EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000001953 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 21057 bases
Position: chrGeneScaffold_3148:2424-23480
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000002099	Nop52	PF05997.12	2.7e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000002166	-	1803	-	ENSGMOP00000002099	601 (aa)	-	UPI00023EFBD3

Gene Model

Click here to download ENSGMOG00000001953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000001953's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000001953	-	67	49.091	ENSG00000160208	RRP1B	62	49.091	Homo_sapiens
ENSGMOG00000001953	-	71	66.571	ENSAPOG00000007490	-	57	67.143	Acanthochromis_polyacanthus
ENSGMOG00000001953	-	68	45.455	ENSAMEG00000011401	RRP1B	64	45.872	Ailuropoda_melanoleuca
ENSGMOG00000001953	-	54	43.817	ENSAMEG00000011448	RRP1	78	44.944	Ailuropoda_melanoleuca
ENSGMOG00000001953	-	66	66.382	ENSAOCG00000017894	-	97	67.236	Amphiprion_ocellaris
ENSGMOG00000001953	-	71	66.382	ENSAPEG00000024150	-	57	66.952	Amphiprion_percula
ENSGMOG00000001953	-	69	76.471	ENSATEG00000005045	-	55	63.061	Anabas_testudineus
ENSGMOG00000001953	-	62	47.273	ENSAPLG00000004310	RRP1B	60	47.273	Anas_platyrhynchos
ENSGMOG00000001953	-	68	52.212	ENSACAG00000017851	RRP1B	63	50.559	Anolis_carolinensis
ENSGMOG00000001953	-	69	45.455	ENSANAG00000034889	RRP1B	62	45.455	Aotus_nancymaae
ENSGMOG00000001953	-	68	48.598	ENSBTAG00000017418	RRP1B	62	48.598	Bos_taurus
ENSGMOG00000001953	-	54	43.014	ENSBTAG00000003981	RRP1	78	44.476	Bos_taurus
ENSGMOG00000001953	-	68	46.364	ENSCJAG00000017077	RRP1B	62	46.364	Callithrix_jacchus
ENSGMOG00000001953	-	51	53.478	ENSCAFG00000010646	RRP1	75	46.313	Canis_familiaris
ENSGMOG00000001953	-	63	45.872	ENSCAFG00000010621	RRP1B	61	45.872	Canis_familiaris
ENSGMOG00000001953	-	54	44.444	ENSCAFG00020018979	RRP1	75	46.313	Canis_lupus_dingo
ENSGMOG00000001953	-	69	47.706	ENSCAFG00020018901	RRP1B	65	47.706	Canis_lupus_dingo
ENSGMOG00000001953	-	69	48.598	ENSCHIG00000021519	RRP1B	62	48.598	Capra_hircus
ENSGMOG00000001953	-	54	41.823	ENSCHIG00000020948	RRP1	79	43.137	Capra_hircus
ENSGMOG00000001953	-	66	49.515	ENSCPOG00000002396	RRP1B	65	51.456	Cavia_porcellus
ENSGMOG00000001953	-	67	46.364	ENSCCAG00000029384	RRP1B	62	46.364	Cebus_capucinus
ENSGMOG00000001953	-	67	47.273	ENSCATG00000017423	RRP1B	62	47.273	Cercocebus_atys
ENSGMOG00000001953	-	66	50.450	ENSCLAG00000005622	RRP1B	67	50.450	Chinchilla_lanigera
ENSGMOG00000001953	-	67	48.182	ENSCSAG00000007961	RRP1B	62	48.182	Chlorocebus_sabaeus
ENSGMOG00000001953	-	66	51.818	ENSCPBG00000010310	RRP1B	60	51.818	Chrysemys_picta_bellii
ENSGMOG00000001953	-	51	41.195	ENSCING00000003304	-	75	42.122	Ciona_intestinalis
ENSGMOG00000001953	-	67	48.182	ENSCANG00000040952	RRP1B	62	48.182	Colobus_angolensis_palliatus
ENSGMOG00000001953	-	69	44.954	ENSCGRG00001010889	-	63	44.954	Cricetulus_griseus_chok1gshd
ENSGMOG00000001953	-	69	44.954	ENSCGRG00001023882	-	60	61.765	Cricetulus_griseus_chok1gshd
ENSGMOG00000001953	-	64	44.954	ENSCGRG00000001553	Rrp1b	59	44.954	Cricetulus_griseus_crigri
ENSGMOG00000001953	-	67	60.695	ENSCSEG00000020711	-	80	61.708	Cynoglossus_semilaevis
ENSGMOG00000001953	-	53	60.278	ENSCVAG00000017568	-	92	59.722	Cyprinodon_variegatus
ENSGMOG00000001953	-	65	56.667	ENSDARG00000103337	rrp1	62	57.143	Danio_rerio
ENSGMOG00000001953	-	68	49.107	ENSDNOG00000032774	RRP1B	63	49.107	Dasypus_novemcinctus
ENSGMOG00000001953	-	53	45.455	ENSDORG00000005496	Rrp1b	56	45.455	Dipodomys_ordii
ENSGMOG00000001953	-	62	55.952	ENSETEG00000019489	RRP1B	58	55.952	Echinops_telfairi
ENSGMOG00000001953	-	69	44.954	ENSEASG00005001687	RRP1B	62	44.954	Equus_asinus_asinus
ENSGMOG00000001953	-	69	44.954	ENSECAG00000018018	RRP1B	62	44.954	Equus_caballus
ENSGMOG00000001953	-	54	43.666	ENSECAG00000015703	RRP1	77	46.765	Equus_caballus
ENSGMOG00000001953	-	68	71.486	ENSELUG00000015885	-	94	57.396	Esox_lucius
ENSGMOG00000001953	-	69	46.364	ENSFCAG00000010272	RRP1B	64	46.364	Felis_catus
ENSGMOG00000001953	-	54	44.199	ENSFCAG00000008434	RRP1	78	45.977	Felis_catus
ENSGMOG00000001953	-	56	47.826	ENSFALG00000002024	RRP1B	60	47.826	Ficedula_albicollis
ENSGMOG00000001953	-	63	47.273	ENSFDAG00000010899	RRP1B	60	47.273	Fukomys_damarensis
ENSGMOG00000001953	-	68	60.651	ENSFHEG00000016314	-	59	60.725	Fundulus_heteroclitus
ENSGMOG00000001953	-	68	52.688	ENSGALG00000035696	RRP1B	60	52.688	Gallus_gallus
ENSGMOG00000001953	-	70	75.000	ENSGACG00000001438	rrp1	71	75.000	Gasterosteus_aculeatus
ENSGMOG00000001953	-	67	51.818	ENSGAGG00000000375	RRP1B	62	51.818	Gopherus_agassizii
ENSGMOG00000001953	-	67	49.091	ENSGGOG00000012069	RRP1B	62	49.091	Gorilla_gorilla
ENSGMOG00000001953	-	67	50.943	ENSHGLG00000004968	RRP1B	64	50.943	Heterocephalus_glaber_female
ENSGMOG00000001953	-	57	50.943	ENSHGLG00100002232	RRP1B	55	50.943	Heterocephalus_glaber_male
ENSGMOG00000001953	-	73	55.501	ENSHCOG00000018388	-	66	55.831	Hippocampus_comes
ENSGMOG00000001953	-	62	65.021	ENSIPUG00000000673	-	72	51.070	Ictalurus_punctatus
ENSGMOG00000001953	-	64	44.037	ENSSTOG00000011790	RRP1B	62	44.037	Ictidomys_tridecemlineatus
ENSGMOG00000001953	-	60	50.467	ENSJJAG00000021279	Rrp1b	60	50.467	Jaculus_jaculus
ENSGMOG00000001953	-	73	57.881	ENSKMAG00000005539	rrp1	82	58.005	Kryptolebias_marmoratus
ENSGMOG00000001953	-	51	63.587	ENSLBEG00000021417	RRP1	93	63.904	Labrus_bergylta
ENSGMOG00000001953	-	69	46.011	ENSLACG00000017332	-	64	46.978	Latimeria_chalumnae
ENSGMOG00000001953	-	71	57.418	ENSLOCG00000004064	-	64	58.689	Lepisosteus_oculatus
ENSGMOG00000001953	-	52	49.550	ENSLAFG00000000766	RRP1B	85	42.936	Loxodonta_africana
ENSGMOG00000001953	-	50	51.754	ENSLAFG00000022901	RRP1	78	43.391	Loxodonta_africana
ENSGMOG00000001953	-	67	48.182	ENSMFAG00000039152	RRP1B	62	48.182	Macaca_fascicularis
ENSGMOG00000001953	-	64	53.571	ENSMMUG00000000104	RRP1B	60	53.571	Macaca_mulatta
ENSGMOG00000001953	-	67	47.273	ENSMNEG00000034269	RRP1B	62	47.273	Macaca_nemestrina
ENSGMOG00000001953	-	63	48.182	ENSMLEG00000040044	RRP1B	60	48.182	Mandrillus_leucophaeus
ENSGMOG00000001953	-	69	52.688	ENSMGAG00000014591	RRP1B	60	52.688	Meleagris_gallopavo
ENSGMOG00000001953	-	61	47.706	ENSMAUG00000021508	Rrp1b	60	47.273	Mesocricetus_auratus
ENSGMOG00000001953	-	68	49.091	ENSMICG00000004686	RRP1B	64	49.091	Microcebus_murinus
ENSGMOG00000001953	-	69	47.706	ENSMOCG00000001117	Rrp1b	62	47.706	Microtus_ochrogaster
ENSGMOG00000001953	-	53	59.726	ENSMMOG00000019175	rrp1	93	60.000	Mola_mola
ENSGMOG00000001953	-	66	46.459	ENSMODG00000021033	RRP1B	62	46.260	Monodelphis_domestica
ENSGMOG00000001953	-	54	64.420	ENSMALG00000010310	rrp1	94	65.097	Monopterus_albus
ENSGMOG00000001953	-	68	44.954	MGP_CAROLIEiJ_G0021376	Rrp1b	58	58.824	Mus_caroli
ENSGMOG00000001953	-	62	45.872	ENSMUSG00000058392	Rrp1b	58	60.294	Mus_musculus
ENSGMOG00000001953	-	66	45.455	MGP_PahariEiJ_G0023695	Rrp1b	58	58.824	Mus_pahari
ENSGMOG00000001953	-	68	45.872	MGP_SPRETEiJ_G0022290	Rrp1b	90	45.283	Mus_spretus
ENSGMOG00000001953	-	54	47.426	ENSMPUG00000009826	RRP1	68	52.542	Mustela_putorius_furo
ENSGMOG00000001953	-	67	48.148	ENSMLUG00000007738	RRP1B	63	48.148	Myotis_lucifugus
ENSGMOG00000001953	-	51	52.489	ENSMLUG00000017788	RRP1	60	53.030	Myotis_lucifugus
ENSGMOG00000001953	-	69	50.450	ENSNGAG00000021073	Rrp1b	62	50.000	Nannospalax_galili
ENSGMOG00000001953	-	67	47.706	ENSNLEG00000001490	RRP1B	65	47.706	Nomascus_leucogenys
ENSGMOG00000001953	-	50	59.130	ENSMEUG00000003226	-	58	59.130	Notamacropus_eugenii
ENSGMOG00000001953	-	62	46.364	ENSODEG00000013177	RRP1B	63	46.364	Octodon_degus
ENSGMOG00000001953	-	67	64.052	ENSONIG00000004264	rrp1	67	64.310	Oreochromis_niloticus
ENSGMOG00000001953	-	66	45.045	ENSOANG00000006470	RRP1B	63	45.045	Ornithorhynchus_anatinus
ENSGMOG00000001953	-	57	47.748	ENSOCUG00000025931	RRP1B	60	47.748	Oryctolagus_cuniculus
ENSGMOG00000001953	-	73	58.355	ENSORLG00020007199	-	62	59.290	Oryzias_latipes_hni
ENSGMOG00000001953	-	73	58.886	ENSORLG00015004425	-	62	59.836	Oryzias_latipes_hsok
ENSGMOG00000001953	-	73	58.400	ENSOMEG00000016910	-	66	59.290	Oryzias_melastigma
ENSGMOG00000001953	-	67	50.588	ENSOGAG00000009872	RRP1B	67	50.588	Otolemur_garnettii
ENSGMOG00000001953	-	58	51.163	ENSOARG00000011314	RRP1B	58	51.163	Ovis_aries
ENSGMOG00000001953	-	63	49.091	ENSPPAG00000035319	RRP1B	60	49.091	Pan_paniscus
ENSGMOG00000001953	-	53	44.693	ENSPPRG00000010656	RRP1	79	46.264	Panthera_pardus
ENSGMOG00000001953	-	68	46.364	ENSPPRG00000010356	RRP1B	65	46.364	Panthera_pardus
ENSGMOG00000001953	-	63	46.364	ENSPTIG00000016894	RRP1B	72	46.364	Panthera_tigris_altaica
ENSGMOG00000001953	-	67	49.091	ENSPTRG00000013958	RRP1B	62	49.091	Pan_troglodytes
ENSGMOG00000001953	-	67	48.182	ENSPANG00000011090	RRP1B	62	48.182	Papio_anubis
ENSGMOG00000001953	-	69	54.701	ENSPKIG00000003422	-	59	54.701	Paramormyrops_kingsleyae
ENSGMOG00000001953	-	67	51.376	ENSPSIG00000008152	RRP1B	59	48.624	Pelodiscus_sinensis
ENSGMOG00000001953	-	52	51.549	ENSPMGG00000007512	-	90	51.821	Periophthalmus_magnuspinnatus
ENSGMOG00000001953	-	65	46.789	ENSPEMG00000022490	Rrp1b	63	46.789	Peromyscus_maniculatus_bairdii
ENSGMOG00000001953	-	65	52.439	ENSPCIG00000015513	RRP1B	62	52.439	Phascolarctos_cinereus
ENSGMOG00000001953	-	50	44.898	ENSPCIG00000015523	-	75	45.614	Phascolarctos_cinereus
ENSGMOG00000001953	-	73	58.995	ENSPFOG00000007424	-	69	59.946	Poecilia_formosa
ENSGMOG00000001953	-	55	59.893	ENSPLAG00000016684	-	52	60.882	Poecilia_latipinna
ENSGMOG00000001953	-	73	59.893	ENSPMEG00000007042	-	66	60.882	Poecilia_mexicana
ENSGMOG00000001953	-	73	59.893	ENSPREG00000015673	-	66	61.157	Poecilia_reticulata
ENSGMOG00000001953	-	67	47.706	ENSPPYG00000011470	RRP1B	62	47.706	Pongo_abelii
ENSGMOG00000001953	-	69	48.182	ENSPCOG00000017927	RRP1B	64	48.182	Propithecus_coquereli
ENSGMOG00000001953	-	69	44.954	ENSRNOG00000001194	Rrp1b	63	44.954	Rattus_norvegicus
ENSGMOG00000001953	-	67	49.091	ENSRBIG00000041689	RRP1B	61	49.091	Rhinopithecus_bieti
ENSGMOG00000001953	-	67	49.091	ENSRROG00000031499	RRP1B	62	49.091	Rhinopithecus_roxellana
ENSGMOG00000001953	-	66	46.429	ENSSHAG00000017789	RRP1B	62	45.706	Sarcophilus_harrisii
ENSGMOG00000001953	-	61	61.905	ENSSFOG00015003932	-	57	61.905	Scleropages_formosus
ENSGMOG00000001953	-	73	64.323	ENSSMAG00000016847	-	87	63.215	Scophthalmus_maximus
ENSGMOG00000001953	-	74	63.708	ENSSDUG00000000551	-	60	64.420	Seriola_dumerili
ENSGMOG00000001953	-	74	63.708	ENSSLDG00000002538	-	60	64.420	Seriola_lalandi_dorsalis
ENSGMOG00000001953	-	55	48.182	ENSSARG00000003108	-	58	48.182	Sorex_araneus
ENSGMOG00000001953	-	70	45.000	ENSSPUG00000002834	RRP1B	64	45.879	Sphenodon_punctatus
ENSGMOG00000001953	-	69	60.000	ENSSPAG00000005370	-	59	61.680	Stegastes_partitus
ENSGMOG00000001953	-	65	58.824	ENSSSCG00000021698	RRP1B	65	58.824	Sus_scrofa
ENSGMOG00000001953	-	54	43.127	ENSSSCG00000037061	RRP1	79	44.258	Sus_scrofa
ENSGMOG00000001953	-	62	50.538	ENSTGUG00000005926	RRP1B	58	50.538	Taeniopygia_guttata
ENSGMOG00000001953	-	51	61.299	ENSTRUG00000017592	rrp1	100	61.299	Takifugu_rubripes
ENSGMOG00000001953	-	63	70.149	ENSTNIG00000005053	rrp1	68	70.149	Tetraodon_nigroviridis
ENSGMOG00000001953	-	56	49.206	ENSTBEG00000000422	RRP1B	68	49.206	Tupaia_belangeri
ENSGMOG00000001953	-	66	46.789	ENSTTRG00000000723	RRP1B	64	46.789	Tursiops_truncatus
ENSGMOG00000001953	-	69	45.455	ENSUAMG00000026765	RRP1B	69	45.872	Ursus_americanus
ENSGMOG00000001953	-	63	46.729	ENSUMAG00000025510	RRP1B	83	47.664	Ursus_maritimus
ENSGMOG00000001953	-	63	45.872	ENSVVUG00000024509	RRP1B	61	45.872	Vulpes_vulpes
ENSGMOG00000001953	-	68	45.640	ENSXETG00000013683	rrp1b	69	45.087	Xenopus_tropicalis
ENSGMOG00000001953	-	73	57.812	ENSXMAG00000023123	-	67	58.713	Xiphophorus_maculatus