EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000001841 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 6430 bases
Position: chrGeneScaffold_2152:75338-81767
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000001956	RIO1	PF01163.22	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000002019	-	738	-	ENSGMOP00000001956	246 (aa)	-	UPI00023EFF14

Gene Model

Click here to download ENSGMOG00000001841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000001841's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000001841	-	99	37.154	ENSGMOG00000015028	HUNK	65	37.154
ENSGMOG00000001841	-	54	34.328	ENSGMOG00000000191	-	64	34.328
ENSGMOG00000001841	-	79	38.384	ENSGMOG00000017452	-	74	38.384
ENSGMOG00000001841	-	93	30.213	ENSGMOG00000009894	-	58	30.213
ENSGMOG00000001841	-	100	91.057	ENSGMOG00000016883	camk1a	72	91.057
ENSGMOG00000001841	-	75	31.050	ENSGMOG00000018813	eif2ak2	55	31.050
ENSGMOG00000001841	-	99	35.484	ENSGMOG00000009000	nuak1b	66	35.484
ENSGMOG00000001841	-	99	40.239	ENSGMOG00000012530	dapk3	55	40.239

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000001841	-	100	94.309	ENSCSEG00000004982	camk1b	69	94.309	Cynoglossus_semilaevis
ENSGMOG00000001841	-	100	97.154	ENSELUG00000008588	camk1b	65	97.154	Esox_lucius
ENSGMOG00000001841	-	100	95.122	ENSPNAG00000002527	camk1b	61	95.122	Pygocentrus_nattereri
ENSGMOG00000001841	-	100	93.089	ENSSFOG00015021178	camk1a	67	93.089	Scleropages_formosus
ENSGMOG00000001841	-	100	96.341	ENSSFOG00015019005	camk1	70	96.341	Scleropages_formosus
ENSGMOG00000001841	-	100	92.276	ENSXETG00000023672	camk1	64	92.276	Xenopus_tropicalis