EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGMOG00000002649 (Gene tree)
Gene ID
-
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4a
Gene Type
protein_coding
Species
Gadus_morhua
Status
putative
Strand
Plus strand
Length
25531 bases
Position
chrGeneScaffold_1395:124620-150150
Accession
ZDB-GENE-030605-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGMOP00000002858ResIIIPF04851.154.9e-0911
ENSGMOP00000002858BRKPF07533.168.6e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGMOT00000002949-4761-ENSGMOP000000028581586 (aa)-UPI00023EFD19
Gene Model
Click here to download ENSGMOG00000002649's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000002649's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGMOG00000002649smarca4a8679.775ENSGMOG00000005756-8079.775
ENSGMOG00000002649smarca4a8872.716ENSGMOG00000014229SMARCA27672.663
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGMOG00000002649smarca4a8781.882ENSG00000127616SMARCA49481.944Homo_sapiens
ENSGMOG00000002649smarca4a8884.646ENSAPOG00000004542SMARCA48682.898Acanthochromis_polyacanthus
ENSGMOG00000002649smarca4a6890.159ENSAPOG00000003509smarca4a8889.508Acanthochromis_polyacanthus
ENSGMOG00000002649smarca4a8781.882ENSAMEG00000010868SMARCA49174.937Ailuropoda_melanoleuca
ENSGMOG00000002649smarca4a9291.111ENSACIG00000021550smarca4a8693.220Amphilophus_citrinellus
ENSGMOG00000002649smarca4a8285.882ENSACIG00000003035-8583.806Amphilophus_citrinellus
ENSGMOG00000002649smarca4a7985.159ENSAOCG00000019167smarca4a7893.220Amphiprion_ocellaris
ENSGMOG00000002649smarca4a8783.475ENSAOCG00000009450-9082.301Amphiprion_ocellaris
ENSGMOG00000002649smarca4a9380.712ENSAPEG00000023108-8681.710Amphiprion_percula
ENSGMOG00000002649smarca4a7985.395ENSAPEG00000015559smarca4a7893.220Amphiprion_percula
ENSGMOG00000002649smarca4a9281.013ENSATEG00000001094-9276.608Anabas_testudineus
ENSGMOG00000002649smarca4a9489.881ENSATEG00000011524smarca4a8893.220Anabas_testudineus
ENSGMOG00000002649smarca4a8781.882ENSANAG00000036991SMARCA49380.547Aotus_nancymaae
ENSGMOG00000002649smarca4a8885.827ENSACLG00000008638-8483.740Astatotilapia_calliptera
ENSGMOG00000002649smarca4a9290.159ENSACLG00000000163smarca4a9189.836Astatotilapia_calliptera
ENSGMOG00000002649smarca4a8586.262ENSAMXG00000021023smarca4a8185.809Astyanax_mexicanus
ENSGMOG00000002649smarca4a8786.017ENSAMXG00000011238-8883.214Astyanax_mexicanus
ENSGMOG00000002649smarca4a8881.882ENSBTAG00000019220SMARCA49381.040Bos_taurus
ENSGMOG00000002649smarca4a8781.882ENSCJAG00000005936SMARCA49376.923Callithrix_jacchus
ENSGMOG00000002649smarca4a8781.882ENSCAFG00000017584SMARCA49381.040Canis_familiaris
ENSGMOG00000002649smarca4a8387.342ENSCAFG00020024620SMARCA48984.959Canis_lupus_dingo
ENSGMOG00000002649smarca4a8881.306ENSCHIG00000015318SMARCA49381.040Capra_hircus
ENSGMOG00000002649smarca4a8882.374ENSTSYG00000012966SMARCA49380.428Carlito_syrichta
ENSGMOG00000002649smarca4a7985.827ENSCAPG00000015932SMARCA48485.081Cavia_aperea
ENSGMOG00000002649smarca4a8781.765ENSCPOG00000015549SMARCA49381.346Cavia_porcellus
ENSGMOG00000002649smarca4a8778.035ENSCCAG00000031660SMARCA49376.923Cebus_capucinus
ENSGMOG00000002649smarca4a8781.882ENSCATG00000029530SMARCA49380.734Cercocebus_atys
ENSGMOG00000002649smarca4a8981.765ENSCLAG00000011946SMARCA49381.346Chinchilla_lanigera
ENSGMOG00000002649smarca4a8882.118ENSCPBG00000009994SMARCA49379.939Chrysemys_picta_bellii
ENSGMOG00000002649smarca4a8781.882ENSCANG00000036013SMARCA49381.040Colobus_angolensis_palliatus
ENSGMOG00000002649smarca4a8881.529ENSCGRG00001016732Smarca49380.734Cricetulus_griseus_chok1gshd
ENSGMOG00000002649smarca4a8881.529ENSCGRG00000017242Smarca49380.734Cricetulus_griseus_crigri
ENSGMOG00000002649smarca4a9088.393ENSCSEG00000014771smarca4a8890.678Cynoglossus_semilaevis
ENSGMOG00000002649smarca4a8983.552ENSCVAG00000003018-9175.871Cyprinodon_variegatus
ENSGMOG00000002649smarca4a9288.254ENSCVAG00000006979smarca4a8888.197Cyprinodon_variegatus
ENSGMOG00000002649smarca4a9486.350ENSDARG00000077226smarca4a8889.831Danio_rerio
ENSGMOG00000002649smarca4a8282.422ENSDARG00000104339SMARCA47582.738Danio_rerio
ENSGMOG00000002649smarca4a8979.412ENSDNOG00000048847SMARCA48784.848Dasypus_novemcinctus
ENSGMOG00000002649smarca4a7091.892ENSDORG00000002544Smarca48093.651Dipodomys_ordii
ENSGMOG00000002649smarca4a8282.979ENSETEG00000013361SMARCA48583.556Echinops_telfairi
ENSGMOG00000002649smarca4a8288.959ENSEASG00005006167SMARCA49380.734Equus_asinus_asinus
ENSGMOG00000002649smarca4a8782.374ENSECAG00000008334SMARCA49380.734Equus_caballus
ENSGMOG00000002649smarca4a8086.120ENSELUG00000023232-9081.311Esox_lucius
ENSGMOG00000002649smarca4a9489.286ENSELUG00000010247smarca4a8889.180Esox_lucius
ENSGMOG00000002649smarca4a8781.882ENSFCAG00000004894SMARCA49380.303Felis_catus
ENSGMOG00000002649smarca4a7782.422ENSFALG00000004208SMARCA48782.206Ficedula_albicollis
ENSGMOG00000002649smarca4a7882.374ENSFDAG00000012237SMARCA49081.347Fukomys_damarensis
ENSGMOG00000002649smarca4a9083.433ENSFHEG00000007902-9180.719Fundulus_heteroclitus
ENSGMOG00000002649smarca4a9088.393ENSFHEG00000010182smarca4a8988.344Fundulus_heteroclitus
ENSGMOG00000002649smarca4a6782.235ENSGALG00000047145SMARCA410074.958Gallus_gallus
ENSGMOG00000002649smarca4a8588.095ENSGAFG00000014900smarca4a9087.730Gambusia_affinis
ENSGMOG00000002649smarca4a8881.026ENSGAFG00000008827-8881.235Gambusia_affinis
ENSGMOG00000002649smarca4a9192.262ENSGACG00000006691smarca4a8992.025Gasterosteus_aculeatus
ENSGMOG00000002649smarca4a9272.964ENSGACG00000016033-7781.473Gasterosteus_aculeatus
ENSGMOG00000002649smarca4a8882.235ENSGAGG00000016757SMARCA49380.675Gopherus_agassizii
ENSGMOG00000002649smarca4a8781.882ENSGGOG00000009882SMARCA49380.734Gorilla_gorilla
ENSGMOG00000002649smarca4a9381.250ENSHBUG00000005447-8783.401Haplochromis_burtoni
ENSGMOG00000002649smarca4a9489.881ENSHBUG00000021172smarca4a8992.373Haplochromis_burtoni
ENSGMOG00000002649smarca4a8981.765ENSHGLG00000010519SMARCA49380.606Heterocephalus_glaber_female
ENSGMOG00000002649smarca4a8981.221ENSHGLG00100013774SMARCA49378.485Heterocephalus_glaber_male
ENSGMOG00000002649smarca4a8892.126ENSHCOG00000009510smarca4a8591.057Hippocampus_comes
ENSGMOG00000002649smarca4a9180.357ENSIPUG00000016346-7882.619Ictalurus_punctatus
ENSGMOG00000002649smarca4a9485.417ENSIPUG00000006107smarca4a8887.288Ictalurus_punctatus
ENSGMOG00000002649smarca4a8781.765ENSSTOG00000007939SMARCA49380.428Ictidomys_tridecemlineatus
ENSGMOG00000002649smarca4a8781.647ENSJJAG00000012877Smarca49180.734Jaculus_jaculus
ENSGMOG00000002649smarca4a9488.988ENSKMAG00000011931smarca4a8991.525Kryptolebias_marmoratus
ENSGMOG00000002649smarca4a8583.465ENSKMAG00000019518-9182.927Kryptolebias_marmoratus
ENSGMOG00000002649smarca4a8885.827ENSLBEG00000017383smarca4a7689.815Labrus_bergylta
ENSGMOG00000002649smarca4a8092.670ENSLBEG00000020655-8292.670Labrus_bergylta
ENSGMOG00000002649smarca4a9483.631ENSLOCG00000007820smarca4a7989.831Lepisosteus_oculatus
ENSGMOG00000002649smarca4a8781.882ENSLAFG00000001433SMARCA49380.000Loxodonta_africana
ENSGMOG00000002649smarca4a8781.882ENSMFAG00000032146SMARCA49380.243Macaca_fascicularis
ENSGMOG00000002649smarca4a8781.882ENSMMUG00000012042SMARCA49380.734Macaca_mulatta
ENSGMOG00000002649smarca4a8881.882ENSMNEG00000028512SMARCA49380.734Macaca_nemestrina
ENSGMOG00000002649smarca4a8881.882ENSMLEG00000034976SMARCA49380.243Mandrillus_leucophaeus
ENSGMOG00000002649smarca4a8885.433ENSMAMG00000002841-9184.146Mastacembelus_armatus
ENSGMOG00000002649smarca4a9490.179ENSMAMG00000009256smarca4a8894.068Mastacembelus_armatus
ENSGMOG00000002649smarca4a8885.827ENSMZEG00005023861-8782.301Maylandia_zebra
ENSGMOG00000002649smarca4a9489.881ENSMZEG00005003889smarca4a8992.373Maylandia_zebra
ENSGMOG00000002649smarca4a8781.529ENSMAUG00000020731Smarca49380.000Mesocricetus_auratus
ENSGMOG00000002649smarca4a8980.235ENSMICG00000009806SMARCA49379.939Microcebus_murinus
ENSGMOG00000002649smarca4a8781.904ENSMOCG00000022209Smarca49380.000Microtus_ochrogaster
ENSGMOG00000002649smarca4a8884.252ENSMMOG00000007571smarca4a8691.525Mola_mola
ENSGMOG00000002649smarca4a8881.176ENSMMOG00000008466-8781.473Mola_mola
ENSGMOG00000002649smarca4a8882.000ENSMODG00000006287SMARCA49180.982Monodelphis_domestica
ENSGMOG00000002649smarca4a9091.071ENSMALG00000003388smarca4a9190.492Monopterus_albus
ENSGMOG00000002649smarca4a7882.588ENSMALG00000021534-9282.660Monopterus_albus
ENSGMOG00000002649smarca4a8781.529MGP_CAROLIEiJ_G0031879Smarca49380.734Mus_caroli
ENSGMOG00000002649smarca4a8781.529ENSMUSG00000032187Smarca49380.734Mus_musculus
ENSGMOG00000002649smarca4a8881.529MGP_PahariEiJ_G0014745Smarca49380.734Mus_pahari
ENSGMOG00000002649smarca4a8781.529MGP_SPRETEiJ_G0033003Smarca49380.734Mus_spretus
ENSGMOG00000002649smarca4a8781.765ENSMPUG00000005711SMARCA49380.734Mustela_putorius_furo
ENSGMOG00000002649smarca4a8781.882ENSMLUG00000004491-9381.040Myotis_lucifugus
ENSGMOG00000002649smarca4a8881.647ENSNGAG00000021852Smarca49381.040Nannospalax_galili
ENSGMOG00000002649smarca4a8486.614ENSNBRG00000011457smarca4a7791.525Neolamprologus_brichardi
ENSGMOG00000002649smarca4a7682.941ENSNBRG00000018865-8882.898Neolamprologus_brichardi
ENSGMOG00000002649smarca4a8480.394ENSNLEG00000012389SMARCA48773.579Nomascus_leucogenys
ENSGMOG00000002649smarca4a7293.151ENSOPRG00000000885-7093.651Ochotona_princeps
ENSGMOG00000002649smarca4a9081.765ENSODEG00000017127SMARCA48682.521Octodon_degus
ENSGMOG00000002649smarca4a9490.774ENSONIG00000008196smarca4a9390.184Oreochromis_niloticus
ENSGMOG00000002649smarca4a9381.250ENSONIG00000018040-8780.122Oreochromis_niloticus
ENSGMOG00000002649smarca4a8677.817ENSOCUG00000001787SMARCA49172.281Oryctolagus_cuniculus
ENSGMOG00000002649smarca4a9486.905ENSORLG00000015452smarca4a8993.220Oryzias_latipes
ENSGMOG00000002649smarca4a8480.655ENSORLG00000003955-8779.817Oryzias_latipes
ENSGMOG00000002649smarca4a9486.905ENSORLG00020004611smarca4a8993.220Oryzias_latipes_hni
ENSGMOG00000002649smarca4a8580.655ENSORLG00020009728-8779.817Oryzias_latipes_hni
ENSGMOG00000002649smarca4a9486.905ENSORLG00015016560smarca4a8993.220Oryzias_latipes_hsok
ENSGMOG00000002649smarca4a8580.655ENSORLG00015007739-8779.817Oryzias_latipes_hsok
ENSGMOG00000002649smarca4a9280.357ENSOMEG00000016626-8779.511Oryzias_melastigma
ENSGMOG00000002649smarca4a9487.202ENSOMEG00000007486smarca4a8993.220Oryzias_melastigma
ENSGMOG00000002649smarca4a7681.882ENSOGAG00000016148SMARCA49278.571Otolemur_garnettii
ENSGMOG00000002649smarca4a8881.882ENSOARG00000017454SMARCA49380.122Ovis_aries
ENSGMOG00000002649smarca4a8781.882ENSPPAG00000043191SMARCA49380.734Pan_paniscus
ENSGMOG00000002649smarca4a8781.882ENSPPRG00000000064SMARCA49380.547Panthera_pardus
ENSGMOG00000002649smarca4a8681.882ENSPTIG00000017447SMARCA48882.521Panthera_tigris_altaica
ENSGMOG00000002649smarca4a8781.882ENSPTRG00000010488SMARCA49380.734Pan_troglodytes
ENSGMOG00000002649smarca4a8881.882ENSPANG00000011042SMARCA49380.243Papio_anubis
ENSGMOG00000002649smarca4a9485.460ENSPKIG00000007770SMARCA48885.593Paramormyrops_kingsleyae
ENSGMOG00000002649smarca4a9480.952ENSPKIG00000010087-8680.328Paramormyrops_kingsleyae
ENSGMOG00000002649smarca4a8880.941ENSPSIG00000005547SMARCA49179.448Pelodiscus_sinensis
ENSGMOG00000002649smarca4a8781.529ENSPEMG00000020389Smarca49380.000Peromyscus_maniculatus_bairdii
ENSGMOG00000002649smarca4a8882.000ENSPCIG00000017138SMARCA49380.982Phascolarctos_cinereus
ENSGMOG00000002649smarca4a9083.313ENSPFOG00000012930-8780.061Poecilia_formosa
ENSGMOG00000002649smarca4a9487.240ENSPFOG00000007892smarca4a8990.678Poecilia_formosa
ENSGMOG00000002649smarca4a9487.240ENSPLAG00000014294smarca4a8990.678Poecilia_latipinna
ENSGMOG00000002649smarca4a8983.313ENSPLAG00000018616-9179.672Poecilia_latipinna
ENSGMOG00000002649smarca4a8990.625ENSPMEG00000003725smarca4a8590.678Poecilia_mexicana
ENSGMOG00000002649smarca4a8583.858ENSPMEG00000008929-8883.135Poecilia_mexicana
ENSGMOG00000002649smarca4a8583.858ENSPREG00000014823-8383.740Poecilia_reticulata
ENSGMOG00000002649smarca4a9488.095ENSPREG00000014608smarca4a8990.678Poecilia_reticulata
ENSGMOG00000002649smarca4a8781.882ENSPPYG00000009568SMARCA49180.734Pongo_abelii
ENSGMOG00000002649smarca4a6693.382ENSPCAG00000014054SMARCA46793.382Procavia_capensis
ENSGMOG00000002649smarca4a8781.882ENSPCOG00000023011SMARCA49379.939Propithecus_coquereli
ENSGMOG00000002649smarca4a8294.444ENSPVAG00000007787SMARCA48780.734Pteropus_vampyrus
ENSGMOG00000002649smarca4a8892.913ENSPNYG00000000717smarca4a8592.373Pundamilia_nyererei
ENSGMOG00000002649smarca4a8285.490ENSPNYG00000023995-8683.401Pundamilia_nyererei
ENSGMOG00000002649smarca4a8887.402ENSPNAG00000006636-8083.117Pygocentrus_nattereri
ENSGMOG00000002649smarca4a8683.274ENSPNAG00000024136smarca4a8088.136Pygocentrus_nattereri
ENSGMOG00000002649smarca4a8781.529ENSRNOG00000009271Smarca49380.428Rattus_norvegicus
ENSGMOG00000002649smarca4a8781.882ENSRBIG00000038696SMARCA49379.939Rhinopithecus_bieti
ENSGMOG00000002649smarca4a8781.882ENSRROG00000045509SMARCA49380.428Rhinopithecus_roxellana
ENSGMOG00000002649smarca4a8681.882ENSSBOG00000026896SMARCA49281.373Saimiri_boliviensis_boliviensis
ENSGMOG00000002649smarca4a8882.374ENSSHAG00000001642SMARCA49380.675Sarcophilus_harrisii
ENSGMOG00000002649smarca4a9485.757ENSSFOG00015013823smarca48888.136Scleropages_formosus
ENSGMOG00000002649smarca4a9083.648ENSSFOG00015009921-8782.623Scleropages_formosus
ENSGMOG00000002649smarca4a9479.464ENSSMAG00000014082-8879.205Scophthalmus_maximus
ENSGMOG00000002649smarca4a9491.071ENSSMAG00000003200smarca4a9090.492Scophthalmus_maximus
ENSGMOG00000002649smarca4a8884.646ENSSDUG00000005388-8483.740Seriola_dumerili
ENSGMOG00000002649smarca4a9391.369ENSSDUG00000017298smarca4a9290.798Seriola_dumerili
ENSGMOG00000002649smarca4a8885.039ENSSLDG00000023663-9083.740Seriola_lalandi_dorsalis
ENSGMOG00000002649smarca4a9491.071ENSSLDG00000024486smarca4a8893.220Seriola_lalandi_dorsalis
ENSGMOG00000002649smarca4a5796.894ENSSARG00000013477SMARCA47296.894Sorex_araneus
ENSGMOG00000002649smarca4a8385.039ENSSPUG00000004558SMARCA49084.959Sphenodon_punctatus
ENSGMOG00000002649smarca4a9480.655ENSSPAG00000012533-8583.017Stegastes_partitus
ENSGMOG00000002649smarca4a9490.179ENSSPAG00000004248smarca4a8893.220Stegastes_partitus
ENSGMOG00000002649smarca4a8781.882ENSSSCG00000013629SMARCA49380.303Sus_scrofa
ENSGMOG00000002649smarca4a8883.465ENSTRUG00000001378SMARCA48582.520Takifugu_rubripes
ENSGMOG00000002649smarca4a7883.030ENSTRUG00000004885smarca4a7882.581Takifugu_rubripes
ENSGMOG00000002649smarca4a9475.298ENSTNIG00000004536SMARCA48976.575Tetraodon_nigroviridis
ENSGMOG00000002649smarca4a6687.562ENSTNIG00000004859-8886.387Tetraodon_nigroviridis
ENSGMOG00000002649smarca4a8881.765ENSTTRG00000009519SMARCA49175.063Tursiops_truncatus
ENSGMOG00000002649smarca4a8781.882ENSUAMG00000014661SMARCA49380.734Ursus_americanus
ENSGMOG00000002649smarca4a8781.882ENSUMAG00000022005SMARCA49280.333Ursus_maritimus
ENSGMOG00000002649smarca4a8781.882ENSVVUG00000017820SMARCA49081.040Vulpes_vulpes
ENSGMOG00000002649smarca4a9477.381ENSXETG00000009355smarca49970.600Xenopus_tropicalis
ENSGMOG00000002649smarca4a8783.075ENSXCOG00000013494-8782.898Xiphophorus_couchianus
ENSGMOG00000002649smarca4a9083.075ENSXMAG00000007030-8782.898Xiphophorus_maculatus
ENSGMOG00000002649smarca4a9488.393ENSXMAG00000006321smarca4a8991.525Xiphophorus_maculatus

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