	ENSVPAG00000001164	URB1	58	56.944	Vicugna_pacos
ENSGMOG00000001838	urb1	93	47.126	ENSVVUG00000000551	URB1	92	47.126	Vulpes_vulpes
ENSGMOG00000001838	urb1	93	46.886	ENSXETG00000009895	urb1	93	46.518	Xenopus_tropicalis
ENSGMOG00000001838	urb1	90	56.190	ENSXCOG00000005500	urb1	92	55.263	Xiphophorus_couchianus
ENSGMOG00000001838	urb1	90	56.453	ENSXMAG00000007253	urb1	91	56.453	Xiphophorus_maculatus