EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000002519 (Gene tree)
Gene ID: -
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b%2C subunit 4
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 5058 bases
Position: chrGeneScaffold_2112:326549-331606
Accession: ZDB-GENE-020419-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000002653	RRM_1	PF00076.22	1.2e-39	1	2
ENSGMOP00000002653	RRM_1	PF00076.22	1.2e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000002738	-	1026	-	ENSGMOP00000002653	341 (aa)	-	UPI00023EFAE1

Gene Model

Click here to download ENSGMOG00000002519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000002519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000002519	sf3b4	53	36.986	ENSGMOG00000006515	elavl4	89	32.121
ENSGMOG00000002519	sf3b4	53	40.659	ENSGMOG00000004437	pabpc1l	59	35.912
ENSGMOG00000002519	sf3b4	53	38.251	ENSGMOG00000002448	-	56	38.251
ENSGMOG00000002519	sf3b4	53	38.798	ENSGMOG00000013448	pabpc1a	56	38.798
ENSGMOG00000002519	sf3b4	53	36.842	ENSGMOG00000011182	ELAVL2	71	36.667
ENSGMOG00000002519	sf3b4	56	34.359	ENSGMOG00000008423	tia1l	65	34.171
ENSGMOG00000002519	sf3b4	53	40.984	ENSGMOG00000019025	pabpc4	57	40.984
ENSGMOG00000002519	sf3b4	53	34.615	ENSGMOG00000008843	tia1	75	34.615
ENSGMOG00000002519	sf3b4	53	36.986	ENSGMOG00000003760	elavl3	74	36.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000002519	sf3b4	67	97.368	ENSG00000143368	SF3B4	98	96.257	Homo_sapiens
ENSGMOG00000002519	sf3b4	67	98.696	ENSAPOG00000017647	sf3b4	58	98.696	Acanthochromis_polyacanthus
ENSGMOG00000002519	sf3b4	67	97.368	ENSAMEG00000010073	SF3B4	54	96.957	Ailuropoda_melanoleuca
ENSGMOG00000002519	sf3b4	67	96.957	ENSACIG00000018455	sf3b4	78	92.395	Amphilophus_citrinellus
ENSGMOG00000002519	sf3b4	67	98.678	ENSAOCG00000019801	sf3b4	57	98.690	Amphiprion_ocellaris
ENSGMOG00000002519	sf3b4	67	98.678	ENSAPEG00000010365	sf3b4	57	98.690	Amphiprion_percula
ENSGMOG00000002519	sf3b4	67	98.261	ENSATEG00000012844	sf3b4	57	98.690	Anabas_testudineus
ENSGMOG00000002519	sf3b4	63	99.533	ENSACAG00000010019	SF3B4	55	97.380	Anolis_carolinensis
ENSGMOG00000002519	sf3b4	67	97.368	ENSANAG00000031025	SF3B4	54	96.957	Aotus_nancymaae
ENSGMOG00000002519	sf3b4	70	96.203	ENSACLG00000014260	sf3b4	57	97.826	Astatotilapia_calliptera
ENSGMOG00000002519	sf3b4	67	97.391	ENSAMXG00000008282	sf3b4	61	80.702	Astyanax_mexicanus
ENSGMOG00000002519	sf3b4	67	97.368	ENSBTAG00000012495	SF3B4	54	96.957	Bos_taurus
ENSGMOG00000002519	sf3b4	83	67.254	WBGene00004723	sap-49	54	81.991	Caenorhabditis_elegans
ENSGMOG00000002519	sf3b4	67	97.368	ENSCAFG00000011617	SF3B4	54	96.957	Canis_familiaris
ENSGMOG00000002519	sf3b4	67	97.368	ENSCAFG00020019775	SF3B4	54	96.957	Canis_lupus_dingo
ENSGMOG00000002519	sf3b4	67	97.368	ENSCHIG00000025663	-	54	96.957	Capra_hircus
ENSGMOG00000002519	sf3b4	67	97.368	ENSTSYG00000009295	SF3B4	54	96.957	Carlito_syrichta
ENSGMOG00000002519	sf3b4	67	97.368	ENSCPOG00000008267	SF3B4	54	96.957	Cavia_porcellus
ENSGMOG00000002519	sf3b4	67	96.491	ENSCCAG00000021751	-	52	96.087	Cebus_capucinus
ENSGMOG00000002519	sf3b4	67	97.368	ENSCATG00000033114	SF3B4	54	96.957	Cercocebus_atys
ENSGMOG00000002519	sf3b4	67	97.368	ENSCLAG00000015851	SF3B4	54	96.957	Chinchilla_lanigera
ENSGMOG00000002519	sf3b4	67	97.368	ENSCSAG00000018129	SF3B4	54	96.957	Chlorocebus_sabaeus
ENSGMOG00000002519	sf3b4	66	87.946	ENSCING00000002337	-	56	90.047	Ciona_intestinalis
ENSGMOG00000002519	sf3b4	61	90.714	ENSCSAVG00000007809	-	88	89.091	Ciona_savignyi
ENSGMOG00000002519	sf3b4	67	97.368	ENSCANG00000035579	SF3B4	54	96.957	Colobus_angolensis_palliatus
ENSGMOG00000002519	sf3b4	67	97.368	ENSCGRG00001003590	Sf3b4	54	96.957	Cricetulus_griseus_chok1gshd
ENSGMOG00000002519	sf3b4	67	97.368	ENSCGRG00000016914	Sf3b4	54	96.957	Cricetulus_griseus_crigri
ENSGMOG00000002519	sf3b4	70	94.937	ENSCVAG00000005536	sf3b4	59	95.197	Cyprinodon_variegatus
ENSGMOG00000002519	sf3b4	67	97.391	ENSDARG00000018574	sf3b4	81	77.477	Danio_rerio
ENSGMOG00000002519	sf3b4	57	86.735	ENSDNOG00000037231	-	50	86.735	Dasypus_novemcinctus
ENSGMOG00000002519	sf3b4	65	91.818	ENSDNOG00000048908	-	53	91.441	Dasypus_novemcinctus
ENSGMOG00000002519	sf3b4	67	97.368	ENSDORG00000016366	Sf3b4	54	96.957	Dipodomys_ordii
ENSGMOG00000002519	sf3b4	65	86.425	FBgn0015818	Spx	80	72.760	Drosophila_melanogaster
ENSGMOG00000002519	sf3b4	67	87.281	ENSETEG00000008963	SF3B4	54	86.957	Echinops_telfairi
ENSGMOG00000002519	sf3b4	67	97.368	ENSEASG00005001477	SF3B4	54	96.957	Equus_asinus_asinus
ENSGMOG00000002519	sf3b4	67	97.368	ENSECAG00000024737	SF3B4	54	96.957	Equus_caballus
ENSGMOG00000002519	sf3b4	67	98.261	ENSELUG00000012876	sf3b4	81	76.994	Esox_lucius
ENSGMOG00000002519	sf3b4	67	97.368	ENSFCAG00000010106	SF3B4	54	96.957	Felis_catus
ENSGMOG00000002519	sf3b4	67	97.368	ENSFDAG00000009286	SF3B4	54	96.957	Fukomys_damarensis
ENSGMOG00000002519	sf3b4	63	99.533	ENSGALG00000013352	SF3B4	55	97.380	Gallus_gallus
ENSGMOG00000002519	sf3b4	67	98.261	ENSGAFG00000010181	sf3b4	78	80.782	Gambusia_affinis
ENSGMOG00000002519	sf3b4	67	97.368	ENSGGOG00000004761	SF3B4	54	96.957	Gorilla_gorilla
ENSGMOG00000002519	sf3b4	85	71.237	ENSGGOG00000038845	-	54	89.048	Gorilla_gorilla
ENSGMOG00000002519	sf3b4	70	96.203	ENSHBUG00000002028	sf3b4	57	97.826	Haplochromis_burtoni
ENSGMOG00000002519	sf3b4	67	97.368	ENSHGLG00000012360	SF3B4	54	96.957	Heterocephalus_glaber_female
ENSGMOG00000002519	sf3b4	67	97.368	ENSHGLG00100008533	SF3B4	55	96.957	Heterocephalus_glaber_male
ENSGMOG00000002519	sf3b4	67	97.357	ENSHCOG00000003014	sf3b4	57	97.380	Hippocampus_comes
ENSGMOG00000002519	sf3b4	67	97.826	ENSIPUG00000012242	Sf3b4	58	97.826	Ictalurus_punctatus
ENSGMOG00000002519	sf3b4	67	97.368	ENSSTOG00000000684	-	54	96.957	Ictidomys_tridecemlineatus
ENSGMOG00000002519	sf3b4	66	69.853	ENSJJAG00000022500	Sf3b4	55	70.073	Jaculus_jaculus
ENSGMOG00000002519	sf3b4	70	96.203	ENSKMAG00000008154	sf3b4	59	97.835	Kryptolebias_marmoratus
ENSGMOG00000002519	sf3b4	68	96.996	ENSLBEG00000026818	sf3b4	58	97.826	Labrus_bergylta
ENSGMOG00000002519	sf3b4	67	98.253	ENSLOCG00000009048	sf3b4	63	88.015	Lepisosteus_oculatus
ENSGMOG00000002519	sf3b4	67	97.368	ENSLAFG00000008531	SF3B4	54	96.957	Loxodonta_africana
ENSGMOG00000002519	sf3b4	81	67.742	ENSMFAG00000039067	-	58	78.341	Macaca_fascicularis
ENSGMOG00000002519	sf3b4	67	97.368	ENSMFAG00000042395	SF3B4	54	96.957	Macaca_fascicularis
ENSGMOG00000002519	sf3b4	67	97.368	ENSMMUG00000007256	SF3B4	54	96.957	Macaca_mulatta
ENSGMOG00000002519	sf3b4	67	97.368	ENSMNEG00000031839	SF3B4	54	96.957	Macaca_nemestrina
ENSGMOG00000002519	sf3b4	81	67.384	ENSMNEG00000031526	-	58	77.880	Macaca_nemestrina
ENSGMOG00000002519	sf3b4	67	97.368	ENSMLEG00000038667	SF3B4	54	96.957	Mandrillus_leucophaeus
ENSGMOG00000002519	sf3b4	77	79.725	ENSMAMG00000014692	sf3b4	79	77.707	Mastacembelus_armatus
ENSGMOG00000002519	sf3b4	70	96.203	ENSMZEG00005026741	sf3b4	57	97.826	Maylandia_zebra
ENSGMOG00000002519	sf3b4	79	99.533	ENSMGAG00000000653	SF3B4	55	97.380	Meleagris_gallopavo
ENSGMOG00000002519	sf3b4	67	97.368	ENSMAUG00000015266	Sf3b4	54	96.957	Mesocricetus_auratus
ENSGMOG00000002519	sf3b4	67	97.368	ENSMICG00000044961	SF3B4	54	96.957	Microcebus_murinus
ENSGMOG00000002519	sf3b4	67	97.368	ENSMOCG00000013658	-	54	96.957	Microtus_ochrogaster
ENSGMOG00000002519	sf3b4	67	97.391	ENSMMOG00000018032	sf3b4	100	71.429	Mola_mola
ENSGMOG00000002519	sf3b4	67	97.368	ENSMODG00000018767	SF3B4	54	96.957	Monodelphis_domestica
ENSGMOG00000002519	sf3b4	67	98.238	ENSMALG00000006174	sf3b4	57	98.253	Monopterus_albus
ENSGMOG00000002519	sf3b4	67	97.368	MGP_CAROLIEiJ_G0025365	Sf3b4	54	96.957	Mus_caroli
ENSGMOG00000002519	sf3b4	67	97.368	ENSMUSG00000068856	Sf3b4	54	96.957	Mus_musculus
ENSGMOG00000002519	sf3b4	67	97.368	MGP_PahariEiJ_G0026809	Sf3b4	54	96.957	Mus_pahari
ENSGMOG00000002519	sf3b4	67	97.368	MGP_SPRETEiJ_G0026309	Sf3b4	54	96.957	Mus_spretus
ENSGMOG00000002519	sf3b4	67	97.368	ENSMPUG00000005563	SF3B4	54	96.957	Mustela_putorius_furo
ENSGMOG00000002519	sf3b4	67	97.368	ENSMLUG00000010789	SF3B4	54	97.380	Myotis_lucifugus
ENSGMOG00000002519	sf3b4	67	97.368	ENSNGAG00000016337	Sf3b4	54	96.957	Nannospalax_galili
ENSGMOG00000002519	sf3b4	70	96.624	ENSNBRG00000013865	sf3b4	57	98.261	Neolamprologus_brichardi
ENSGMOG00000002519	sf3b4	100	49.180	ENSNLEG00000009693	-	100	49.180	Nomascus_leucogenys
ENSGMOG00000002519	sf3b4	70	70.588	ENSODEG00000008916	-	55	75.943	Octodon_degus
ENSGMOG00000002519	sf3b4	70	95.781	ENSONIG00000002730	sf3b4	57	97.826	Oreochromis_niloticus
ENSGMOG00000002519	sf3b4	74	72.201	ENSOANG00000004768	-	50	81.308	Ornithorhynchus_anatinus
ENSGMOG00000002519	sf3b4	67	97.368	ENSOCUG00000004614	SF3B4	54	96.957	Oryctolagus_cuniculus
ENSGMOG00000002519	sf3b4	68	97.414	ENSORLG00000003062	sf3b4	58	97.826	Oryzias_latipes
ENSGMOG00000002519	sf3b4	68	97.414	ENSORLG00020000687	sf3b4	58	97.826	Oryzias_latipes_hni
ENSGMOG00000002519	sf3b4	68	97.414	ENSORLG00015010989	sf3b4	58	97.826	Oryzias_latipes_hsok
ENSGMOG00000002519	sf3b4	67	97.826	ENSOMEG00000013694	sf3b4	58	97.826	Oryzias_melastigma
ENSGMOG00000002519	sf3b4	67	97.368	ENSOGAG00000006265	SF3B4	54	96.957	Otolemur_garnettii
ENSGMOG00000002519	sf3b4	68	79.399	ENSOARG00000007368	-	55	80.973	Ovis_aries
ENSGMOG00000002519	sf3b4	67	97.368	ENSOARG00000020718	-	54	96.957	Ovis_aries
ENSGMOG00000002519	sf3b4	67	97.368	ENSPPAG00000040904	SF3B4	54	96.957	Pan_paniscus
ENSGMOG00000002519	sf3b4	85	75.258	ENSPPAG00000030024	-	56	86.522	Pan_paniscus
ENSGMOG00000002519	sf3b4	67	97.368	ENSPPRG00000007384	SF3B4	54	96.957	Panthera_pardus
ENSGMOG00000002519	sf3b4	67	97.368	ENSPTIG00000014530	SF3B4	54	96.957	Panthera_tigris_altaica
ENSGMOG00000002519	sf3b4	86	74.333	ENSPTRG00000049727	-	81	69.375	Pan_troglodytes
ENSGMOG00000002519	sf3b4	67	97.368	ENSPTRG00000001243	SF3B4	54	96.957	Pan_troglodytes
ENSGMOG00000002519	sf3b4	67	97.368	ENSPANG00000005126	SF3B4	54	96.957	Papio_anubis
ENSGMOG00000002519	sf3b4	69	97.009	ENSPKIG00000020669	sf3b4	58	98.261	Paramormyrops_kingsleyae
ENSGMOG00000002519	sf3b4	50	99.415	ENSPSIG00000009565	SF3B4	68	97.312	Pelodiscus_sinensis
ENSGMOG00000002519	sf3b4	67	97.368	ENSPEMG00000017568	Sf3b4	54	96.957	Peromyscus_maniculatus_bairdii
ENSGMOG00000002519	sf3b4	62	94.836	ENSPMAG00000007842	-	50	94.811	Petromyzon_marinus
ENSGMOG00000002519	sf3b4	67	97.368	ENSPCIG00000008765	SF3B4	54	96.957	Phascolarctos_cinereus
ENSGMOG00000002519	sf3b4	70	95.781	ENSPFOG00000005754	sf3b4	58	98.253	Poecilia_formosa
ENSGMOG00000002519	sf3b4	70	95.781	ENSPLAG00000001401	sf3b4	63	98.253	Poecilia_latipinna
ENSGMOG00000002519	sf3b4	61	96.154	ENSPCAG00000000392	SF3B4	50	96.154	Procavia_capensis
ENSGMOG00000002519	sf3b4	67	97.368	ENSPCOG00000015399	SF3B4	54	96.957	Propithecus_coquereli
ENSGMOG00000002519	sf3b4	67	97.368	ENSPVAG00000014171	SF3B4	54	96.957	Pteropus_vampyrus
ENSGMOG00000002519	sf3b4	70	96.203	ENSPNYG00000012700	sf3b4	57	97.826	Pundamilia_nyererei
ENSGMOG00000002519	sf3b4	67	97.391	ENSPNAG00000000686	sf3b4	59	97.391	Pygocentrus_nattereri
ENSGMOG00000002519	sf3b4	67	97.368	ENSRNOG00000021181	Sf3b4	54	96.957	Rattus_norvegicus
ENSGMOG00000002519	sf3b4	67	97.368	ENSRBIG00000043392	SF3B4	54	96.957	Rhinopithecus_bieti
ENSGMOG00000002519	sf3b4	67	97.368	ENSRROG00000029366	SF3B4	54	96.957	Rhinopithecus_roxellana
ENSGMOG00000002519	sf3b4	53	37.949	YOR319W	-	91	37.949	Saccharomyces_cerevisiae
ENSGMOG00000002519	sf3b4	67	96.930	ENSSBOG00000012310	-	54	96.522	Saimiri_boliviensis_boliviensis
ENSGMOG00000002519	sf3b4	67	92.544	ENSSHAG00000004043	SF3B4	54	91.964	Sarcophilus_harrisii
ENSGMOG00000002519	sf3b4	70	95.781	ENSSFOG00015008864	sf3b4	84	75.358	Scleropages_formosus
ENSGMOG00000002519	sf3b4	66	99.115	ENSSMAG00000006837	sf3b4	58	98.696	Scophthalmus_maximus
ENSGMOG00000002519	sf3b4	67	97.826	ENSSDUG00000012064	sf3b4	76	79.479	Seriola_dumerili
ENSGMOG00000002519	sf3b4	67	97.826	ENSSLDG00000014226	sf3b4	76	79.479	Seriola_lalandi_dorsalis
ENSGMOG00000002519	sf3b4	63	99.533	ENSSPUG00000001028	SF3B4	58	97.391	Sphenodon_punctatus
ENSGMOG00000002519	sf3b4	67	97.826	ENSSPAG00000019219	sf3b4	57	97.826	Stegastes_partitus
ENSGMOG00000002519	sf3b4	67	97.368	ENSSSCG00000006665	-	54	96.957	Sus_scrofa
ENSGMOG00000002519	sf3b4	68	95.708	ENSTGUG00000004470	SF3B4	91	96.957	Taeniopygia_guttata
ENSGMOG00000002519	sf3b4	67	97.797	ENSTRUG00000004516	sf3b4	86	69.298	Takifugu_rubripes
ENSGMOG00000002519	sf3b4	67	97.826	ENSTNIG00000009156	sf3b4	59	97.826	Tetraodon_nigroviridis
ENSGMOG00000002519	sf3b4	67	97.368	ENSTTRG00000005217	SF3B4	54	96.957	Tursiops_truncatus
ENSGMOG00000002519	sf3b4	67	97.368	ENSUAMG00000022468	SF3B4	54	96.957	Ursus_americanus
ENSGMOG00000002519	sf3b4	63	97.222	ENSVPAG00000008152	SF3B4	53	96.789	Vicugna_pacos
ENSGMOG00000002519	sf3b4	68	91.416	ENSXETG00000011038	sf3b4	53	99.502	Xenopus_tropicalis
ENSGMOG00000002519	sf3b4	67	98.690	ENSXCOG00000019895	sf3b4	59	98.690	Xiphophorus_couchianus