EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000001876 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 3814 bases
Position: chrGeneScaffold_1369:6137-9950
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000001989	MMR_HSR1	PF01926.23	4.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000002054	-	519	-	ENSGMOP00000001989	173 (aa)	-	UPI00023EFA5E

Gene Model

Click here to download ENSGMOG00000001876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000001876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000001876	-	90	32.704	ENSGMOG00000007140	rab34b	77	32.704
ENSGMOG00000001876	-	91	32.075	ENSGMOG00000010581	kras	82	32.075
ENSGMOG00000001876	-	89	43.871	ENSGMOG00000016608	rab18b	75	43.871
ENSGMOG00000001876	-	99	82.558	ENSGMOG00000007127	RAB5A	94	82.558
ENSGMOG00000001876	-	88	37.500	ENSGMOG00000019073	-	73	37.500
ENSGMOG00000001876	-	92	47.170	ENSGMOG00000006444	rab25b	94	47.170
ENSGMOG00000001876	-	91	41.358	ENSGMOG00000007712	RAB7A	77	41.358
ENSGMOG00000001876	-	92	44.025	ENSGMOG00000002552	rab30	78	44.025
ENSGMOG00000001876	-	91	44.586	ENSGMOG00000001834	rab4b	75	44.586
ENSGMOG00000001876	-	90	34.839	ENSGMOG00000018928	rabl2	77	34.839
ENSGMOG00000001876	-	82	35.211	ENSGMOG00000005102	rab23	65	36.364
ENSGMOG00000001876	-	92	46.541	ENSGMOG00000004888	rab1ab	80	46.541
ENSGMOG00000001876	-	91	38.272	ENSGMOG00000006175	rab33a	69	38.272
ENSGMOG00000001876	-	98	83.432	ENSGMOG00000002868	rab5aa	78	83.432
ENSGMOG00000001876	-	88	31.818	ENSGMOG00000012401	rheb	83	31.818
ENSGMOG00000001876	-	90	32.704	ENSGMOG00000016238	rab34a	60	32.704
ENSGMOG00000001876	-	89	35.897	ENSGMOG00000017644	si:ch211-247i17.1	89	35.897
ENSGMOG00000001876	-	88	43.137	ENSGMOG00000016277	RAB15	72	43.137
ENSGMOG00000001876	-	92	42.767	ENSGMOG00000017688	rab35b	79	42.767
ENSGMOG00000001876	-	91	41.358	ENSGMOG00000011308	-	78	41.358
ENSGMOG00000001876	-	96	36.527	ENSGMOG00000015174	si:dkey-16l2.16	100	36.527
ENSGMOG00000001876	-	92	45.912	ENSGMOG00000007293	rab1ba	78	45.912
ENSGMOG00000001876	-	92	47.799	ENSGMOG00000008355	rab11a	73	47.799
ENSGMOG00000001876	-	90	37.975	ENSGMOG00000006968	-	79	37.975
ENSGMOG00000001876	-	91	37.500	ENSGMOG00000008450	-	74	37.500
ENSGMOG00000001876	-	93	30.864	ENSGMOG00000010196	hrasb	86	30.864
ENSGMOG00000001876	-	92	49.693	ENSGMOG00000003577	-	82	49.693
ENSGMOG00000001876	-	92	41.509	ENSGMOG00000004979	-	74	41.509
ENSGMOG00000001876	-	89	46.753	ENSGMOG00000006450	rab11al	76	46.753
ENSGMOG00000001876	-	92	46.541	ENSGMOG00000007390	rab11ba	73	46.541
ENSGMOG00000001876	-	89	40.260	ENSGMOG00000003610	rab15	72	40.260
ENSGMOG00000001876	-	88	40.789	ENSGMOG00000018741	-	72	40.789
ENSGMOG00000001876	-	92	46.951	ENSGMOG00000004096	-	75	46.951
ENSGMOG00000001876	-	92	37.654	ENSGMOG00000010808	RAB39B	76	37.654
ENSGMOG00000001876	-	92	46.541	ENSGMOG00000009668	-	73	46.541
ENSGMOG00000001876	-	90	41.935	ENSGMOG00000011766	-	99	41.935
ENSGMOG00000001876	-	94	35.882	ENSGMOG00000020194	rab9b	82	35.882
ENSGMOG00000001876	-	90	35.000	ENSGMOG00000014481	rab36	84	35.000
ENSGMOG00000001876	-	99	38.764	ENSGMOG00000012335	rab12	76	37.989
ENSGMOG00000001876	-	89	32.298	ENSGMOG00000018475	RAB29	96	32.298
ENSGMOG00000001876	-	94	40.741	ENSGMOG00000004095	rab41	77	40.741
ENSGMOG00000001876	-	91	38.272	ENSGMOG00000011665	zgc:101559	77	38.272
ENSGMOG00000001876	-	98	37.079	ENSGMOG00000000885	rab33ba	84	37.079
ENSGMOG00000001876	-	91	55.696	ENSGMOG00000013070	rab22a	81	55.696
ENSGMOG00000001876	-	97	88.690	ENSGMOG00000015096	rab5c	76	88.690
ENSGMOG00000001876	-	94	34.503	ENSGMOG00000020144	rab9a	82	34.503
ENSGMOG00000001876	-	89	36.420	ENSGMOG00000020148	-	83	36.420
ENSGMOG00000001876	-	92	45.732	ENSGMOG00000010022	-	78	45.732
ENSGMOG00000001876	-	92	41.875	ENSGMOG00000000532	-	74	41.875
ENSGMOG00000001876	-	92	48.428	ENSGMOG00000009211	rab11bb	73	48.428

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000001876	-	99	87.209	ENSG00000108774	RAB5C	95	88.983	Homo_sapiens
ENSGMOG00000001876	-	97	88.690	ENSAPOG00000016864	rab5c	76	88.690	Acanthochromis_polyacanthus
ENSGMOG00000001876	-	98	88.166	ENSAMEG00000006003	RAB5C	78	88.166	Ailuropoda_melanoleuca
ENSGMOG00000001876	-	97	87.500	ENSACIG00000010896	rab5c	78	87.500	Amphilophus_citrinellus
ENSGMOG00000001876	-	97	88.690	ENSAOCG00000016614	rab5c	76	88.690	Amphiprion_ocellaris
ENSGMOG00000001876	-	97	88.690	ENSAPEG00000017868	-	77	88.690	Amphiprion_percula
ENSGMOG00000001876	-	97	88.690	ENSATEG00000001937	rab5c	77	88.690	Anabas_testudineus
ENSGMOG00000001876	-	99	86.628	ENSANAG00000025390	RAB5C	84	86.628	Aotus_nancymaae
ENSGMOG00000001876	-	98	87.574	ENSACLG00000008615	-	76	87.574	Astatotilapia_calliptera
ENSGMOG00000001876	-	97	87.500	ENSACLG00000002706	rab5c	76	87.500	Astatotilapia_calliptera
ENSGMOG00000001876	-	97	89.286	ENSAMXG00000043717	rab5c	76	89.286	Astyanax_mexicanus
ENSGMOG00000001876	-	100	86.127	ENSAMXG00000037267	-	82	86.127	Astyanax_mexicanus
ENSGMOG00000001876	-	98	87.574	ENSBTAG00000006982	RAB5C	78	87.574	Bos_taurus
ENSGMOG00000001876	-	95	80.000	WBGene00004268	rab-5	79	80.000	Caenorhabditis_elegans
ENSGMOG00000001876	-	98	88.166	ENSCAFG00000015629	RAB5C	78	88.166	Canis_familiaris
ENSGMOG00000001876	-	98	88.166	ENSCAFG00020013537	RAB5C	78	88.166	Canis_lupus_dingo
ENSGMOG00000001876	-	98	87.574	ENSCHIG00000012960	RAB5C	78	87.574	Capra_hircus
ENSGMOG00000001876	-	98	88.166	ENSTSYG00000030531	RAB5C	78	88.166	Carlito_syrichta
ENSGMOG00000001876	-	98	87.574	ENSCCAG00000025940	RAB5C	78	87.574	Cebus_capucinus
ENSGMOG00000001876	-	99	87.209	ENSCATG00000040873	RAB5C	80	87.209	Cercocebus_atys
ENSGMOG00000001876	-	98	87.574	ENSCLAG00000016650	RAB5C	78	87.574	Chinchilla_lanigera
ENSGMOG00000001876	-	99	87.209	ENSCHOG00000009886	RAB5C	97	87.209	Choloepus_hoffmanni
ENSGMOG00000001876	-	99	81.977	ENSCING00000003340	-	79	81.977	Ciona_intestinalis
ENSGMOG00000001876	-	100	80.899	ENSCSAVG00000000613	-	100	80.982	Ciona_savignyi
ENSGMOG00000001876	-	99	87.209	ENSCGRG00001014226	Rab5c	80	87.209	Cricetulus_griseus_chok1gshd
ENSGMOG00000001876	-	99	87.209	ENSCGRG00000007534	Rab5c	80	87.209	Cricetulus_griseus_crigri
ENSGMOG00000001876	-	97	89.286	ENSCSEG00000017024	rab5c	76	89.286	Cynoglossus_semilaevis
ENSGMOG00000001876	-	97	88.095	ENSCVAG00000009550	rab5c	76	88.095	Cyprinodon_variegatus
ENSGMOG00000001876	-	99	86.628	ENSDNOG00000038853	RAB5C	85	86.628	Dasypus_novemcinctus
ENSGMOG00000001876	-	98	88.166	ENSDORG00000006819	Rab5c	78	88.166	Dipodomys_ordii
ENSGMOG00000001876	-	99	78.488	FBgn0014010	Rab5	78	78.488	Drosophila_melanogaster
ENSGMOG00000001876	-	98	82.840	ENSEBUG00000014794	rab5c	80	82.840	Eptatretus_burgeri
ENSGMOG00000001876	-	98	88.166	ENSEASG00005009281	RAB5C	78	88.166	Equus_asinus_asinus
ENSGMOG00000001876	-	98	88.166	ENSECAG00000025054	RAB5C	78	88.166	Equus_caballus
ENSGMOG00000001876	-	98	87.574	ENSEEUG00000002790	RAB5C	78	87.574	Erinaceus_europaeus
ENSGMOG00000001876	-	97	88.095	ENSELUG00000018516	rab5c	77	88.095	Esox_lucius
ENSGMOG00000001876	-	97	88.095	ENSELUG00000010439	-	76	88.095	Esox_lucius
ENSGMOG00000001876	-	98	87.574	ENSFCAG00000002148	RAB5C	78	87.574	Felis_catus
ENSGMOG00000001876	-	99	86.047	ENSFDAG00000021541	RAB5C	80	86.047	Fukomys_damarensis
ENSGMOG00000001876	-	98	88.166	ENSFHEG00000015268	-	77	88.166	Fundulus_heteroclitus
ENSGMOG00000001876	-	97	88.095	ENSFHEG00000012117	rab5c	76	88.095	Fundulus_heteroclitus
ENSGMOG00000001876	-	98	88.757	ENSGAFG00000003642	-	76	88.757	Gambusia_affinis
ENSGMOG00000001876	-	97	88.095	ENSGAFG00000000884	rab5c	76	88.095	Gambusia_affinis
ENSGMOG00000001876	-	97	88.690	ENSGACG00000008659	rab5c	76	88.690	Gasterosteus_aculeatus
ENSGMOG00000001876	-	99	87.209	ENSGGOG00000005472	RAB5C	80	87.209	Gorilla_gorilla
ENSGMOG00000001876	-	97	87.500	ENSHBUG00000002014	rab5c	76	87.500	Haplochromis_burtoni
ENSGMOG00000001876	-	98	87.574	ENSHBUG00000006823	-	76	87.574	Haplochromis_burtoni
ENSGMOG00000001876	-	98	86.391	ENSHGLG00000012067	RAB5C	78	86.391	Heterocephalus_glaber_female
ENSGMOG00000001876	-	94	88.272	ENSHCOG00000020238	-	77	86.310	Hippocampus_comes
ENSGMOG00000001876	-	97	88.690	ENSHCOG00000004662	rab5c	75	88.690	Hippocampus_comes
ENSGMOG00000001876	-	93	90.062	ENSIPUG00000020082	rab5c	77	88.344	Ictalurus_punctatus
ENSGMOG00000001876	-	98	88.166	ENSSTOG00000006620	RAB5C	78	88.166	Ictidomys_tridecemlineatus
ENSGMOG00000001876	-	99	87.209	ENSJJAG00000021181	Rab5c	80	87.209	Jaculus_jaculus
ENSGMOG00000001876	-	98	88.757	ENSKMAG00000017417	-	77	88.757	Kryptolebias_marmoratus
ENSGMOG00000001876	-	97	88.690	ENSKMAG00000020038	rab5c	76	88.690	Kryptolebias_marmoratus
ENSGMOG00000001876	-	97	88.095	ENSLBEG00000004128	rab5c	76	88.095	Labrus_bergylta
ENSGMOG00000001876	-	98	87.574	ENSLBEG00000010408	-	77	87.574	Labrus_bergylta
ENSGMOG00000001876	-	99	86.705	ENSLOCG00000012566	rab5c	81	86.705	Lepisosteus_oculatus
ENSGMOG00000001876	-	99	87.209	ENSMFAG00000039627	RAB5C	80	87.209	Macaca_fascicularis
ENSGMOG00000001876	-	99	87.209	ENSMNEG00000000355	RAB5C	80	87.209	Macaca_nemestrina
ENSGMOG00000001876	-	99	86.127	ENSMAMG00000016207	-	79	86.127	Mastacembelus_armatus
ENSGMOG00000001876	-	99	87.283	ENSMAMG00000022322	rab5c	79	87.283	Mastacembelus_armatus
ENSGMOG00000001876	-	98	87.574	ENSMZEG00005021090	-	76	87.574	Maylandia_zebra
ENSGMOG00000001876	-	97	87.500	ENSMZEG00005022735	rab5c	76	87.500	Maylandia_zebra
ENSGMOG00000001876	-	98	88.166	ENSMAUG00000015005	Rab5c	78	88.166	Mesocricetus_auratus
ENSGMOG00000001876	-	98	88.166	ENSMICG00000041608	RAB5C	78	88.166	Microcebus_murinus
ENSGMOG00000001876	-	98	88.166	ENSMOCG00000018531	-	78	88.166	Microtus_ochrogaster
ENSGMOG00000001876	-	97	88.095	ENSMMOG00000020621	rab5c	76	88.095	Mola_mola
ENSGMOG00000001876	-	98	86.982	ENSMALG00000022348	-	77	86.982	Monopterus_albus
ENSGMOG00000001876	-	97	85.207	ENSMALG00000006052	rab5c	77	84.483	Monopterus_albus
ENSGMOG00000001876	-	98	88.166	MGP_CAROLIEiJ_G0017184	Rab5c	78	88.166	Mus_caroli
ENSGMOG00000001876	-	98	88.166	ENSMUSG00000019173	Rab5c	78	88.166	Mus_musculus
ENSGMOG00000001876	-	98	88.166	MGP_PahariEiJ_G0018314	Rab5c	78	88.166	Mus_pahari
ENSGMOG00000001876	-	98	88.166	MGP_SPRETEiJ_G0018027	Rab5c	78	88.166	Mus_spretus
ENSGMOG00000001876	-	98	88.166	ENSMPUG00000010554	RAB5C	78	88.166	Mustela_putorius_furo
ENSGMOG00000001876	-	98	87.574	ENSNGAG00000010286	Rab5c	78	87.574	Nannospalax_galili
ENSGMOG00000001876	-	98	87.574	ENSNBRG00000016922	-	76	87.574	Neolamprologus_brichardi
ENSGMOG00000001876	-	97	87.500	ENSNBRG00000018165	rab5c	76	87.500	Neolamprologus_brichardi
ENSGMOG00000001876	-	99	80.814	ENSOPRG00000008255	RAB5C	97	80.814	Ochotona_princeps
ENSGMOG00000001876	-	98	86.982	ENSODEG00000017920	RAB5C	78	86.982	Octodon_degus
ENSGMOG00000001876	-	97	87.500	ENSONIG00000001113	rab5c	76	87.500	Oreochromis_niloticus
ENSGMOG00000001876	-	97	87.500	ENSORLG00000003882	rab5c	77	87.500	Oryzias_latipes
ENSGMOG00000001876	-	97	87.500	ENSORLG00020008388	rab5c	77	87.500	Oryzias_latipes_hni
ENSGMOG00000001876	-	97	87.500	ENSORLG00015021900	rab5c	77	87.500	Oryzias_latipes_hsok
ENSGMOG00000001876	-	97	87.500	ENSOMEG00000023078	rab5c	77	87.500	Oryzias_melastigma
ENSGMOG00000001876	-	98	88.166	ENSOGAG00000009456	RAB5C	78	88.166	Otolemur_garnettii
ENSGMOG00000001876	-	98	87.574	ENSOARG00000018768	RAB5C	78	87.574	Ovis_aries
ENSGMOG00000001876	-	99	87.209	ENSPPAG00000037206	RAB5C	80	87.209	Pan_paniscus
ENSGMOG00000001876	-	98	87.574	ENSPPRG00000005745	RAB5C	78	87.574	Panthera_pardus
ENSGMOG00000001876	-	98	87.574	ENSPTIG00000008177	RAB5C	78	87.574	Panthera_tigris_altaica
ENSGMOG00000001876	-	99	87.209	ENSPTRG00000009194	RAB5C	80	87.209	Pan_troglodytes
ENSGMOG00000001876	-	99	85.465	ENSPKIG00000001237	-	77	85.465	Paramormyrops_kingsleyae
ENSGMOG00000001876	-	97	89.286	ENSPKIG00000020112	-	77	89.286	Paramormyrops_kingsleyae
ENSGMOG00000001876	-	94	89.506	ENSPMGG00000010792	rab5c	75	89.506	Periophthalmus_magnuspinnatus
ENSGMOG00000001876	-	98	88.166	ENSPEMG00000017971	Rab5c	78	88.166	Peromyscus_maniculatus_bairdii
ENSGMOG00000001876	-	100	79.769	ENSPMAG00000001399	rab5c	82	79.769	Petromyzon_marinus
ENSGMOG00000001876	-	97	85.119	ENSPMAG00000000008	rab5c	77	85.119	Petromyzon_marinus
ENSGMOG00000001876	-	99	81.395	ENSPMAG00000007867	rab5c	82	81.395	Petromyzon_marinus
ENSGMOG00000001876	-	100	86.127	ENSPCIG00000020225	-	80	86.127	Phascolarctos_cinereus
ENSGMOG00000001876	-	98	88.166	ENSPLAG00000016333	-	78	88.166	Poecilia_latipinna
ENSGMOG00000001876	-	97	88.095	ENSPLAG00000004790	rab5c	76	88.095	Poecilia_latipinna
ENSGMOG00000001876	-	97	88.095	ENSPMEG00000011336	rab5c	76	88.095	Poecilia_mexicana
ENSGMOG00000001876	-	98	88.757	ENSPMEG00000012614	-	76	88.757	Poecilia_mexicana
ENSGMOG00000001876	-	97	88.095	ENSPREG00000010146	rab5c	76	88.095	Poecilia_reticulata
ENSGMOG00000001876	-	99	87.791	ENSPREG00000022167	-	86	88.623	Poecilia_reticulata
ENSGMOG00000001876	-	99	87.209	ENSPPYG00000008398	RAB5C	80	87.209	Pongo_abelii
ENSGMOG00000001876	-	98	86.982	ENSPCAG00000016412	RAB5C	79	86.982	Procavia_capensis
ENSGMOG00000001876	-	99	86.628	ENSPCOG00000026327	RAB5C	80	86.628	Propithecus_coquereli
ENSGMOG00000001876	-	98	88.166	ENSPVAG00000003867	RAB5C	78	88.166	Pteropus_vampyrus
ENSGMOG00000001876	-	98	87.574	ENSPNYG00000015851	-	76	87.574	Pundamilia_nyererei
ENSGMOG00000001876	-	97	87.500	ENSPNYG00000010615	rab5c	76	87.500	Pundamilia_nyererei
ENSGMOG00000001876	-	97	88.690	ENSPNAG00000028138	rab5c	76	88.690	Pygocentrus_nattereri
ENSGMOG00000001876	-	100	84.971	ENSPNAG00000002218	-	81	84.971	Pygocentrus_nattereri
ENSGMOG00000001876	-	98	88.166	ENSRNOG00000018568	Rab5c	78	88.166	Rattus_norvegicus
ENSGMOG00000001876	-	99	87.209	ENSRBIG00000031376	RAB5C	80	87.209	Rhinopithecus_bieti
ENSGMOG00000001876	-	99	87.209	ENSRROG00000032895	RAB5C	80	87.209	Rhinopithecus_roxellana
ENSGMOG00000001876	-	98	87.574	ENSSBOG00000032552	-	78	87.574	Saimiri_boliviensis_boliviensis
ENSGMOG00000001876	-	98	87.574	ENSSHAG00000005267	-	78	87.574	Sarcophilus_harrisii
ENSGMOG00000001876	-	97	84.524	ENSSFOG00015009988	-	76	84.524	Scleropages_formosus
ENSGMOG00000001876	-	97	88.690	ENSSMAG00000007323	rab5c	76	88.690	Scophthalmus_maximus
ENSGMOG00000001876	-	97	88.690	ENSSDUG00000023008	rab5c	76	88.690	Seriola_dumerili
ENSGMOG00000001876	-	97	88.095	ENSSLDG00000017771	rab5c	76	88.095	Seriola_lalandi_dorsalis
ENSGMOG00000001876	-	99	86.628	ENSSPUG00000012950	-	80	86.628	Sphenodon_punctatus
ENSGMOG00000001876	-	97	88.690	ENSSPAG00000006436	rab5c	76	88.690	Stegastes_partitus
ENSGMOG00000001876	-	98	87.574	ENSSSCG00000032467	RAB5C	78	87.574	Sus_scrofa
ENSGMOG00000001876	-	97	88.690	ENSTRUG00000015590	rab5c	76	88.690	Takifugu_rubripes
ENSGMOG00000001876	-	97	89.286	ENSTNIG00000011711	rab5c	76	89.286	Tetraodon_nigroviridis
ENSGMOG00000001876	-	98	88.166	ENSTBEG00000007092	RAB5C	78	88.166	Tupaia_belangeri
ENSGMOG00000001876	-	99	86.628	ENSTTRG00000006673	RAB5C	80	86.628	Tursiops_truncatus
ENSGMOG00000001876	-	98	88.166	ENSUAMG00000024343	RAB5C	78	88.166	Ursus_americanus
ENSGMOG00000001876	-	98	88.166	ENSUMAG00000023270	RAB5C	78	88.166	Ursus_maritimus
ENSGMOG00000001876	-	98	88.166	ENSXCOG00000006300	-	76	88.166	Xiphophorus_couchianus
ENSGMOG00000001876	-	100	86.127	ENSXCOG00000016788	rab5c	80	86.127	Xiphophorus_couchianus
ENSGMOG00000001876	-	98	88.166	ENSXMAG00000022179	-	78	88.166	Xiphophorus_maculatus
ENSGMOG00000001876	-	97	88.095	ENSXMAG00000003266	rab5c	76	88.095	Xiphophorus_maculatus