EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000002600 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 168334 bases
Position: chrGeneScaffold_948:100568-268901
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000002755	RRM_1	PF00076.22	1.6e-30	1	2
ENSGMOP00000002755	RRM_1	PF00076.22	1.6e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000002845	-	1245	-	ENSGMOP00000002755	415 (aa)	-	UPI00023EFF08

Gene Model

Click here to download ENSGMOG00000002600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000002600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000002600	-	84	55.249	ENSGMOG00000000525	rbms1a	94	55.249
ENSGMOG00000002600	-	99	61.772	ENSGMOG00000005250	rbms2b	82	68.132

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000002600	-	93	83.247	ENSG00000144642	RBMS3	83	90.868	Homo_sapiens
ENSGMOG00000002600	-	96	89.421	ENSAPOG00000003432	-	90	89.421	Acanthochromis_polyacanthus
ENSGMOG00000002600	-	87	79.282	ENSAPOG00000007266	rbms3	83	78.804	Acanthochromis_polyacanthus
ENSGMOG00000002600	-	74	79.935	ENSAMEG00000005947	RBMS3	99	79.612	Ailuropoda_melanoleuca
ENSGMOG00000002600	-	93	68.380	ENSACIG00000021113	RBMS3	95	68.895	Amphilophus_citrinellus
ENSGMOG00000002600	-	73	95.738	ENSACIG00000006987	-	83	95.738	Amphilophus_citrinellus
ENSGMOG00000002600	-	96	89.421	ENSAOCG00000024104	-	90	86.398	Amphiprion_ocellaris
ENSGMOG00000002600	-	93	79.177	ENSAOCG00000021274	rbms3	87	78.481	Amphiprion_ocellaris
ENSGMOG00000002600	-	96	80.605	ENSAPEG00000009481	-	89	81.108	Amphiprion_percula
ENSGMOG00000002600	-	87	77.600	ENSAPEG00000016299	rbms3	87	80.282	Amphiprion_percula
ENSGMOG00000002600	-	93	78.663	ENSATEG00000024295	rbms3	87	78.734	Anabas_testudineus
ENSGMOG00000002600	-	96	89.421	ENSATEG00000008433	-	90	89.421	Anabas_testudineus
ENSGMOG00000002600	-	99	80.383	ENSAPLG00000012270	RBMS3	89	81.313	Anas_platyrhynchos
ENSGMOG00000002600	-	93	82.990	ENSACAG00000028664	RBMS3	88	81.566	Anolis_carolinensis
ENSGMOG00000002600	-	93	83.247	ENSANAG00000021899	RBMS3	88	82.071	Aotus_nancymaae
ENSGMOG00000002600	-	96	88.917	ENSACLG00000008976	-	85	83.871	Astatotilapia_calliptera
ENSGMOG00000002600	-	97	75.728	ENSACLG00000018506	rbms3	95	78.228	Astatotilapia_calliptera
ENSGMOG00000002600	-	94	84.062	ENSAMXG00000020388	rbms3	89	83.586	Astyanax_mexicanus
ENSGMOG00000002600	-	57	87.660	ENSAMXG00000043770	-	84	88.532	Astyanax_mexicanus
ENSGMOG00000002600	-	93	83.247	ENSBTAG00000044062	RBMS3	96	81.818	Bos_taurus
ENSGMOG00000002600	-	93	83.247	ENSCJAG00000004312	RBMS3	88	81.818	Callithrix_jacchus
ENSGMOG00000002600	-	93	83.247	ENSCAFG00000005464	RBMS3	88	82.071	Canis_familiaris
ENSGMOG00000002600	-	93	83.247	ENSCAFG00020024980	RBMS3	89	82.071	Canis_lupus_dingo
ENSGMOG00000002600	-	93	82.990	ENSCHIG00000009144	RBMS3	88	81.566	Capra_hircus
ENSGMOG00000002600	-	81	81.121	ENSTSYG00000002615	RBMS3	99	80.826	Carlito_syrichta
ENSGMOG00000002600	-	93	77.261	ENSCAPG00000017783	RBMS3	95	76.263	Cavia_aperea
ENSGMOG00000002600	-	93	82.776	ENSCPOG00000006457	RBMS3	90	81.864	Cavia_porcellus
ENSGMOG00000002600	-	93	83.247	ENSCCAG00000008671	RBMS3	88	81.818	Cebus_capucinus
ENSGMOG00000002600	-	93	82.946	ENSCATG00000013222	RBMS3	88	81.519	Cercocebus_atys
ENSGMOG00000002600	-	93	82.732	ENSCLAG00000005866	RBMS3	88	81.566	Chinchilla_lanigera
ENSGMOG00000002600	-	70	78.082	ENSCSAG00000009655	RBMS3	99	78.082	Chlorocebus_sabaeus
ENSGMOG00000002600	-	87	81.944	ENSCHOG00000000758	RBMS3	80	81.667	Choloepus_hoffmanni
ENSGMOG00000002600	-	93	82.474	ENSCPBG00000022678	RBMS3	87	83.708	Chrysemys_picta_bellii
ENSGMOG00000002600	-	93	82.990	ENSCANG00000032137	RBMS3	88	81.566	Colobus_angolensis_palliatus
ENSGMOG00000002600	-	93	80.670	ENSCGRG00001007243	Rbms3	90	79.597	Cricetulus_griseus_chok1gshd
ENSGMOG00000002600	-	93	80.670	ENSCGRG00000004599	Rbms3	90	79.597	Cricetulus_griseus_crigri
ENSGMOG00000002600	-	93	78.149	ENSCSEG00000010011	RBMS3	90	78.061	Cynoglossus_semilaevis
ENSGMOG00000002600	-	96	88.665	ENSCSEG00000014677	-	87	95.738	Cynoglossus_semilaevis
ENSGMOG00000002600	-	97	89.136	ENSCVAG00000022814	-	91	96.154	Cyprinodon_variegatus
ENSGMOG00000002600	-	93	78.149	ENSCVAG00000022354	rbms3	87	78.061	Cyprinodon_variegatus
ENSGMOG00000002600	-	94	83.033	ENSDARG00000044574	rbms3	95	94.203	Danio_rerio
ENSGMOG00000002600	-	93	82.732	ENSDNOG00000016645	RBMS3	88	81.313	Dasypus_novemcinctus
ENSGMOG00000002600	-	93	82.216	ENSDORG00000007220	Rbms3	88	81.061	Dipodomys_ordii
ENSGMOG00000002600	-	87	70.000	ENSETEG00000009485	-	80	70.000	Echinops_telfairi
ENSGMOG00000002600	-	67	53.929	ENSEBUG00000005830	rbms3	86	55.056	Eptatretus_burgeri
ENSGMOG00000002600	-	93	82.474	ENSEASG00005006152	RBMS3	87	91.760	Equus_asinus_asinus
ENSGMOG00000002600	-	93	82.732	ENSECAG00000017871	RBMS3	87	91.760	Equus_caballus
ENSGMOG00000002600	-	84	77.077	ENSEEUG00000014337	RBMS3	88	75.843	Erinaceus_europaeus
ENSGMOG00000002600	-	97	74.757	ENSELUG00000002862	rbms3	89	79.726	Esox_lucius
ENSGMOG00000002600	-	97	89.356	ENSELUG00000006905	-	98	89.169	Esox_lucius
ENSGMOG00000002600	-	93	82.990	ENSFCAG00000002130	RBMS3	88	81.818	Felis_catus
ENSGMOG00000002600	-	93	82.474	ENSFALG00000009165	RBMS3	88	81.313	Ficedula_albicollis
ENSGMOG00000002600	-	93	83.247	ENSFDAG00000008278	RBMS3	88	82.071	Fukomys_damarensis
ENSGMOG00000002600	-	98	64.976	ENSFHEG00000004787	RBMS3	94	70.000	Fundulus_heteroclitus
ENSGMOG00000002600	-	93	82.474	ENSGALG00000011439	RBMS3	88	81.313	Gallus_gallus
ENSGMOG00000002600	-	96	88.945	ENSGAFG00000003329	-	90	88.945	Gambusia_affinis
ENSGMOG00000002600	-	97	76.829	ENSGAFG00000000168	rbms3	85	91.954	Gambusia_affinis
ENSGMOG00000002600	-	70	78.157	ENSGAGG00000004039	RBMS3	99	78.157	Gopherus_agassizii
ENSGMOG00000002600	-	93	83.247	ENSGGOG00000007228	RBMS3	88	81.818	Gorilla_gorilla
ENSGMOG00000002600	-	52	89.720	ENSHBUG00000021196	rbms3	76	89.041	Haplochromis_burtoni
ENSGMOG00000002600	-	96	89.169	ENSHBUG00000019785	-	87	88.665	Haplochromis_burtoni
ENSGMOG00000002600	-	93	82.732	ENSHGLG00000002170	RBMS3	88	81.566	Heterocephalus_glaber_female
ENSGMOG00000002600	-	93	82.732	ENSHGLG00100014278	RBMS3	88	81.566	Heterocephalus_glaber_male
ENSGMOG00000002600	-	96	87.940	ENSHCOG00000007894	-	94	87.940	Hippocampus_comes
ENSGMOG00000002600	-	94	83.805	ENSIPUG00000017680	rbms3	89	83.586	Ictalurus_punctatus
ENSGMOG00000002600	-	94	82.821	ENSSTOG00000006324	RBMS3	88	82.071	Ictidomys_tridecemlineatus
ENSGMOG00000002600	-	99	79.475	ENSJJAG00000014708	Rbms3	89	80.605	Jaculus_jaculus
ENSGMOG00000002600	-	93	78.149	ENSKMAG00000020500	rbms3	86	77.806	Kryptolebias_marmoratus
ENSGMOG00000002600	-	96	88.917	ENSKMAG00000012586	-	86	96.154	Kryptolebias_marmoratus
ENSGMOG00000002600	-	96	88.413	ENSLBEG00000027388	-	90	88.413	Labrus_bergylta
ENSGMOG00000002600	-	66	68.421	ENSLBEG00000006677	rbms3	97	68.421	Labrus_bergylta
ENSGMOG00000002600	-	93	84.794	ENSLACG00000010581	RBMS3	89	83.123	Latimeria_chalumnae
ENSGMOG00000002600	-	75	82.958	ENSLOCG00000002328	rbms3	99	82.958	Lepisosteus_oculatus
ENSGMOG00000002600	-	93	82.990	ENSLAFG00000000354	RBMS3	89	81.818	Loxodonta_africana
ENSGMOG00000002600	-	93	82.990	ENSMFAG00000033300	RBMS3	88	81.566	Macaca_fascicularis
ENSGMOG00000002600	-	93	82.990	ENSMMUG00000004404	RBMS3	89	81.566	Macaca_mulatta
ENSGMOG00000002600	-	93	82.990	ENSMNEG00000035839	RBMS3	96	81.566	Macaca_nemestrina
ENSGMOG00000002600	-	93	82.946	ENSMLEG00000029464	RBMS3	88	81.519	Mandrillus_leucophaeus
ENSGMOG00000002600	-	96	88.665	ENSMAMG00000002176	-	84	88.665	Mastacembelus_armatus
ENSGMOG00000002600	-	93	79.177	ENSMAMG00000024043	rbms3	87	79.545	Mastacembelus_armatus
ENSGMOG00000002600	-	96	88.917	ENSMZEG00005026469	-	86	88.917	Maylandia_zebra
ENSGMOG00000002600	-	93	78.149	ENSMZEG00005006308	rbms3	87	78.228	Maylandia_zebra
ENSGMOG00000002600	-	93	80.670	ENSMAUG00000016436	Rbms3	90	79.597	Mesocricetus_auratus
ENSGMOG00000002600	-	93	83.505	ENSMICG00000049249	RBMS3	88	82.071	Microcebus_murinus
ENSGMOG00000002600	-	93	80.155	ENSMOCG00000006997	Rbms3	90	79.345	Microtus_ochrogaster
ENSGMOG00000002600	-	96	87.657	ENSMMOG00000015071	-	90	87.657	Mola_mola
ENSGMOG00000002600	-	87	77.748	ENSMMOG00000008471	RBMS3	89	80.966	Mola_mola
ENSGMOG00000002600	-	93	82.045	ENSMODG00000015125	RBMS3	86	82.732	Monodelphis_domestica
ENSGMOG00000002600	-	96	88.917	ENSMALG00000009155	-	90	88.917	Monopterus_albus
ENSGMOG00000002600	-	93	78.663	ENSMALG00000019536	RBMS3	87	78.734	Monopterus_albus
ENSGMOG00000002600	-	95	78.841	MGP_CAROLIEiJ_G0032783	Rbms3	100	89.610	Mus_caroli
ENSGMOG00000002600	-	93	80.155	ENSMUSG00000039607	Rbms3	99	89.610	Mus_musculus
ENSGMOG00000002600	-	93	79.949	MGP_PahariEiJ_G0015650	Rbms3	100	89.610	Mus_pahari
ENSGMOG00000002600	-	93	80.155	MGP_SPRETEiJ_G0033930	Rbms3	100	89.610	Mus_spretus
ENSGMOG00000002600	-	93	82.990	ENSMPUG00000011956	RBMS3	89	81.818	Mustela_putorius_furo
ENSGMOG00000002600	-	93	82.990	ENSMLUG00000000659	RBMS3	88	82.071	Myotis_lucifugus
ENSGMOG00000002600	-	93	82.216	ENSNGAG00000014039	Rbms3	90	81.108	Nannospalax_galili
ENSGMOG00000002600	-	96	88.917	ENSNBRG00000018065	-	90	88.917	Neolamprologus_brichardi
ENSGMOG00000002600	-	93	83.247	ENSNLEG00000004129	RBMS3	88	81.818	Nomascus_leucogenys
ENSGMOG00000002600	-	93	78.663	ENSMEUG00000004772	RBMS3	89	76.263	Notamacropus_eugenii
ENSGMOG00000002600	-	93	82.776	ENSOPRG00000006808	RBMS3	75	81.566	Ochotona_princeps
ENSGMOG00000002600	-	93	82.990	ENSODEG00000003651	RBMS3	88	81.818	Octodon_degus
ENSGMOG00000002600	-	93	78.149	ENSONIG00000007172	rbms3	90	78.228	Oreochromis_niloticus
ENSGMOG00000002600	-	93	82.990	ENSOANG00000010529	RBMS3	88	81.818	Ornithorhynchus_anatinus
ENSGMOG00000002600	-	93	82.732	ENSOCUG00000004840	RBMS3	88	81.313	Oryctolagus_cuniculus
ENSGMOG00000002600	-	96	88.413	ENSORLG00000002306	-	88	95.410	Oryzias_latipes
ENSGMOG00000002600	-	93	77.692	ENSORLG00000005370	RBMS3	87	77.296	Oryzias_latipes
ENSGMOG00000002600	-	93	77.436	ENSORLG00020022674	RBMS3	87	77.041	Oryzias_latipes_hni
ENSGMOG00000002600	-	96	88.413	ENSORLG00020008496	-	90	88.413	Oryzias_latipes_hni
ENSGMOG00000002600	-	96	88.413	ENSORLG00015015719	-	90	88.413	Oryzias_latipes_hsok
ENSGMOG00000002600	-	93	77.949	ENSORLG00015005509	rbms3	87	77.551	Oryzias_latipes_hsok
ENSGMOG00000002600	-	97	76.341	ENSOMEG00000014805	RBMS3	95	77.215	Oryzias_melastigma
ENSGMOG00000002600	-	97	88.861	ENSOMEG00000007677	-	99	98.175	Oryzias_melastigma
ENSGMOG00000002600	-	93	82.474	ENSOARG00000014684	RBMS3	88	81.061	Ovis_aries
ENSGMOG00000002600	-	93	83.247	ENSPPAG00000036519	RBMS3	88	81.818	Pan_paniscus
ENSGMOG00000002600	-	99	80.907	ENSPPRG00000002761	RBMS3	88	81.818	Panthera_pardus
ENSGMOG00000002600	-	99	80.907	ENSPTIG00000011568	RBMS3	89	81.818	Panthera_tigris_altaica
ENSGMOG00000002600	-	93	83.247	ENSPTRG00000014709	RBMS3	88	81.818	Pan_troglodytes
ENSGMOG00000002600	-	93	82.732	ENSPANG00000010234	RBMS3	88	78.922	Papio_anubis
ENSGMOG00000002600	-	53	91.743	ENSPKIG00000007989	-	84	91.743	Paramormyrops_kingsleyae
ENSGMOG00000002600	-	93	82.216	ENSPSIG00000005269	RBMS3	88	81.061	Pelodiscus_sinensis
ENSGMOG00000002600	-	87	78.167	ENSPMGG00000021544	rbms3	86	80.000	Periophthalmus_magnuspinnatus
ENSGMOG00000002600	-	97	89.109	ENSPMGG00000021683	-	98	88.917	Periophthalmus_magnuspinnatus
ENSGMOG00000002600	-	93	77.519	ENSPEMG00000001117	Rbms3	90	76.515	Peromyscus_maniculatus_bairdii
ENSGMOG00000002600	-	72	90.268	ENSPCIG00000006106	RBMS3	75	88.525	Phascolarctos_cinereus
ENSGMOG00000002600	-	93	78.920	ENSPFOG00000017887	rbms3	87	78.316	Poecilia_formosa
ENSGMOG00000002600	-	82	75.146	ENSPLAG00000016866	-	82	74.854	Poecilia_latipinna
ENSGMOG00000002600	-	96	89.196	ENSPMEG00000002993	-	90	89.196	Poecilia_mexicana
ENSGMOG00000002600	-	96	89.196	ENSPREG00000018221	-	81	94.340	Poecilia_reticulata
ENSGMOG00000002600	-	93	78.718	ENSPREG00000011880	rbms3	84	86.711	Poecilia_reticulata
ENSGMOG00000002600	-	93	68.380	ENSPPYG00000014050	RBMS3	72	67.424	Pongo_abelii
ENSGMOG00000002600	-	93	64.767	ENSPCAG00000006307	RBMS3	88	62.626	Procavia_capensis
ENSGMOG00000002600	-	93	83.505	ENSPCOG00000017136	RBMS3	89	82.071	Propithecus_coquereli
ENSGMOG00000002600	-	89	81.572	ENSPVAG00000014037	RBMS3	82	81.301	Pteropus_vampyrus
ENSGMOG00000002600	-	93	77.892	ENSPNYG00000010546	rbms3	87	77.975	Pundamilia_nyererei
ENSGMOG00000002600	-	96	88.917	ENSPNYG00000012624	-	90	88.917	Pundamilia_nyererei
ENSGMOG00000002600	-	94	83.805	ENSPNAG00000001800	rbms3	89	83.333	Pygocentrus_nattereri
ENSGMOG00000002600	-	93	80.155	ENSRNOG00000025881	Rbms3	90	79.093	Rattus_norvegicus
ENSGMOG00000002600	-	93	82.732	ENSRBIG00000035863	RBMS3	88	81.313	Rhinopithecus_bieti
ENSGMOG00000002600	-	93	82.732	ENSRROG00000027512	RBMS3	94	81.313	Rhinopithecus_roxellana
ENSGMOG00000002600	-	93	83.247	ENSSBOG00000020232	RBMS3	88	81.818	Saimiri_boliviensis_boliviensis
ENSGMOG00000002600	-	93	76.607	ENSSHAG00000002411	RBMS3	95	75.505	Sarcophilus_harrisii
ENSGMOG00000002600	-	97	86.634	ENSSFOG00015008578	rbms3	98	85.894	Scleropages_formosus
ENSGMOG00000002600	-	94	84.910	ENSSMAG00000020065	-	90	89.607	Scophthalmus_maximus
ENSGMOG00000002600	-	93	77.892	ENSSMAG00000004997	rbms3	99	78.406	Scophthalmus_maximus
ENSGMOG00000002600	-	96	89.421	ENSSDUG00000019287	-	90	89.421	Seriola_dumerili
ENSGMOG00000002600	-	93	78.920	ENSSDUG00000013656	RBMS3	89	78.987	Seriola_dumerili
ENSGMOG00000002600	-	96	89.421	ENSSLDG00000013224	-	90	89.421	Seriola_lalandi_dorsalis
ENSGMOG00000002600	-	93	79.177	ENSSLDG00000020276	RBMS3	86	79.241	Seriola_lalandi_dorsalis
ENSGMOG00000002600	-	84	71.633	ENSSARG00000000695	RBMS3	94	70.506	Sorex_araneus
ENSGMOG00000002600	-	75	77.707	ENSSPUG00000017197	RBMS3	97	77.707	Sphenodon_punctatus
ENSGMOG00000002600	-	96	89.421	ENSSPAG00000003983	-	90	84.635	Stegastes_partitus
ENSGMOG00000002600	-	93	78.663	ENSSPAG00000020693	rbms3	92	80.223	Stegastes_partitus
ENSGMOG00000002600	-	93	82.990	ENSSSCG00000036381	RBMS3	88	81.566	Sus_scrofa
ENSGMOG00000002600	-	82	80.294	ENSTGUG00000003572	RBMS3	99	80.588	Taeniopygia_guttata
ENSGMOG00000002600	-	93	78.205	ENSTRUG00000021719	RBMS3	86	77.806	Takifugu_rubripes
ENSGMOG00000002600	-	87	87.328	ENSTRUG00000007482	-	89	84.073	Takifugu_rubripes
ENSGMOG00000002600	-	84	87.966	ENSTBEG00000005362	RBMS3	94	85.393	Tupaia_belangeri
ENSGMOG00000002600	-	93	82.732	ENSTTRG00000006202	RBMS3	89	81.313	Tursiops_truncatus
ENSGMOG00000002600	-	93	83.247	ENSUMAG00000000263	RBMS3	88	82.071	Ursus_maritimus
ENSGMOG00000002600	-	93	73.196	ENSVPAG00000003842	RBMS3	94	71.717	Vicugna_pacos
ENSGMOG00000002600	-	93	83.247	ENSVVUG00000004660	RBMS3	94	91.324	Vulpes_vulpes
ENSGMOG00000002600	-	75	78.275	ENSXETG00000032055	RBMS3	98	78.275	Xenopus_tropicalis
ENSGMOG00000002600	-	97	76.543	ENSXCOG00000019600	-	98	75.628	Xiphophorus_couchianus
ENSGMOG00000002600	-	96	89.196	ENSXMAG00000014382	-	90	89.196	Xiphophorus_maculatus
ENSGMOG00000002600	-	93	78.663	ENSXMAG00000021783	rbms3	84	86.379	Xiphophorus_maculatus