EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000002664 (Gene tree)
Gene ID: -
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B (autoantigen La)
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 2313 bases
Position: chrGeneScaffold_2046:555033-557345
Accession: ZDB-GENE-030131-223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000002818	RRM_1	PF00076.22	3.6e-08	1	1
ENSGMOP00000002818	RRM_3	PF08777.11	1.7e-26	1	1
ENSGMOP00000002818	La	PF05383.17	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000002909	-	1197	-	ENSGMOP00000002818	398 (aa)	-	UPI00023EFE3E

Gene Model

Click here to download ENSGMOG00000002664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000002664's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000002664	ssb	99	54.902	ENSG00000138385	SSB	98	61.538	Homo_sapiens
ENSGMOG00000002664	ssb	100	72.250	ENSAPOG00000003448	ssb	99	72.250	Acanthochromis_polyacanthus
ENSGMOG00000002664	ssb	99	54.634	ENSAMEG00000010507	SSB	97	53.659	Ailuropoda_melanoleuca
ENSGMOG00000002664	ssb	92	73.442	ENSACIG00000001738	ssb	94	73.442	Amphilophus_citrinellus
ENSGMOG00000002664	ssb	100	72.000	ENSAOCG00000020398	ssb	99	72.000	Amphiprion_ocellaris
ENSGMOG00000002664	ssb	100	72.250	ENSAPEG00000020395	ssb	99	72.250	Amphiprion_percula
ENSGMOG00000002664	ssb	99	74.750	ENSATEG00000016884	ssb	98	74.750	Anabas_testudineus
ENSGMOG00000002664	ssb	100	53.753	ENSAPLG00000006109	SSB	97	53.623	Anas_platyrhynchos
ENSGMOG00000002664	ssb	99	52.088	ENSACAG00000017008	SSB	97	53.186	Anolis_carolinensis
ENSGMOG00000002664	ssb	100	49.752	ENSANAG00000027195	-	97	49.505	Aotus_nancymaae
ENSGMOG00000002664	ssb	100	69.750	ENSACLG00000010798	ssb	98	69.750	Astatotilapia_calliptera
ENSGMOG00000002664	ssb	100	57.353	ENSAMXG00000012606	ssb	99	57.598	Astyanax_mexicanus
ENSGMOG00000002664	ssb	99	56.079	ENSBTAG00000008716	SSB	97	55.335	Bos_taurus
ENSGMOG00000002664	ssb	74	35.880	WBGene00016653	C44E4.4	83	34.954	Caenorhabditis_elegans
ENSGMOG00000002664	ssb	99	55.802	ENSCJAG00000045073	SSB	97	55.062	Callithrix_jacchus
ENSGMOG00000002664	ssb	99	55.665	ENSCAFG00000012418	SSB	97	54.926	Canis_familiaris
ENSGMOG00000002664	ssb	99	55.665	ENSCAFG00020002900	SSB	97	54.926	Canis_lupus_dingo
ENSGMOG00000002664	ssb	99	52.985	ENSCHIG00000022196	-	97	52.854	Capra_hircus
ENSGMOG00000002664	ssb	99	55.831	ENSCHIG00000022624	-	97	55.087	Capra_hircus
ENSGMOG00000002664	ssb	99	54.613	ENSTSYG00000000097	SSB	97	54.115	Carlito_syrichta
ENSGMOG00000002664	ssb	99	55.335	ENSCPOG00000003338	SSB	97	55.087	Cavia_porcellus
ENSGMOG00000002664	ssb	99	55.556	ENSCCAG00000035147	SSB	97	54.815	Cebus_capucinus
ENSGMOG00000002664	ssb	73	52.508	ENSCATG00000036701	SSB	83	51.505	Cercocebus_atys
ENSGMOG00000002664	ssb	99	41.439	ENSCATG00000042909	-	96	41.191	Cercocebus_atys
ENSGMOG00000002664	ssb	99	55.335	ENSCLAG00000015617	-	97	54.839	Chinchilla_lanigera
ENSGMOG00000002664	ssb	98	51.015	ENSCSAG00000018390	-	97	50.761	Chlorocebus_sabaeus
ENSGMOG00000002664	ssb	99	55.556	ENSCSAG00000015200	SSB	86	54.815	Chlorocebus_sabaeus
ENSGMOG00000002664	ssb	99	56.328	ENSCHOG00000007763	SSB	97	55.583	Choloepus_hoffmanni
ENSGMOG00000002664	ssb	100	54.791	ENSCPBG00000006519	SSB	97	57.108	Chrysemys_picta_bellii
ENSGMOG00000002664	ssb	96	44.301	ENSCANG00000028838	-	89	43.636	Colobus_angolensis_palliatus
ENSGMOG00000002664	ssb	99	48.762	ENSCANG00000033240	-	97	48.515	Colobus_angolensis_palliatus
ENSGMOG00000002664	ssb	99	55.556	ENSCANG00000027695	SSB	97	54.815	Colobus_angolensis_palliatus
ENSGMOG00000002664	ssb	99	51.613	ENSCGRG00001024831	Ssb	97	51.478	Cricetulus_griseus_chok1gshd
ENSGMOG00000002664	ssb	99	51.613	ENSCGRG00000005387	Ssb	97	51.478	Cricetulus_griseus_crigri
ENSGMOG00000002664	ssb	100	73.383	ENSCSEG00000011599	ssb	99	73.383	Cynoglossus_semilaevis
ENSGMOG00000002664	ssb	100	71.820	ENSCVAG00000021558	ssb	99	71.820	Cyprinodon_variegatus
ENSGMOG00000002664	ssb	100	57.921	ENSDARG00000029252	ssb	99	60.247	Danio_rerio
ENSGMOG00000002664	ssb	99	55.831	ENSDNOG00000013450	SSB	97	55.335	Dasypus_novemcinctus
ENSGMOG00000002664	ssb	99	52.261	ENSDORG00000005543	Ssb	97	52.010	Dipodomys_ordii
ENSGMOG00000002664	ssb	86	35.211	FBgn0011638	La	82	36.095	Drosophila_melanogaster
ENSGMOG00000002664	ssb	50	59.406	ENSETEG00000004614	-	52	59.406	Echinops_telfairi
ENSGMOG00000002664	ssb	99	44.557	ENSEBUG00000001237	ssb	96	44.279	Eptatretus_burgeri
ENSGMOG00000002664	ssb	99	55.831	ENSEASG00005022835	SSB	97	55.087	Equus_asinus_asinus
ENSGMOG00000002664	ssb	99	55.831	ENSECAG00000018495	SSB	97	55.087	Equus_caballus
ENSGMOG00000002664	ssb	74	48.822	ENSEEUG00000008077	SSB	75	48.822	Erinaceus_europaeus
ENSGMOG00000002664	ssb	100	66.667	ENSELUG00000020929	ssb	99	66.749	Esox_lucius
ENSGMOG00000002664	ssb	99	55.693	ENSFCAG00000011601	SSB	97	55.172	Felis_catus
ENSGMOG00000002664	ssb	99	53.465	ENSFALG00000000930	SSB	97	55.419	Ficedula_albicollis
ENSGMOG00000002664	ssb	99	55.831	ENSFDAG00000000598	SSB	97	55.087	Fukomys_damarensis
ENSGMOG00000002664	ssb	75	68.404	ENSFHEG00000003268	ssb	94	68.790	Fundulus_heteroclitus
ENSGMOG00000002664	ssb	99	54.568	ENSGALG00000009677	SSB	97	54.126	Gallus_gallus
ENSGMOG00000002664	ssb	100	70.617	ENSGAFG00000002749	ssb	99	71.852	Gambusia_affinis
ENSGMOG00000002664	ssb	100	71.000	ENSGACG00000005107	ssb	99	71.000	Gasterosteus_aculeatus
ENSGMOG00000002664	ssb	100	54.300	ENSGAGG00000007807	SSB	97	56.863	Gopherus_agassizii
ENSGMOG00000002664	ssb	99	46.667	ENSGGOG00000024891	-	97	45.926	Gorilla_gorilla
ENSGMOG00000002664	ssb	55	52.402	ENSGGOG00000023471	-	89	51.092	Gorilla_gorilla
ENSGMOG00000002664	ssb	100	69.000	ENSHBUG00000006584	ssb	98	69.000	Haplochromis_burtoni
ENSGMOG00000002664	ssb	99	54.988	ENSHGLG00000017580	-	97	55.062	Heterocephalus_glaber_female
ENSGMOG00000002664	ssb	99	50.617	ENSHGLG00000004478	-	97	50.370	Heterocephalus_glaber_female
ENSGMOG00000002664	ssb	99	50.251	ENSHGLG00000005832	-	97	49.749	Heterocephalus_glaber_female
ENSGMOG00000002664	ssb	99	49.383	ENSHGLG00100008767	-	97	49.136	Heterocephalus_glaber_male
ENSGMOG00000002664	ssb	99	54.988	ENSHGLG00100003084	-	97	55.062	Heterocephalus_glaber_male
ENSGMOG00000002664	ssb	100	68.828	ENSHCOG00000019011	ssb	99	68.734	Hippocampus_comes
ENSGMOG00000002664	ssb	100	58.881	ENSIPUG00000003681	SSB	99	58.637	Ictalurus_punctatus
ENSGMOG00000002664	ssb	99	55.087	ENSSTOG00000008416	SSB	97	54.342	Ictidomys_tridecemlineatus
ENSGMOG00000002664	ssb	99	50.488	ENSJJAG00000023158	-	97	50.000	Jaculus_jaculus
ENSGMOG00000002664	ssb	91	43.169	ENSJJAG00000016250	-	94	42.350	Jaculus_jaculus
ENSGMOG00000002664	ssb	100	74.250	ENSKMAG00000017317	ssb	98	74.250	Kryptolebias_marmoratus
ENSGMOG00000002664	ssb	100	73.500	ENSLBEG00000017345	ssb	99	73.500	Labrus_bergylta
ENSGMOG00000002664	ssb	100	51.597	ENSLACG00000014056	SSB	97	51.597	Latimeria_chalumnae
ENSGMOG00000002664	ssb	100	60.688	ENSLOCG00000007933	ssb	98	61.671	Lepisosteus_oculatus
ENSGMOG00000002664	ssb	72	43.793	ENSLAFG00000026721	-	95	43.793	Loxodonta_africana
ENSGMOG00000002664	ssb	100	47.643	ENSLAFG00000028909	-	97	47.160	Loxodonta_africana
ENSGMOG00000002664	ssb	99	52.427	ENSLAFG00000000867	-	97	53.641	Loxodonta_africana
ENSGMOG00000002664	ssb	86	49.271	ENSMFAG00000041478	-	91	50.305	Macaca_fascicularis
ENSGMOG00000002664	ssb	99	55.556	ENSMFAG00000039066	SSB	97	54.815	Macaca_fascicularis
ENSGMOG00000002664	ssb	99	55.556	ENSMMUG00000023051	SSB	97	54.815	Macaca_mulatta
ENSGMOG00000002664	ssb	99	39.900	ENSMMUG00000039889	-	97	40.898	Macaca_mulatta
ENSGMOG00000002664	ssb	99	46.750	ENSMMUG00000011724	-	94	46.500	Macaca_mulatta
ENSGMOG00000002664	ssb	99	46.699	ENSMNEG00000028321	SSB	97	46.210	Macaca_nemestrina
ENSGMOG00000002664	ssb	86	49.271	ENSMNEG00000034698	-	91	50.305	Macaca_nemestrina
ENSGMOG00000002664	ssb	99	55.556	ENSMLEG00000035717	SSB	97	54.815	Mandrillus_leucophaeus
ENSGMOG00000002664	ssb	99	40.250	ENSMLEG00000042644	-	96	39.552	Mandrillus_leucophaeus
ENSGMOG00000002664	ssb	100	74.250	ENSMAMG00000004800	ssb	98	74.250	Mastacembelus_armatus
ENSGMOG00000002664	ssb	100	69.750	ENSMZEG00005005749	ssb	98	69.750	Maylandia_zebra
ENSGMOG00000002664	ssb	99	53.827	ENSMGAG00000010328	SSB	96	60.302	Meleagris_gallopavo
ENSGMOG00000002664	ssb	99	54.950	ENSMICG00000028252	-	97	54.455	Microcebus_murinus
ENSGMOG00000002664	ssb	98	50.639	ENSMICG00000033304	-	92	52.011	Microcebus_murinus
ENSGMOG00000002664	ssb	99	46.517	ENSMODG00000019271	-	97	46.384	Monodelphis_domestica
ENSGMOG00000002664	ssb	99	43.532	ENSMODG00000007027	-	97	44.527	Monodelphis_domestica
ENSGMOG00000002664	ssb	99	53.218	ENSMODG00000008227	-	97	53.995	Monodelphis_domestica
ENSGMOG00000002664	ssb	91	70.523	ENSMALG00000008045	ssb	87	71.622	Monopterus_albus
ENSGMOG00000002664	ssb	99	51.683	MGP_CAROLIEiJ_G0023629	-	92	62.162	Mus_caroli
ENSGMOG00000002664	ssb	99	51.683	ENSMUSG00000068882	Ssb	92	62.162	Mus_musculus
ENSGMOG00000002664	ssb	99	51.325	MGP_PahariEiJ_G0025081	-	92	60.811	Mus_pahari
ENSGMOG00000002664	ssb	99	51.683	MGP_SPRETEiJ_G0024551	Ssb	92	62.162	Mus_spretus
ENSGMOG00000002664	ssb	99	56.049	ENSMPUG00000000785	SSB	97	55.556	Mustela_putorius_furo
ENSGMOG00000002664	ssb	99	54.902	ENSMLUG00000016316	SSB	97	54.054	Myotis_lucifugus
ENSGMOG00000002664	ssb	100	69.327	ENSNBRG00000012661	ssb	98	69.327	Neolamprologus_brichardi
ENSGMOG00000002664	ssb	99	40.695	ENSNLEG00000028754	-	97	41.206	Nomascus_leucogenys
ENSGMOG00000002664	ssb	99	55.309	ENSNLEG00000004958	SSB	97	54.568	Nomascus_leucogenys
ENSGMOG00000002664	ssb	62	61.200	ENSMEUG00000001650	-	100	61.200	Notamacropus_eugenii
ENSGMOG00000002664	ssb	95	54.593	ENSODEG00000004202	-	99	54.068	Octodon_degus
ENSGMOG00000002664	ssb	100	69.825	ENSONIG00000008776	ssb	98	69.825	Oreochromis_niloticus
ENSGMOG00000002664	ssb	99	56.000	ENSOANG00000008543	SSB	96	57.606	Ornithorhynchus_anatinus
ENSGMOG00000002664	ssb	99	54.926	ENSOCUG00000010396	SSB	97	54.591	Oryctolagus_cuniculus
ENSGMOG00000002664	ssb	100	69.900	ENSORLG00000017208	ssb	99	69.900	Oryzias_latipes
ENSGMOG00000002664	ssb	100	69.825	ENSORLG00020022574	ssb	99	70.223	Oryzias_latipes_hni
ENSGMOG00000002664	ssb	100	70.398	ENSORLG00015016592	ssb	99	70.398	Oryzias_latipes_hsok
ENSGMOG00000002664	ssb	100	72.208	ENSOMEG00000003193	ssb	99	72.953	Oryzias_melastigma
ENSGMOG00000002664	ssb	99	53.253	ENSOGAG00000029768	SSB	97	52.542	Otolemur_garnettii
ENSGMOG00000002664	ssb	99	54.975	ENSOARG00000002906	SSB	97	55.335	Ovis_aries
ENSGMOG00000002664	ssb	99	46.667	ENSPPAG00000032427	-	93	56.667	Pan_paniscus
ENSGMOG00000002664	ssb	99	54.902	ENSPPAG00000042673	SSB	97	54.167	Pan_paniscus
ENSGMOG00000002664	ssb	88	47.458	ENSPPAG00000006189	-	89	46.893	Pan_paniscus
ENSGMOG00000002664	ssb	99	55.693	ENSPPRG00000006599	SSB	97	55.172	Panthera_pardus
ENSGMOG00000002664	ssb	99	55.941	ENSPTIG00000011021	SSB	94	55.172	Panthera_tigris_altaica
ENSGMOG00000002664	ssb	99	45.161	ENSPTRG00000042880	-	97	44.913	Pan_troglodytes
ENSGMOG00000002664	ssb	99	54.902	ENSPTRG00000012620	SSB	97	54.167	Pan_troglodytes
ENSGMOG00000002664	ssb	99	38.791	ENSPANG00000031877	-	93	38.095	Papio_anubis
ENSGMOG00000002664	ssb	99	41.709	ENSPANG00000034126	-	96	41.439	Papio_anubis
ENSGMOG00000002664	ssb	99	55.556	ENSPANG00000007440	SSB	97	54.815	Papio_anubis
ENSGMOG00000002664	ssb	99	64.750	ENSPKIG00000019325	ssb	98	65.835	Paramormyrops_kingsleyae
ENSGMOG00000002664	ssb	100	55.037	ENSPSIG00000002265	SSB	91	56.618	Pelodiscus_sinensis
ENSGMOG00000002664	ssb	81	69.725	ENSPMGG00000020075	ssb	86	72.171	Periophthalmus_magnuspinnatus
ENSGMOG00000002664	ssb	91	48.077	ENSPMAG00000002982	ssb	86	47.230	Petromyzon_marinus
ENSGMOG00000002664	ssb	99	56.188	ENSPCIG00000028591	-	97	56.188	Phascolarctos_cinereus
ENSGMOG00000002664	ssb	100	70.896	ENSPFOG00000009650	ssb	99	71.642	Poecilia_formosa
ENSGMOG00000002664	ssb	100	70.149	ENSPLAG00000020498	ssb	99	71.642	Poecilia_latipinna
ENSGMOG00000002664	ssb	100	70.647	ENSPMEG00000001051	ssb	99	71.393	Poecilia_mexicana
ENSGMOG00000002664	ssb	93	71.505	ENSPREG00000003708	ssb	96	72.118	Poecilia_reticulata
ENSGMOG00000002664	ssb	99	55.309	ENSPPYG00000012919	SSB	97	54.568	Pongo_abelii
ENSGMOG00000002664	ssb	96	52.564	ENSPCAG00000010276	SSB	99	53.827	Procavia_capensis
ENSGMOG00000002664	ssb	99	51.613	ENSPCOG00000015741	-	97	53.102	Propithecus_coquereli
ENSGMOG00000002664	ssb	99	49.010	ENSPCOG00000023189	-	97	48.515	Propithecus_coquereli
ENSGMOG00000002664	ssb	89	56.546	ENSPVAG00000006615	SSB	89	60.000	Pteropus_vampyrus
ENSGMOG00000002664	ssb	100	69.500	ENSPNYG00000006444	ssb	98	69.500	Pundamilia_nyererei
ENSGMOG00000002664	ssb	79	63.208	ENSPNAG00000011708	ssb	99	57.317	Pygocentrus_nattereri
ENSGMOG00000002664	ssb	99	50.976	ENSRNOG00000007998	Ssb	97	49.507	Rattus_norvegicus
ENSGMOG00000002664	ssb	99	50.746	ENSRNOG00000011606	AABR07061825.1	97	49.751	Rattus_norvegicus
ENSGMOG00000002664	ssb	96	47.044	ENSRBIG00000041232	-	98	47.165	Rhinopithecus_bieti
ENSGMOG00000002664	ssb	88	51.541	ENSRBIG00000041608	-	94	49.860	Rhinopithecus_bieti
ENSGMOG00000002664	ssb	99	48.157	ENSRBIG00000041972	SSB	97	48.157	Rhinopithecus_bieti
ENSGMOG00000002664	ssb	99	40.796	ENSRBIG00000029918	-	96	40.050	Rhinopithecus_bieti
ENSGMOG00000002664	ssb	88	53.782	ENSRROG00000034102	-	85	52.941	Rhinopithecus_roxellana
ENSGMOG00000002664	ssb	99	47.654	ENSRROG00000031684	-	99	47.654	Rhinopithecus_roxellana
ENSGMOG00000002664	ssb	99	45.274	ENSRROG00000007149	-	97	44.527	Rhinopithecus_roxellana
ENSGMOG00000002664	ssb	99	55.556	ENSRROG00000040346	SSB	97	54.815	Rhinopithecus_roxellana
ENSGMOG00000002664	ssb	99	55.556	ENSSBOG00000027204	SSB	97	54.815	Saimiri_boliviensis_boliviensis
ENSGMOG00000002664	ssb	99	55.446	ENSSHAG00000018062	SSB	97	55.446	Sarcophilus_harrisii
ENSGMOG00000002664	ssb	99	62.963	ENSSFOG00015000550	ssb	98	64.039	Scleropages_formosus
ENSGMOG00000002664	ssb	100	71.106	ENSSMAG00000013885	ssb	98	74.124	Scophthalmus_maximus
ENSGMOG00000002664	ssb	100	74.500	ENSSDUG00000020117	ssb	98	74.500	Seriola_dumerili
ENSGMOG00000002664	ssb	100	72.362	ENSSLDG00000002525	ssb	98	72.362	Seriola_lalandi_dorsalis
ENSGMOG00000002664	ssb	96	51.020	ENSSARG00000007747	SSB	99	50.765	Sorex_araneus
ENSGMOG00000002664	ssb	100	56.650	ENSSPUG00000012112	SSB	97	57.248	Sphenodon_punctatus
ENSGMOG00000002664	ssb	100	71.250	ENSSPAG00000005696	ssb	99	71.250	Stegastes_partitus
ENSGMOG00000002664	ssb	95	53.786	ENSSSCG00000015938	SSB	93	51.414	Sus_scrofa
ENSGMOG00000002664	ssb	99	53.941	ENSTGUG00000007942	SSB	97	55.882	Taeniopygia_guttata
ENSGMOG00000002664	ssb	100	71.250	ENSTRUG00000017839	ssb	98	71.500	Takifugu_rubripes
ENSGMOG00000002664	ssb	91	70.380	ENSTNIG00000000915	ssb	98	70.380	Tetraodon_nigroviridis
ENSGMOG00000002664	ssb	82	64.151	ENSTBEG00000009056	SSB	79	64.151	Tupaia_belangeri
ENSGMOG00000002664	ssb	99	56.079	ENSTTRG00000002152	SSB	97	55.335	Tursiops_truncatus
ENSGMOG00000002664	ssb	93	56.720	ENSUAMG00000027833	SSB	95	56.452	Ursus_americanus
ENSGMOG00000002664	ssb	99	55.446	ENSUMAG00000013907	SSB	97	54.950	Ursus_maritimus
ENSGMOG00000002664	ssb	99	55.309	ENSVPAG00000007183	SSB	97	54.815	Vicugna_pacos
ENSGMOG00000002664	ssb	99	55.419	ENSVVUG00000016573	SSB	75	54.926	Vulpes_vulpes
ENSGMOG00000002664	ssb	98	51.313	ENSXETG00000025402	ssb	96	51.551	Xenopus_tropicalis
ENSGMOG00000002664	ssb	93	68.649	ENSXCOG00000019109	ssb	96	68.649	Xiphophorus_couchianus
ENSGMOG00000002664	ssb	100	70.617	ENSXMAG00000004888	ssb	99	70.617	Xiphophorus_maculatus